Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 U4.5-201ENST00000617137 123 ntBASIC3.33□□□□□ -1.88
PCNAP12004 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.33□□□□□ -1.88
PCNAP12004 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCNAP12004 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
PCNAP12004 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.32□□□□□ -1.88
PCNAP12004 RNU6-1085P-201ENST00000363576 107 ntBASIC3.32□□□□□ -1.88
PCNAP12004 RNU6-61P-201ENST00000365528 109 ntBASIC3.32□□□□□ -1.88
PCNAP12004 RNU6-483P-201ENST00000384088 108 ntBASIC3.32□□□□□ -1.88
PCNAP12004 MIR325-201ENST00000385260 98 ntBASIC3.32□□□□□ -1.88
PCNAP12004 RNU6-1158P-201ENST00000391167 107 ntBASIC3.32□□□□□ -1.88
PCNAP12004 RNU6-1077P-201ENST00000410506 102 ntBASIC3.32□□□□□ -1.88
PCNAP12004 Z85995.1-201ENST00000415547 335 ntBASIC3.32□□□□□ -1.88
PCNAP12004 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.32□□□□□ -1.88
PCNAP12004 BX842559.1-201ENST00000419615 532 ntBASIC3.32□□□□□ -1.88
PCNAP12004 EIF1P1-201ENST00000421436 341 ntBASIC3.32□□□□□ -1.88
PCNAP12004 NDUFB4P7-201ENST00000423198 363 ntBASIC3.32□□□□□ -1.88
PCNAP12004 AC092573.2-201ENST00000434546 243 ntBASIC3.32□□□□□ -1.88
PCNAP12004 HSPD1P21-201ENST00000436541 245 ntBASIC3.32□□□□□ -1.88
PCNAP12004 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.32□□□□□ -1.88
PCNAP12004 RPL21P133-201ENST00000443666 476 ntBASIC3.32□□□□□ -1.88
PCNAP12004 AL133547.1-201ENST00000448546 220 ntBASIC3.32□□□□□ -1.88
PCNAP12004 FABP5P13-201ENST00000452144 328 ntBASIC3.32□□□□□ -1.88
PCNAP12004 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.32□□□□□ -1.88
PCNAP12004 AL162395.1-201ENST00000457882 422 ntBASIC3.32□□□□□ -1.88
PCNAP12004 RPL23AP67-201ENST00000465341 474 ntBASIC3.32□□□□□ -1.88
PCNAP12004 RPS23P3-201ENST00000470993 430 ntBASIC3.32□□□□□ -1.88
PCNAP12004 AC025518.1-201ENST00000479856 347 ntBASIC3.32□□□□□ -1.88
PCNAP12004 AC092989.1-201ENST00000481235 277 ntBASIC3.32□□□□□ -1.88
PCNAP12004 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.32□□□□□ -1.88
PCNAP12004 RBBP4P6-201ENST00000508098 202 ntBASIC3.32□□□□□ -1.88
PCNAP12004 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.32□□□□□ -1.88
PCNAP12004 MIR2276-201ENST00000516886 89 ntBASIC3.32□□□□□ -1.88
PCNAP12004 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.32□□□□□ -1.88
PCNAP12004 RPS3AP4-201ENST00000555161 764 ntBASIC3.32□□□□□ -1.88
PCNAP12004 ZNF519P2-201ENST00000557032 169 ntBASIC3.32□□□□□ -1.88
PCNAP12004 NCAPGP2-201ENST00000557911 754 ntBASIC3.32□□□□□ -1.88
PCNAP12004 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.32□□□□□ -1.88
PCNAP12004 HMGB1P33-201ENST00000563485 527 ntBASIC3.32□□□□□ -1.88
PCNAP12004 AC034105.3-201ENST00000565294 442 ntBASIC3.32□□□□□ -1.88
PCNAP12004 AC006130.2-201ENST00000586202 326 ntBASIC3.32□□□□□ -1.88
PCNAP12004 AC130324.3-201ENST00000614165 542 ntBASIC3.32□□□□□ -1.88
PCNAP12004 AC068831.7-201ENST00000616954 363 ntBASIC3.32□□□□□ -1.88
PCNAP12004 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.32□□□□□ -1.88
PCNAP12004 AC025034.2-201ENST00000623264 286 ntBASIC3.32□□□□□ -1.88
PCNAP12004 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.32□□□□□ -1.88
PCNAP12004 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PCNAP12004 MTND5P7-201ENST00000413558 1798 ntBASIC3.32□□□□□ -1.88
PCNAP12004 MFSD8-233ENST00000641482 4860 ntBASIC3.32□□□□□ -1.88
PCNAP12004 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCNAP12004 AC008568.2-201ENST00000623862 2313 ntBASIC3.31□□□□□ -1.88
PCNAP12004 AC032011.1-201ENST00000611703 1549 ntBASIC3.31□□□□□ -1.88
PCNAP12004 API5P2-201ENST00000397055 1498 ntBASIC3.31□□□□□ -1.88
PCNAP12004 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCNAP12004 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
PCNAP12004 DYNLT3P1-201ENST00000378574 347 ntBASIC3.31□□□□□ -1.88
PCNAP12004 MIR454-201ENST00000390180 115 ntBASIC3.31□□□□□ -1.88
PCNAP12004 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.31□□□□□ -1.88
PCNAP12004 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.31□□□□□ -1.88
PCNAP12004 ZNF90P2-204ENST00000419323 1075 ntBASIC3.31□□□□□ -1.88
PCNAP12004 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.31□□□□□ -1.88
PCNAP12004 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.31□□□□□ -1.88
PCNAP12004 SNRPEP4-201ENST00000435815 279 ntBASIC3.31□□□□□ -1.88
PCNAP12004 RPL23AP22-201ENST00000437556 453 ntBASIC3.31□□□□□ -1.88
PCNAP12004 MTATP6P13-201ENST00000438531 667 ntBASIC3.31□□□□□ -1.88
PCNAP12004 CBWD4P-201ENST00000445695 655 ntBASIC3.31□□□□□ -1.88
PCNAP12004 AC003071.1-201ENST00000451219 789 ntBASIC3.31□□□□□ -1.88
PCNAP12004 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
PCNAP12004 AC233702.1-201ENST00000482905 502 ntBASIC3.31□□□□□ -1.88
PCNAP12004 AC106707.2-201ENST00000484182 374 ntBASIC3.31□□□□□ -1.88
PCNAP12004 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.31□□□□□ -1.88
PCNAP12004 AL117351.2-201ENST00000513571 157 ntBASIC3.31□□□□□ -1.88
PCNAP12004 SNORA31.3-201ENST00000516029 96 ntBASIC3.31□□□□□ -1.88
PCNAP12004 Y_RNA.693-201ENST00000516641 110 ntBASIC3.31□□□□□ -1.88
PCNAP12004 AC107934.2-201ENST00000518653 310 ntBASIC3.31□□□□□ -1.88
PCNAP12004 AP001804.3-201ENST00000525146 880 ntBASIC3.31□□□□□ -1.88
PCNAP12004 OR5AQ1P-201ENST00000527596 927 ntBASIC3.31□□□□□ -1.88
PCNAP12004 AC104383.1-201ENST00000530297 370 ntBASIC3.31□□□□□ -1.88
PCNAP12004 OR5B10P-201ENST00000532869 642 ntBASIC3.31□□□□□ -1.88
PCNAP12004 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.31□□□□□ -1.88
PCNAP12004 AP005205.1-201ENST00000563503 508 ntBASIC3.31□□□□□ -1.88
PCNAP12004 MTATP6P3-201ENST00000581686 676 ntBASIC3.31□□□□□ -1.88
PCNAP12004 AP001330.5-201ENST00000607176 411 ntBASIC3.31□□□□□ -1.88
PCNAP12004 AC093788.1-201ENST00000609356 927 ntBASIC3.31□□□□□ -1.88
PCNAP12004 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.31□□□□□ -1.88
PCNAP12004 U6atac.1-201ENST00000616025 117 ntBASIC3.31□□□□□ -1.88
PCNAP12004 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.31□□□□□ -1.88
PCNAP12004 AC009093.8-201ENST00000641769 292 ntBASIC3.31□□□□□ -1.88
PCNAP12004 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.31□□□□□ -1.88
PCNAP12004 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
PCNAP12004 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.3□□□□□ -1.88
PCNAP12004 RNU6-179P-201ENST00000363350 107 ntBASIC3.3□□□□□ -1.88
PCNAP12004 RNU4-48P-201ENST00000365559 182 ntBASIC3.3□□□□□ -1.88
PCNAP12004 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
PCNAP12004 MIR218-2-201ENST00000385006 110 ntBASIC3.3□□□□□ -1.88
PCNAP12004 BTF3P7-201ENST00000407097 488 ntBASIC3.3□□□□□ -1.88
PCNAP12004 AC126124.2-201ENST00000413542 321 ntBASIC3.3□□□□□ -1.88
PCNAP12004 Z99755.1-201ENST00000414048 380 ntBASIC3.3□□□□□ -1.88
PCNAP12004 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.3□□□□□ -1.88
PCNAP12004 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.3□□□□□ -1.88
PCNAP12004 USP9YP18-201ENST00000425912 695 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms