Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DOAP06340 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
HLA-DOAP06340 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DOAP06340 AL133383.2-201ENST00000622958 2336 ntBASIC4.07□□□□□ -1.76
HLA-DOAP06340 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.07□□□□□ -1.76
HLA-DOAP06340 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DOAP06340 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DOAP06340 TAB3P1-202ENST00000452645 1634 ntBASIC4.07□□□□□ -1.76
HLA-DOAP06340 AC027287.1-201ENST00000553115 1453 ntBASIC4.07□□□□□ -1.76
HLA-DOAP06340 MTND4P14-201ENST00000435799 1354 ntBASIC4.07□□□□□ -1.76
HLA-DOAP06340 Y_RNA.378-201ENST00000365652 113 ntBASIC4.07□□□□□ -1.76
HLA-DOAP06340 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
HLA-DOAP06340 AL606923.1-201ENST00000406616 190 ntBASIC4.07□□□□□ -1.76
HLA-DOAP06340 RNU4-26P-201ENST00000410270 107 ntBASIC4.07□□□□□ -1.76
HLA-DOAP06340 RNU2-39P-201ENST00000410604 198 ntBASIC4.07□□□□□ -1.76
HLA-DOAP06340 RNU6-516P-201ENST00000411381 104 ntBASIC4.07□□□□□ -1.76
HLA-DOAP06340 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DOAP06340 HSPE1P1-201ENST00000421494 318 ntBASIC4.07□□□□□ -1.76
HLA-DOAP06340 SAR1AP4-201ENST00000429225 591 ntBASIC4.07□□□□□ -1.76
HLA-DOAP06340 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.07□□□□□ -1.76
HLA-DOAP06340 NDUFA5P4-201ENST00000436704 385 ntBASIC4.07□□□□□ -1.76
HLA-DOAP06340 AL591623.2-201ENST00000449978 222 ntBASIC4.07□□□□□ -1.76
HLA-DOAP06340 MTND1P9-201ENST00000453775 944 ntBASIC4.07□□□□□ -1.76
HLA-DOAP06340 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DOAP06340 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DOAP06340 RNU7-180P-201ENST00000459240 63 ntBASIC4.07□□□□□ -1.76
HLA-DOAP06340 SNORD19B-201ENST00000459623 84 ntBASIC4.07□□□□□ -1.76
HLA-DOAP06340 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DOAP06340 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DOAP06340 FAM206BP-201ENST00000510179 541 ntBASIC4.07□□□□□ -1.76
HLA-DOAP06340 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DOAP06340 RN7SKP256-201ENST00000517201 314 ntBASIC4.07□□□□□ -1.76
HLA-DOAP06340 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.07□□□□□ -1.76
HLA-DOAP06340 FAM60DP-201ENST00000524174 632 ntBASIC4.07□□□□□ -1.76
HLA-DOAP06340 AP001804.3-201ENST00000525146 880 ntBASIC4.07□□□□□ -1.76
HLA-DOAP06340 AP003385.6-201ENST00000531603 374 ntBASIC4.07□□□□□ -1.76
HLA-DOAP06340 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.07□□□□□ -1.76
HLA-DOAP06340 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DOAP06340 FRG2DP-202ENST00000566967 323 ntBASIC4.07□□□□□ -1.76
HLA-DOAP06340 MIR4703-201ENST00000577728 79 ntBASIC4.07□□□□□ -1.76
HLA-DOAP06340 MIR4276-201ENST00000584832 70 ntBASIC4.07□□□□□ -1.76
HLA-DOAP06340 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.07□□□□□ -1.76
HLA-DOAP06340 MIR4424-201ENST00000585257 86 ntBASIC4.07□□□□□ -1.76
HLA-DOAP06340 MIR3942-201ENST00000585264 109 ntBASIC4.07□□□□□ -1.76
HLA-DOAP06340 AL355812.1-201ENST00000603215 216 ntBASIC4.07□□□□□ -1.76
HLA-DOAP06340 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DOAP06340 AL031176.1-201ENST00000604554 466 ntBASIC4.07□□□□□ -1.76
HLA-DOAP06340 AL627309.6-201ENST00000606857 840 ntBASIC4.07□□□□□ -1.76
HLA-DOAP06340 AC004908.2-201ENST00000609090 574 ntBASIC4.07□□□□□ -1.76
HLA-DOAP06340 AL359757.2-201ENST00000624309 274 ntBASIC4.07□□□□□ -1.76
HLA-DOAP06340 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DOAP06340 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
HLA-DOAP06340 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.06□□□□□ -1.76
HLA-DOAP06340 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.06□□□□□ -1.76
HLA-DOAP06340 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
HLA-DOAP06340 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DOAP06340 ZNF33CP-201ENST00000432492 2030 ntBASIC4.06□□□□□ -1.76
HLA-DOAP06340 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DOAP06340 Y_RNA.167-201ENST00000363735 109 ntBASIC4.06□□□□□ -1.76
HLA-DOAP06340 Y_RNA.259-201ENST00000364619 101 ntBASIC4.06□□□□□ -1.76
HLA-DOAP06340 Y_RNA.301-201ENST00000364990 103 ntBASIC4.06□□□□□ -1.76
HLA-DOAP06340 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DOAP06340 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DOAP06340 RNU6-474P-201ENST00000384243 107 ntBASIC4.06□□□□□ -1.76
HLA-DOAP06340 LAP3P1-201ENST00000403648 294 ntBASIC4.06□□□□□ -1.76
HLA-DOAP06340 RNA5SP39-201ENST00000411245 120 ntBASIC4.06□□□□□ -1.76
HLA-DOAP06340 RNA5SP107-201ENST00000411358 122 ntBASIC4.06□□□□□ -1.76
HLA-DOAP06340 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DOAP06340 AC017079.2-201ENST00000416102 485 ntBASIC4.06□□□□□ -1.76
HLA-DOAP06340 GPM6BP2-201ENST00000432046 144 ntBASIC4.06□□□□□ -1.76
HLA-DOAP06340 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DOAP06340 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DOAP06340 AF228730.2-201ENST00000438784 848 ntBASIC4.06□□□□□ -1.76
HLA-DOAP06340 BRK1P2-201ENST00000442875 223 ntBASIC4.06□□□□□ -1.76
HLA-DOAP06340 GPM6BP1-201ENST00000446387 144 ntBASIC4.06□□□□□ -1.76
HLA-DOAP06340 snoU109.4-201ENST00000458953 143 ntBASIC4.06□□□□□ -1.76
HLA-DOAP06340 RNU7-182P-201ENST00000459009 62 ntBASIC4.06□□□□□ -1.76
HLA-DOAP06340 RNU7-59P-201ENST00000459101 61 ntBASIC4.06□□□□□ -1.76
HLA-DOAP06340 RNU7-66P-201ENST00000459469 62 ntBASIC4.06□□□□□ -1.76
HLA-DOAP06340 RNU6-327P-201ENST00000516270 127 ntBASIC4.06□□□□□ -1.76
HLA-DOAP06340 RNU7-51P-201ENST00000516560 62 ntBASIC4.06□□□□□ -1.76
HLA-DOAP06340 IGKV2-23-201ENST00000518729 323 ntBASIC4.06□□□□□ -1.76
HLA-DOAP06340 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DOAP06340 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DOAP06340 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DOAP06340 AC011979.2-201ENST00000527568 352 ntBASIC4.06□□□□□ -1.76
HLA-DOAP06340 DEFB108D-201ENST00000527787 222 ntBASIC4.06□□□□□ -1.76
HLA-DOAP06340 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DOAP06340 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DOAP06340 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.06□□□□□ -1.76
HLA-DOAP06340 POLR3GP2-201ENST00000588366 668 ntBASIC4.06□□□□□ -1.76
HLA-DOAP06340 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DOAP06340 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DOAP06340 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DOAP06340 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DOAP06340 AC011155.2-201ENST00000623202 216 ntBASIC4.06□□□□□ -1.76
HLA-DOAP06340 Z83843.1-201ENST00000604070 3685 ntBASIC4.06□□□□□ -1.76
HLA-DOAP06340 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DOAP06340 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DOAP06340 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms