Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AP003399.1-201ENST00000637534 361 ntBASIC3□□□□□ -1.93
PDGFRAP16234 MTND5P29-201ENST00000458676 1807 ntBASIC3□□□□□ -1.93
PDGFRAP16234 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3□□□□□ -1.93
PDGFRAP16234 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3□□□□□ -1.93
PDGFRAP16234 AC096644.4-201ENST00000563417 2912 ntBASIC2.99□□□□□ -1.93
PDGFRAP16234 AC026241.1-201ENST00000517873 2142 ntBASIC2.99□□□□□ -1.93
PDGFRAP16234 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
PDGFRAP16234 RPL9P7-201ENST00000330965 580 ntBASIC2.99□□□□□ -1.93
PDGFRAP16234 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
PDGFRAP16234 U3.26-201ENST00000391236 204 ntBASIC2.99□□□□□ -1.93
PDGFRAP16234 MIR888-201ENST00000401186 77 ntBASIC2.99□□□□□ -1.93
PDGFRAP16234 FCF1P10-201ENST00000407590 479 ntBASIC2.99□□□□□ -1.93
PDGFRAP16234 BX682237.1-201ENST00000415016 335 ntBASIC2.99□□□□□ -1.93
PDGFRAP16234 RAC1P6-201ENST00000423911 575 ntBASIC2.99□□□□□ -1.93
PDGFRAP16234 AL356583.2-201ENST00000426536 280 ntBASIC2.99□□□□□ -1.93
PDGFRAP16234 AC010153.1-201ENST00000432862 727 ntBASIC2.99□□□□□ -1.93
PDGFRAP16234 MTND1P28-201ENST00000435623 950 ntBASIC2.99□□□□□ -1.93
PDGFRAP16234 SNRPEP9-201ENST00000436794 238 ntBASIC2.99□□□□□ -1.93
PDGFRAP16234 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.99□□□□□ -1.93
PDGFRAP16234 AC107083.1-201ENST00000439643 279 ntBASIC2.99□□□□□ -1.93
PDGFRAP16234 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.99□□□□□ -1.93
PDGFRAP16234 USP9YP12-201ENST00000450481 570 ntBASIC2.99□□□□□ -1.93
PDGFRAP16234 SSXP1-201ENST00000453640 473 ntBASIC2.99□□□□□ -1.93
PDGFRAP16234 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.99□□□□□ -1.93
PDGFRAP16234 AC096576.1-201ENST00000489014 359 ntBASIC2.99□□□□□ -1.93
PDGFRAP16234 AC097462.2-201ENST00000504623 481 ntBASIC2.99□□□□□ -1.93
PDGFRAP16234 SEM1P1-201ENST00000506694 209 ntBASIC2.99□□□□□ -1.93
PDGFRAP16234 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.99□□□□□ -1.93
PDGFRAP16234 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.99□□□□□ -1.93
PDGFRAP16234 AC010620.2-201ENST00000600135 313 ntBASIC2.99□□□□□ -1.93
PDGFRAP16234 AC012065.4-201ENST00000602445 679 ntBASIC2.99□□□□□ -1.93
PDGFRAP16234 AL670379.6-201ENST00000603753 252 ntBASIC2.99□□□□□ -1.93
PDGFRAP16234 AC098826.3-201ENST00000603823 466 ntBASIC2.99□□□□□ -1.93
PDGFRAP16234 AL670379.11-201ENST00000604059 253 ntBASIC2.99□□□□□ -1.93
PDGFRAP16234 AL161798.1-201ENST00000604630 131 ntBASIC2.99□□□□□ -1.93
PDGFRAP16234 AC008162.1-201ENST00000604718 254 ntBASIC2.99□□□□□ -1.93
PDGFRAP16234 AL670379.1-201ENST00000604752 252 ntBASIC2.99□□□□□ -1.93
PDGFRAP16234 AL033523.1-201ENST00000605153 153 ntBASIC2.99□□□□□ -1.93
PDGFRAP16234 AP000860.1-201ENST00000605250 559 ntBASIC2.99□□□□□ -1.93
PDGFRAP16234 AL670379.5-201ENST00000605253 252 ntBASIC2.99□□□□□ -1.93
PDGFRAP16234 AL670379.12-201ENST00000605291 253 ntBASIC2.99□□□□□ -1.93
PDGFRAP16234 AL670379.8-201ENST00000605353 252 ntBASIC2.99□□□□□ -1.93
PDGFRAP16234 AL670379.7-201ENST00000605823 252 ntBASIC2.99□□□□□ -1.93
PDGFRAP16234 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
PDGFRAP16234 AC010338.1-201ENST00000621823 717 ntBASIC2.99□□□□□ -1.93
PDGFRAP16234 FRG1KP-201ENST00000623592 341 ntBASIC2.99□□□□□ -1.93
PDGFRAP16234 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.99□□□□□ -1.93
PDGFRAP16234 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.99□□□□□ -1.93
PDGFRAP16234 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.99□□□□□ -1.93
PDGFRAP16234 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.99□□□□□ -1.93
PDGFRAP16234 AL359693.1-201ENST00000614959 2407 ntBASIC2.99□□□□□ -1.93
PDGFRAP16234 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
PDGFRAP16234 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
PDGFRAP16234 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
PDGFRAP16234 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
PDGFRAP16234 RNU1-105P-201ENST00000363470 161 ntBASIC2.98□□□□□ -1.93
PDGFRAP16234 SNORA80A-201ENST00000363922 136 ntBASIC2.98□□□□□ -1.93
PDGFRAP16234 RNU6-14P-201ENST00000384630 106 ntBASIC2.98□□□□□ -1.93
PDGFRAP16234 MIR181A2-201ENST00000384863 110 ntBASIC2.98□□□□□ -1.93
PDGFRAP16234 RNA5SP344-201ENST00000411081 104 ntBASIC2.98□□□□□ -1.93
PDGFRAP16234 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.98□□□□□ -1.93
PDGFRAP16234 MTND2P18-201ENST00000419962 1030 ntBASIC2.98□□□□□ -1.93
PDGFRAP16234 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.98□□□□□ -1.93
PDGFRAP16234 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.98□□□□□ -1.93
PDGFRAP16234 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.98□□□□□ -1.93
PDGFRAP16234 RPS29P6-201ENST00000438196 145 ntBASIC2.98□□□□□ -1.93
PDGFRAP16234 COX6CP12-201ENST00000446748 202 ntBASIC2.98□□□□□ -1.93
PDGFRAP16234 NIPA2P5-201ENST00000452282 464 ntBASIC2.98□□□□□ -1.93
PDGFRAP16234 RPL12P25-201ENST00000455592 494 ntBASIC2.98□□□□□ -1.93
PDGFRAP16234 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.98□□□□□ -1.93
PDGFRAP16234 AL049873.1-201ENST00000480540 376 ntBASIC2.98□□□□□ -1.93
PDGFRAP16234 FABP5P5-201ENST00000515537 406 ntBASIC2.98□□□□□ -1.93
PDGFRAP16234 SCARNA13-201ENST00000516672 275 ntBASIC2.98□□□□□ -1.93
PDGFRAP16234 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.98□□□□□ -1.93
PDGFRAP16234 HPRT1P3-201ENST00000539521 576 ntBASIC2.98□□□□□ -1.93
PDGFRAP16234 ARL2BPP2-201ENST00000550907 489 ntBASIC2.98□□□□□ -1.93
PDGFRAP16234 MRPS36P5-201ENST00000551909 298 ntBASIC2.98□□□□□ -1.93
PDGFRAP16234 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.98□□□□□ -1.93
PDGFRAP16234 AC008739.2-201ENST00000597006 317 ntBASIC2.98□□□□□ -1.93
PDGFRAP16234 AC112191.3-201ENST00000604371 277 ntBASIC2.98□□□□□ -1.93
PDGFRAP16234 AC006338.1-201ENST00000618453 749 ntBASIC2.98□□□□□ -1.93
PDGFRAP16234 AC019226.2-201ENST00000625973 424 ntBASIC2.98□□□□□ -1.93
PDGFRAP16234 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.98□□□□□ -1.93
PDGFRAP16234 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
PDGFRAP16234 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PDGFRAP16234 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
PDGFRAP16234 AL137003.2-201ENST00000606924 2538 ntBASIC2.97□□□□□ -1.93
PDGFRAP16234 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.97□□□□□ -1.93
PDGFRAP16234 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.97□□□□□ -1.93
PDGFRAP16234 RNU1-109P-201ENST00000383960 147 ntBASIC2.97□□□□□ -1.93
PDGFRAP16234 RNU6-701P-201ENST00000384059 107 ntBASIC2.97□□□□□ -1.93
PDGFRAP16234 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
PDGFRAP16234 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.97□□□□□ -1.93
PDGFRAP16234 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.97□□□□□ -1.93
PDGFRAP16234 AC093151.1-201ENST00000427711 313 ntBASIC2.97□□□□□ -1.93
PDGFRAP16234 HMGB1P27-201ENST00000431429 603 ntBASIC2.97□□□□□ -1.93
PDGFRAP16234 AL135938.1-201ENST00000443141 297 ntBASIC2.97□□□□□ -1.93
PDGFRAP16234 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.97□□□□□ -1.93
PDGFRAP16234 RN7SL432P-201ENST00000484057 298 ntBASIC2.97□□□□□ -1.93
PDGFRAP16234 AC114786.4-201ENST00000508771 728 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms