Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC107982.1-201ENST00000507171 1300 ntBASIC2.68□□□□□ -1.98
TOP1P11387 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.67□□□□□ -1.98
TOP1P11387 SNORA67.1-201ENST00000364749 141 ntBASIC2.67□□□□□ -1.98
TOP1P11387 RNU6-621P-201ENST00000364752 109 ntBASIC2.67□□□□□ -1.98
TOP1P11387 AC119751.3-201ENST00000399720 670 ntBASIC2.67□□□□□ -1.98
TOP1P11387 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.67□□□□□ -1.98
TOP1P11387 SEPT2P1-201ENST00000419651 180 ntBASIC2.67□□□□□ -1.98
TOP1P11387 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.67□□□□□ -1.98
TOP1P11387 AC010099.3-201ENST00000423896 409 ntBASIC2.67□□□□□ -1.98
TOP1P11387 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.67□□□□□ -1.98
TOP1P11387 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.67□□□□□ -1.98
TOP1P11387 AC098826.2-201ENST00000452011 651 ntBASIC2.67□□□□□ -1.98
TOP1P11387 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.67□□□□□ -1.98
TOP1P11387 HSPE1P23-201ENST00000509838 286 ntBASIC2.67□□□□□ -1.98
TOP1P11387 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.67□□□□□ -1.98
TOP1P11387 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.67□□□□□ -1.98
TOP1P11387 RNA5SP291-201ENST00000517222 105 ntBASIC2.67□□□□□ -1.98
TOP1P11387 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.67□□□□□ -1.98
TOP1P11387 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.67□□□□□ -1.98
TOP1P11387 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.67□□□□□ -1.98
TOP1P11387 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.67□□□□□ -1.98
TOP1P11387 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
TOP1P11387 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.67□□□□□ -1.98
TOP1P11387 HIGD1AP17-201ENST00000554576 276 ntBASIC2.67□□□□□ -1.98
TOP1P11387 AC009094.1-201ENST00000564443 426 ntBASIC2.67□□□□□ -1.98
TOP1P11387 AC023824.2-201ENST00000566185 400 ntBASIC2.67□□□□□ -1.98
TOP1P11387 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.67□□□□□ -1.98
TOP1P11387 AC069304.2-201ENST00000605154 435 ntBASIC2.67□□□□□ -1.98
TOP1P11387 AC097478.2-201ENST00000610572 514 ntBASIC2.67□□□□□ -1.98
TOP1P11387 AC011890.2-201ENST00000613393 294 ntBASIC2.67□□□□□ -1.98
TOP1P11387 AL449363.1-201ENST00000617815 186 ntBASIC2.67□□□□□ -1.98
TOP1P11387 MIR6766-201ENST00000622641 72 ntBASIC2.67□□□□□ -1.98
TOP1P11387 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.67□□□□□ -1.98
TOP1P11387 AC120349.3-201ENST00000624377 529 ntBASIC2.67□□□□□ -1.98
TOP1P11387 AC019226.2-201ENST00000625973 424 ntBASIC2.67□□□□□ -1.98
TOP1P11387 AC116618.1-201ENST00000634617 774 ntBASIC2.67□□□□□ -1.98
TOP1P11387 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.67□□□□□ -1.98
TOP1P11387 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
TOP1P11387 RPL21P132-201ENST00000331267 462 ntBASIC2.66□□□□□ -1.98
TOP1P11387 FAM133CP-201ENST00000332869 704 ntBASIC2.66□□□□□ -1.98
TOP1P11387 RNU6-28P-201ENST00000362378 107 ntBASIC2.66□□□□□ -1.98
TOP1P11387 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.66□□□□□ -1.98
TOP1P11387 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.66□□□□□ -1.98
TOP1P11387 U3.37-201ENST00000408528 213 ntBASIC2.66□□□□□ -1.98
TOP1P11387 RNU6-757P-201ENST00000410334 100 ntBASIC2.66□□□□□ -1.98
TOP1P11387 RNA5SP425-201ENST00000410336 112 ntBASIC2.66□□□□□ -1.98
TOP1P11387 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.66□□□□□ -1.98
TOP1P11387 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.66□□□□□ -1.98
TOP1P11387 RPL7P34-201ENST00000433316 712 ntBASIC2.66□□□□□ -1.98
TOP1P11387 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.66□□□□□ -1.98
TOP1P11387 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.66□□□□□ -1.98
TOP1P11387 RPS20P20-201ENST00000460498 340 ntBASIC2.66□□□□□ -1.98
TOP1P11387 MTCO2P6-201ENST00000463134 685 ntBASIC2.66□□□□□ -1.98
TOP1P11387 MRPS17P3-201ENST00000465453 385 ntBASIC2.66□□□□□ -1.98
TOP1P11387 AC090096.1-201ENST00000489168 390 ntBASIC2.66□□□□□ -1.98
TOP1P11387 ANXA2P1-201ENST00000505539 926 ntBASIC2.66□□□□□ -1.98
TOP1P11387 RNU1-41P-201ENST00000516161 162 ntBASIC2.66□□□□□ -1.98
TOP1P11387 RNU1-48P-201ENST00000516400 162 ntBASIC2.66□□□□□ -1.98
TOP1P11387 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.66□□□□□ -1.98
TOP1P11387 MTCYBP20-201ENST00000524239 1129 ntBASIC2.66□□□□□ -1.98
TOP1P11387 MTATP6P15-201ENST00000527233 835 ntBASIC2.66□□□□□ -1.98
TOP1P11387 ZNF321P-202ENST00000550843 495 ntBASIC2.66□□□□□ -1.98
TOP1P11387 DUXAP1-201ENST00000556632 463 ntBASIC2.66□□□□□ -1.98
TOP1P11387 MTND3P12-201ENST00000559068 328 ntBASIC2.66□□□□□ -1.98
TOP1P11387 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.66□□□□□ -1.98
TOP1P11387 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.66□□□□□ -1.98
TOP1P11387 MIR4658-201ENST00000584344 65 ntBASIC2.66□□□□□ -1.98
TOP1P11387 MIR4298-201ENST00000584380 73 ntBASIC2.66□□□□□ -1.98
TOP1P11387 HMGN2P15-201ENST00000585707 270 ntBASIC2.66□□□□□ -1.98
TOP1P11387 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.66□□□□□ -1.98
TOP1P11387 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.66□□□□□ -1.98
TOP1P11387 AL139344.1-201ENST00000605228 195 ntBASIC2.66□□□□□ -1.98
TOP1P11387 AL390208.1-201ENST00000605885 644 ntBASIC2.66□□□□□ -1.98
TOP1P11387 AC008498.1-201ENST00000613012 531 ntBASIC2.66□□□□□ -1.98
TOP1P11387 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.66□□□□□ -1.98
TOP1P11387 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
TOP1P11387 SNORA70B-201ENST00000384210 135 ntBASIC2.65□□□□□ -1.99
TOP1P11387 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
TOP1P11387 RN7SKP223-201ENST00000410582 62 ntBASIC2.65□□□□□ -1.99
TOP1P11387 AF274854.1-201ENST00000413236 615 ntBASIC2.65□□□□□ -1.99
TOP1P11387 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.65□□□□□ -1.99
TOP1P11387 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.65□□□□□ -1.99
TOP1P11387 UBE2D3P1-201ENST00000436669 444 ntBASIC2.65□□□□□ -1.99
TOP1P11387 TRGVB-201ENST00000453257 471 ntBASIC2.65□□□□□ -1.99
TOP1P11387 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.65□□□□□ -1.99
TOP1P11387 RPL18AP17-201ENST00000455326 198 ntBASIC2.65□□□□□ -1.99
TOP1P11387 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.65□□□□□ -1.99
TOP1P11387 RNU7-26P-201ENST00000458980 63 ntBASIC2.65□□□□□ -1.99
TOP1P11387 MTND2P14-201ENST00000482139 351 ntBASIC2.65□□□□□ -1.99
TOP1P11387 HMGB1P28-201ENST00000507778 552 ntBASIC2.65□□□□□ -1.99
TOP1P11387 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.65□□□□□ -1.99
TOP1P11387 RNY4P37-201ENST00000516225 96 ntBASIC2.65□□□□□ -1.99
TOP1P11387 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.65□□□□□ -1.99
TOP1P11387 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.65□□□□□ -1.99
TOP1P11387 SNRPGP18-201ENST00000553000 214 ntBASIC2.65□□□□□ -1.99
TOP1P11387 AC078814.3-201ENST00000553036 491 ntBASIC2.65□□□□□ -1.99
TOP1P11387 AL354943.1-201ENST00000572103 781 ntBASIC2.65□□□□□ -1.99
TOP1P11387 OR4K7P-201ENST00000580232 945 ntBASIC2.65□□□□□ -1.99
TOP1P11387 AL353778.1-201ENST00000603149 408 ntBASIC2.65□□□□□ -1.99
TOP1P11387 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms