Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 OR6C73P-201ENST00000546432 358 ntBASIC0.45□□□□□ -2.34
APOBP04114 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.45□□□□□ -2.34
APOBP04114 LINC00933-203ENST00000559812 219 ntBASIC0.45□□□□□ -2.34
APOBP04114 AL096840.1-201ENST00000603287 93 ntBASIC0.45□□□□□ -2.34
APOBP04114 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.45□□□□□ -2.34
APOBP04114 MIR17-201ENST00000385012 84 ntBASIC0.45□□□□□ -2.34
APOBP04114 PTGES3P2-201ENST00000407942 482 ntBASIC0.45□□□□□ -2.34
APOBP04114 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC0.45□□□□□ -2.34
APOBP04114 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC0.45□□□□□ -2.34
APOBP04114 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.45□□□□□ -2.34
APOBP04114 AC245884.12-201ENST00000615364 59 ntBASIC0.45□□□□□ -2.34
APOBP04114 MIR924-201ENST00000638017 53 ntBASIC0.45□□□□□ -2.34
APOBP04114 AC091812.1-201ENST00000432235 1948 ntBASIC0.45□□□□□ -2.34
APOBP04114 Y_RNA.412-201ENST00000384001 104 ntBASIC0.45□□□□□ -2.34
APOBP04114 UBE2V1P9-201ENST00000414760 368 ntBASIC0.45□□□□□ -2.34
APOBP04114 AC004854.1-201ENST00000440356 349 ntBASIC0.45□□□□□ -2.34
APOBP04114 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.45□□□□□ -2.34
APOBP04114 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC0.45□□□□□ -2.34
APOBP04114 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
APOBP04114 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
APOBP04114 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
APOBP04114 AL035666.1-201ENST00000446195 348 ntBASIC0.44□□□□□ -2.34
APOBP04114 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC0.44□□□□□ -2.34
APOBP04114 AC243829.6-201ENST00000612652 106 ntBASIC0.44□□□□□ -2.34
APOBP04114 AC022079.2-201ENST00000619739 566 ntBASIC0.44□□□□□ -2.34
APOBP04114 AC007792.1-201ENST00000623023 402 ntBASIC0.44□□□□□ -2.34
APOBP04114 RNA5SP347-201ENST00000362445 119 ntBASIC0.44□□□□□ -2.34
APOBP04114 HMGN2P21-201ENST00000447764 270 ntBASIC0.44□□□□□ -2.34
APOBP04114 RNU1-98P-201ENST00000458992 160 ntBASIC0.44□□□□□ -2.34
APOBP04114 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC0.44□□□□□ -2.34
APOBP04114 AC009901.1-201ENST00000506703 541 ntBASIC0.44□□□□□ -2.34
APOBP04114 AC008749.1-201ENST00000597650 306 ntBASIC0.44□□□□□ -2.34
APOBP04114 CCT4P2-201ENST00000233836 1548 ntBASIC0.44□□□□□ -2.34
APOBP04114 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.44□□□□□ -2.34
APOBP04114 Y_RNA.518-201ENST00000384552 113 ntBASIC0.44□□□□□ -2.34
APOBP04114 RPL31P52-201ENST00000407532 367 ntBASIC0.44□□□□□ -2.34
APOBP04114 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC0.44□□□□□ -2.34
APOBP04114 AC117503.1-201ENST00000472241 394 ntBASIC0.44□□□□□ -2.34
APOBP04114 RNA5SP468-201ENST00000516782 93 ntBASIC0.44□□□□□ -2.34
APOBP04114 SNORA44.1-201ENST00000517031 108 ntBASIC0.44□□□□□ -2.34
APOBP04114 AL132857.1-201ENST00000555180 708 ntBASIC0.44□□□□□ -2.34
APOBP04114 CENPUP2-201ENST00000555897 1186 ntBASIC0.44□□□□□ -2.34
APOBP04114 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC0.44□□□□□ -2.34
APOBP04114 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC0.44□□□□□ -2.34
APOBP04114 AL589743.1-201ENST00000551932 2712 ntBASIC0.44□□□□□ -2.34
APOBP04114 MTND5P11-201ENST00000511037 1812 ntBASIC0.44□□□□□ -2.34
APOBP04114 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
APOBP04114 AC073544.1-201ENST00000600110 1595 ntBASIC0.44□□□□□ -2.34
APOBP04114 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.43□□□□□ -2.34
APOBP04114 FAM206BP-201ENST00000510179 541 ntBASIC0.43□□□□□ -2.34
APOBP04114 SNORA31.18-201ENST00000517043 134 ntBASIC0.43□□□□□ -2.34
APOBP04114 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC0.43□□□□□ -2.34
APOBP04114 AC106791.2-201ENST00000604680 391 ntBASIC0.43□□□□□ -2.34
APOBP04114 AC006065.5-201ENST00000623427 349 ntBASIC0.43□□□□□ -2.34
APOBP04114 Y_RNA.549-201ENST00000384657 102 ntBASIC0.43□□□□□ -2.34
APOBP04114 RNU6-1077P-201ENST00000410506 102 ntBASIC0.43□□□□□ -2.34
APOBP04114 AL356379.1-201ENST00000414105 126 ntBASIC0.43□□□□□ -2.34
APOBP04114 HMGN2P16-201ENST00000456802 261 ntBASIC0.43□□□□□ -2.34
APOBP04114 AC097493.1-201ENST00000463958 372 ntBASIC0.43□□□□□ -2.34
APOBP04114 AC104692.1-201ENST00000472406 90 ntBASIC0.43□□□□□ -2.34
APOBP04114 AC096745.1-201ENST00000509945 370 ntBASIC0.43□□□□□ -2.34
APOBP04114 ERHP1-201ENST00000523006 310 ntBASIC0.43□□□□□ -2.34
APOBP04114 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.43□□□□□ -2.34
APOBP04114 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.43□□□□□ -2.34
APOBP04114 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC0.43□□□□□ -2.34
APOBP04114 MTCO3P46-201ENST00000425787 232 ntBASIC0.43□□□□□ -2.34
APOBP04114 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.43□□□□□ -2.34
APOBP04114 RPL23AP6-201ENST00000446637 472 ntBASIC0.43□□□□□ -2.34
APOBP04114 RPL23AP35-201ENST00000451906 501 ntBASIC0.43□□□□□ -2.34
APOBP04114 AC018437.1-201ENST00000492214 406 ntBASIC0.43□□□□□ -2.34
APOBP04114 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC0.43□□□□□ -2.34
APOBP04114 AP003497.1-201ENST00000528472 562 ntBASIC0.43□□□□□ -2.34
APOBP04114 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.43□□□□□ -2.34
APOBP04114 AC084033.1-201ENST00000550830 633 ntBASIC0.43□□□□□ -2.34
APOBP04114 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC0.43□□□□□ -2.34
APOBP04114 AL355812.1-201ENST00000603215 216 ntBASIC0.43□□□□□ -2.34
APOBP04114 AC012443.1-201ENST00000605605 231 ntBASIC0.43□□□□□ -2.34
APOBP04114 AP001486.3-201ENST00000615334 372 ntBASIC0.43□□□□□ -2.34
APOBP04114 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
APOBP04114 AL356057.2-201ENST00000403318 432 ntBASIC0.43□□□□□ -2.34
APOBP04114 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC0.43□□□□□ -2.34
APOBP04114 RPS27P26-201ENST00000494583 239 ntBASIC0.43□□□□□ -2.34
APOBP04114 RPL30P5-201ENST00000494923 336 ntBASIC0.43□□□□□ -2.34
APOBP04114 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.43□□□□□ -2.34
APOBP04114 AC004812.1-201ENST00000540773 146 ntBASIC0.43□□□□□ -2.34
APOBP04114 MTCYBP23-201ENST00000558717 1102 ntBASIC0.43□□□□□ -2.34
APOBP04114 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC0.43□□□□□ -2.34
APOBP04114 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC0.43□□□□□ -2.34
APOBP04114 HAUS6P2-201ENST00000433254 2404 ntBASIC0.42□□□□□ -2.34
APOBP04114 RNU6-1164P-201ENST00000364428 107 ntBASIC0.42□□□□□ -2.34
APOBP04114 MIR627-201ENST00000384979 97 ntBASIC0.42□□□□□ -2.34
APOBP04114 AC092648.1-201ENST00000425870 423 ntBASIC0.42□□□□□ -2.34
APOBP04114 RNA5SP285-201ENST00000516619 119 ntBASIC0.42□□□□□ -2.34
APOBP04114 SNORA48.11-201ENST00000517015 89 ntBASIC0.42□□□□□ -2.34
APOBP04114 IL33-203ENST00000456383 2501 ntTSL 5 BASIC0.42□□□□□ -2.34
APOBP04114 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.42□□□□□ -2.34
APOBP04114 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC0.42□□□□□ -2.34
APOBP04114 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC0.42□□□□□ -2.34
APOBP04114 AC016691.1-201ENST00000441321 413 ntBASIC0.42□□□□□ -2.34
APOBP04114 SNORD39.2-201ENST00000579995 76 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms