Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDH1P12830 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CDH1P12830 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CDH1P12830 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CDH1P12830 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CDH1P12830 Y_RNA.38-201ENST00000362617 102 ntBASIC3.17□□□□□ -1.9
CDH1P12830 Y_RNA.295-201ENST00000364918 102 ntBASIC3.17□□□□□ -1.9
CDH1P12830 SNORA23-201ENST00000365128 182 ntBASIC3.17□□□□□ -1.9
CDH1P12830 MIR7-3-201ENST00000384898 110 ntBASIC3.17□□□□□ -1.9
CDH1P12830 RNA5SP171-201ENST00000391071 115 ntBASIC3.17□□□□□ -1.9
CDH1P12830 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CDH1P12830 AL359634.1-202ENST00000404721 284 ntBASIC3.17□□□□□ -1.9
CDH1P12830 AP000567.1-201ENST00000406413 156 ntBASIC3.17□□□□□ -1.9
CDH1P12830 MRPL50P2-201ENST00000416821 482 ntBASIC3.17□□□□□ -1.9
CDH1P12830 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH1P12830 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH1P12830 MTATP6P4-201ENST00000427725 675 ntBASIC3.17□□□□□ -1.9
CDH1P12830 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.17□□□□□ -1.9
CDH1P12830 MTATP6P16-201ENST00000434543 526 ntBASIC3.17□□□□□ -1.9
CDH1P12830 AL121871.1-201ENST00000443413 436 ntBASIC3.17□□□□□ -1.9
CDH1P12830 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH1P12830 RPS24P6-201ENST00000452670 400 ntBASIC3.17□□□□□ -1.9
CDH1P12830 PRSS3P4-201ENST00000453323 162 ntBASIC3.17□□□□□ -1.9
CDH1P12830 AC010631.1-201ENST00000474150 156 ntBASIC3.17□□□□□ -1.9
CDH1P12830 RPS27AP1-201ENST00000475545 471 ntBASIC3.17□□□□□ -1.9
CDH1P12830 AC108860.1-201ENST00000484521 383 ntBASIC3.17□□□□□ -1.9
CDH1P12830 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH1P12830 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.17□□□□□ -1.9
CDH1P12830 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.17□□□□□ -1.9
CDH1P12830 RNA5SP385-201ENST00000515947 110 ntBASIC3.17□□□□□ -1.9
CDH1P12830 RNA5SP217-201ENST00000515959 91 ntBASIC3.17□□□□□ -1.9
CDH1P12830 SNORA40.12-201ENST00000516329 111 ntBASIC3.17□□□□□ -1.9
CDH1P12830 RNU6-835P-201ENST00000516974 104 ntBASIC3.17□□□□□ -1.9
CDH1P12830 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH1P12830 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH1P12830 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CDH1P12830 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.17□□□□□ -1.9
CDH1P12830 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.17□□□□□ -1.9
CDH1P12830 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.17□□□□□ -1.9
CDH1P12830 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH1P12830 AP005205.1-201ENST00000563503 508 ntBASIC3.17□□□□□ -1.9
CDH1P12830 AC034105.3-201ENST00000565294 442 ntBASIC3.17□□□□□ -1.9
CDH1P12830 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH1P12830 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH1P12830 AC008536.2-201ENST00000607284 349 ntBASIC3.17□□□□□ -1.9
CDH1P12830 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CDH1P12830 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.17□□□□□ -1.9
CDH1P12830 MIR7975-201ENST00000619350 68 ntBASIC3.17□□□□□ -1.9
CDH1P12830 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.17□□□□□ -1.9
CDH1P12830 MIR6075-201ENST00000620782 95 ntBASIC3.17□□□□□ -1.9
CDH1P12830 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.17□□□□□ -1.9
CDH1P12830 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.17□□□□□ -1.9
CDH1P12830 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDH1P12830 AC004925.1-201ENST00000624256 2706 ntBASIC3.17□□□□□ -1.9
CDH1P12830 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.16□□□□□ -1.9
CDH1P12830 AC009812.4-201ENST00000569134 1805 ntBASIC3.16□□□□□ -1.9
CDH1P12830 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDH1P12830 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDH1P12830 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDH1P12830 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CDH1P12830 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDH1P12830 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.16□□□□□ -1.9
CDH1P12830 RNU6-76P-201ENST00000384060 104 ntBASIC3.16□□□□□ -1.9
CDH1P12830 RNU6-606P-201ENST00000384721 111 ntBASIC3.16□□□□□ -1.9
CDH1P12830 Y_RNA.573-201ENST00000384763 105 ntBASIC3.16□□□□□ -1.9
CDH1P12830 AC110754.1-201ENST00000399740 601 ntBASIC3.16□□□□□ -1.9
CDH1P12830 AC022028.1-201ENST00000412054 408 ntBASIC3.16□□□□□ -1.9
CDH1P12830 AC063979.1-201ENST00000415539 377 ntBASIC3.16□□□□□ -1.9
CDH1P12830 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.16□□□□□ -1.9
CDH1P12830 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH1P12830 BNIP3P2-201ENST00000441221 577 ntBASIC3.16□□□□□ -1.9
CDH1P12830 AC016691.1-201ENST00000441321 413 ntBASIC3.16□□□□□ -1.9
CDH1P12830 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH1P12830 DPPA3P1-201ENST00000448050 469 ntBASIC3.16□□□□□ -1.9
CDH1P12830 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.16□□□□□ -1.9
CDH1P12830 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH1P12830 snoU13.24-201ENST00000458998 104 ntBASIC3.16□□□□□ -1.9
CDH1P12830 SNORD97-201ENST00000459187 142 ntBASIC3.16□□□□□ -1.9
CDH1P12830 AC010285.1-201ENST00000470580 392 ntBASIC3.16□□□□□ -1.9
CDH1P12830 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CDH1P12830 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.16□□□□□ -1.9
CDH1P12830 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH1P12830 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.16□□□□□ -1.9
CDH1P12830 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH1P12830 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH1P12830 AP001646.1-201ENST00000527936 915 ntBASIC3.16□□□□□ -1.9
CDH1P12830 AC118273.2-201ENST00000532092 465 ntBASIC3.16□□□□□ -1.9
CDH1P12830 OR5BN1P-201ENST00000532955 829 ntBASIC3.16□□□□□ -1.9
CDH1P12830 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.16□□□□□ -1.9
CDH1P12830 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.16□□□□□ -1.9
CDH1P12830 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH1P12830 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.16□□□□□ -1.9
CDH1P12830 MIR4506-201ENST00000584693 77 ntBASIC3.16□□□□□ -1.9
CDH1P12830 AL162413.1-201ENST00000603198 110 ntBASIC3.16□□□□□ -1.9
CDH1P12830 AC012443.1-201ENST00000605605 231 ntBASIC3.16□□□□□ -1.9
CDH1P12830 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.16□□□□□ -1.9
CDH1P12830 AC093648.1-201ENST00000623546 606 ntBASIC3.16□□□□□ -1.9
CDH1P12830 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.16□□□□□ -1.9
CDH1P12830 FER-210ENST00000628534 558 ntTSL 5 BASIC3.16□□□□□ -1.9
CDH1P12830 AC099654.14-201ENST00000638599 341 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 147.5 ms