Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC122134.1-202ENST00000569111 1201 ntBASIC1.71□□□□□ -2.14
HLA-DQB2P05538 MIR5571-201ENST00000577998 113 ntBASIC1.71□□□□□ -2.14
HLA-DQB2P05538 AC008749.1-201ENST00000597650 306 ntBASIC1.71□□□□□ -2.14
HLA-DQB2P05538 AC008121.1-201ENST00000603244 268 ntBASIC1.71□□□□□ -2.14
HLA-DQB2P05538 AL158211.4-201ENST00000606988 584 ntBASIC1.71□□□□□ -2.14
HLA-DQB2P05538 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC1.71□□□□□ -2.14
HLA-DQB2P05538 AC010678.1-201ENST00000614118 713 ntBASIC1.71□□□□□ -2.14
HLA-DQB2P05538 AC013476.2-201ENST00000614456 459 ntBASIC1.71□□□□□ -2.14
HLA-DQB2P05538 AL162373.1-201ENST00000620433 407 ntBASIC1.71□□□□□ -2.14
HLA-DQB2P05538 AL157770.1-201ENST00000623049 439 ntBASIC1.71□□□□□ -2.14
HLA-DQB2P05538 AC005858.4-201ENST00000623191 700 ntBASIC1.71□□□□□ -2.14
HLA-DQB2P05538 AC241585.2-209ENST00000638217 143 ntBASIC1.71□□□□□ -2.14
HLA-DQB2P05538 RNU6-216P-201ENST00000363282 104 ntBASIC1.7□□□□□ -2.14
HLA-DQB2P05538 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
HLA-DQB2P05538 Z98749.2-208ENST00000381646 500 ntBASIC1.7□□□□□ -2.14
HLA-DQB2P05538 RNU6-354P-201ENST00000383862 107 ntBASIC1.7□□□□□ -2.14
HLA-DQB2P05538 RNU6-610P-201ENST00000384264 107 ntBASIC1.7□□□□□ -2.14
HLA-DQB2P05538 SNORA26.9-201ENST00000391322 122 ntBASIC1.7□□□□□ -2.14
HLA-DQB2P05538 CIR1P3-201ENST00000405137 479 ntBASIC1.7□□□□□ -2.14
HLA-DQB2P05538 MTND3P20-201ENST00000407663 186 ntBASIC1.7□□□□□ -2.14
HLA-DQB2P05538 AL030996.1-201ENST00000411430 235 ntBASIC1.7□□□□□ -2.14
HLA-DQB2P05538 SDCBPP1-201ENST00000440192 890 ntBASIC1.7□□□□□ -2.14
HLA-DQB2P05538 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.7□□□□□ -2.14
HLA-DQB2P05538 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.7□□□□□ -2.14
HLA-DQB2P05538 RPL26P9-201ENST00000457466 433 ntBASIC1.7□□□□□ -2.14
HLA-DQB2P05538 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC1.7□□□□□ -2.14
HLA-DQB2P05538 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.7□□□□□ -2.14
HLA-DQB2P05538 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
HLA-DQB2P05538 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.7□□□□□ -2.14
HLA-DQB2P05538 SNORA31.6-201ENST00000516241 130 ntBASIC1.7□□□□□ -2.14
HLA-DQB2P05538 NRON-201ENST00000517270 370 ntBASIC1.7□□□□□ -2.14
HLA-DQB2P05538 AC022861.1-201ENST00000522981 663 ntBASIC1.7□□□□□ -2.14
HLA-DQB2P05538 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.7□□□□□ -2.14
HLA-DQB2P05538 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.7□□□□□ -2.14
HLA-DQB2P05538 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.7□□□□□ -2.14
HLA-DQB2P05538 AC010186.2-204ENST00000537668 439 ntBASIC1.7□□□□□ -2.14
HLA-DQB2P05538 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.7□□□□□ -2.14
HLA-DQB2P05538 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.7□□□□□ -2.14
HLA-DQB2P05538 AC098826.3-201ENST00000603823 466 ntBASIC1.7□□□□□ -2.14
HLA-DQB2P05538 AC012493.3-201ENST00000604494 112 ntBASIC1.7□□□□□ -2.14
HLA-DQB2P05538 AC025588.2-201ENST00000604851 466 ntBASIC1.7□□□□□ -2.14
HLA-DQB2P05538 AL390208.1-201ENST00000605885 644 ntBASIC1.7□□□□□ -2.14
HLA-DQB2P05538 AC107214.2-201ENST00000608204 634 ntBASIC1.7□□□□□ -2.14
HLA-DQB2P05538 AC091834.1-201ENST00000614543 472 ntBASIC1.7□□□□□ -2.14
HLA-DQB2P05538 AL118508.4-201ENST00000624142 1176 ntBASIC1.7□□□□□ -2.14
HLA-DQB2P05538 AL159972.1-201ENST00000625150 448 ntBASIC1.7□□□□□ -2.14
HLA-DQB2P05538 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.7□□□□□ -2.14
HLA-DQB2P05538 MIR4275-201ENST00000636486 87 ntBASIC1.7□□□□□ -2.14
HLA-DQB2P05538 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
HLA-DQB2P05538 AC004520.1-201ENST00000608362 1413 ntBASIC1.69□□□□□ -2.14
HLA-DQB2P05538 RNU6-884P-201ENST00000363889 107 ntBASIC1.69□□□□□ -2.14
HLA-DQB2P05538 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
HLA-DQB2P05538 RNU6-1083P-201ENST00000384022 107 ntBASIC1.69□□□□□ -2.14
HLA-DQB2P05538 MIR504-201ENST00000385065 83 ntBASIC1.69□□□□□ -2.14
HLA-DQB2P05538 RPL23AP29-201ENST00000397284 453 ntBASIC1.69□□□□□ -2.14
HLA-DQB2P05538 AC096649.2-201ENST00000416186 393 ntBASIC1.69□□□□□ -2.14
HLA-DQB2P05538 FO393414.1-201ENST00000428697 1184 ntBASIC1.69□□□□□ -2.14
HLA-DQB2P05538 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.69□□□□□ -2.14
HLA-DQB2P05538 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.69□□□□□ -2.14
HLA-DQB2P05538 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC1.69□□□□□ -2.14
HLA-DQB2P05538 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.69□□□□□ -2.14
HLA-DQB2P05538 AC093155.1-201ENST00000440164 826 ntBASIC1.69□□□□□ -2.14
HLA-DQB2P05538 RPL12P25-201ENST00000455592 494 ntBASIC1.69□□□□□ -2.14
HLA-DQB2P05538 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC1.69□□□□□ -2.14
HLA-DQB2P05538 RPS20P20-201ENST00000460498 340 ntBASIC1.69□□□□□ -2.14
HLA-DQB2P05538 AL121769.1-201ENST00000469473 401 ntBASIC1.69□□□□□ -2.14
HLA-DQB2P05538 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.69□□□□□ -2.14
HLA-DQB2P05538 RNU7-193P-201ENST00000516723 65 ntBASIC1.69□□□□□ -2.14
HLA-DQB2P05538 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.69□□□□□ -2.14
HLA-DQB2P05538 OR5AQ1P-201ENST00000527596 927 ntBASIC1.69□□□□□ -2.14
HLA-DQB2P05538 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.69□□□□□ -2.14
HLA-DQB2P05538 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.69□□□□□ -2.14
HLA-DQB2P05538 AC090615.1-201ENST00000577519 154 ntBASIC1.69□□□□□ -2.14
HLA-DQB2P05538 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.69□□□□□ -2.14
HLA-DQB2P05538 AP000403.1-201ENST00000603349 851 ntBASIC1.69□□□□□ -2.14
HLA-DQB2P05538 AC011451.2-201ENST00000604303 598 ntBASIC1.69□□□□□ -2.14
HLA-DQB2P05538 AL450336.1-201ENST00000605180 586 ntBASIC1.69□□□□□ -2.14
HLA-DQB2P05538 AC116312.1-201ENST00000606841 314 ntBASIC1.69□□□□□ -2.14
HLA-DQB2P05538 AC007349.4-201ENST00000608114 532 ntBASIC1.69□□□□□ -2.14
HLA-DQB2P05538 AC120349.2-201ENST00000625002 298 ntBASIC1.69□□□□□ -2.14
HLA-DQB2P05538 MTCO1P9-201ENST00000505577 1534 ntBASIC1.69□□□□□ -2.14
HLA-DQB2P05538 RNU6-707P-201ENST00000364647 95 ntBASIC1.68□□□□□ -2.14
HLA-DQB2P05538 RNU6-609P-201ENST00000365459 107 ntBASIC1.68□□□□□ -2.14
HLA-DQB2P05538 RNU6-207P-201ENST00000384137 107 ntBASIC1.68□□□□□ -2.14
HLA-DQB2P05538 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
HLA-DQB2P05538 SNORD65.1-201ENST00000390889 71 ntBASIC1.68□□□□□ -2.14
HLA-DQB2P05538 MCTS2P-201ENST00000394552 546 ntBASIC1.68□□□□□ -2.14
HLA-DQB2P05538 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
HLA-DQB2P05538 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC1.68□□□□□ -2.14
HLA-DQB2P05538 CYCSP48-201ENST00000417124 323 ntBASIC1.68□□□□□ -2.14
HLA-DQB2P05538 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.68□□□□□ -2.14
HLA-DQB2P05538 BPY2DP-201ENST00000422208 265 ntBASIC1.68□□□□□ -2.14
HLA-DQB2P05538 AL139421.1-201ENST00000423010 169 ntBASIC1.68□□□□□ -2.14
HLA-DQB2P05538 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.68□□□□□ -2.14
HLA-DQB2P05538 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC1.68□□□□□ -2.14
HLA-DQB2P05538 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC1.68□□□□□ -2.14
HLA-DQB2P05538 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.68□□□□□ -2.14
HLA-DQB2P05538 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.68□□□□□ -2.14
HLA-DQB2P05538 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.68□□□□□ -2.14
HLA-DQB2P05538 ATG12P2-201ENST00000456830 416 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms