Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 RNU6-840P-201ENST00000517275 65 ntBASIC3.01□□□□□ -1.93
VTNP04004 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.01□□□□□ -1.93
VTNP04004 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.01□□□□□ -1.93
VTNP04004 AL133153.1-201ENST00000557756 303 ntBASIC3.01□□□□□ -1.93
VTNP04004 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.01□□□□□ -1.93
VTNP04004 MIR4298-201ENST00000584380 73 ntBASIC3.01□□□□□ -1.93
VTNP04004 AF038458.1-201ENST00000588406 262 ntBASIC3.01□□□□□ -1.93
VTNP04004 AP002826.1-201ENST00000608835 315 ntBASIC3.01□□□□□ -1.93
VTNP04004 AC090115.4-201ENST00000609970 188 ntBASIC3.01□□□□□ -1.93
VTNP04004 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.01□□□□□ -1.93
VTNP04004 AC068831.7-201ENST00000616954 363 ntBASIC3.01□□□□□ -1.93
VTNP04004 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.01□□□□□ -1.93
VTNP04004 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
VTNP04004 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.01□□□□□ -1.93
VTNP04004 AL138713.1-201ENST00000624026 2130 ntBASIC3.01□□□□□ -1.93
VTNP04004 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3□□□□□ -1.93
VTNP04004 AC092326.2-201ENST00000624772 1561 ntBASIC3□□□□□ -1.93
VTNP04004 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3□□□□□ -1.93
VTNP04004 FAM35BP-202ENST00000497389 3337 ntBASIC3□□□□□ -1.93
VTNP04004 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3□□□□□ -1.93
VTNP04004 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3□□□□□ -1.93
VTNP04004 Y_RNA.517-201ENST00000384551 106 ntBASIC3□□□□□ -1.93
VTNP04004 SNORD116-4-201ENST00000384733 96 ntBASIC3□□□□□ -1.93
VTNP04004 RNU6-754P-201ENST00000391166 107 ntBASIC3□□□□□ -1.93
VTNP04004 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3□□□□□ -1.93
VTNP04004 RNU6-248P-201ENST00000410720 107 ntBASIC3□□□□□ -1.93
VTNP04004 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3□□□□□ -1.93
VTNP04004 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3□□□□□ -1.93
VTNP04004 AC012498.1-201ENST00000424037 437 ntBASIC3□□□□□ -1.93
VTNP04004 RPL27AP8-201ENST00000424277 446 ntBASIC3□□□□□ -1.93
VTNP04004 AC007283.2-201ENST00000424739 197 ntBASIC3□□□□□ -1.93
VTNP04004 NEK4P1-201ENST00000433383 879 ntBASIC3□□□□□ -1.93
VTNP04004 SNRPEP4-201ENST00000435815 279 ntBASIC3□□□□□ -1.93
VTNP04004 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3□□□□□ -1.93
VTNP04004 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3□□□□□ -1.93
VTNP04004 AP004217.1-201ENST00000480579 346 ntBASIC3□□□□□ -1.93
VTNP04004 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3□□□□□ -1.93
VTNP04004 ERHP1-201ENST00000523006 310 ntBASIC3□□□□□ -1.93
VTNP04004 AC022690.1-201ENST00000526681 550 ntBASIC3□□□□□ -1.93
VTNP04004 DEFB108A-201ENST00000530110 222 ntBASIC3□□□□□ -1.93
VTNP04004 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3□□□□□ -1.93
VTNP04004 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3□□□□□ -1.93
VTNP04004 DUXAP4-201ENST00000603046 613 ntBASIC3□□□□□ -1.93
VTNP04004 AC091805.2-201ENST00000603848 235 ntBASIC3□□□□□ -1.93
VTNP04004 AC008277.2-201ENST00000605196 797 ntBASIC3□□□□□ -1.93
VTNP04004 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3□□□□□ -1.93
VTNP04004 AC103710.1-201ENST00000610003 901 ntBASIC3□□□□□ -1.93
VTNP04004 Z99129.1-201ENST00000612510 255 ntBASIC3□□□□□ -1.93
VTNP04004 AL589743.7-201ENST00000612637 233 ntBASIC3□□□□□ -1.93
VTNP04004 AC093838.1-201ENST00000613014 469 ntBASIC3□□□□□ -1.93
VTNP04004 MIR6130-201ENST00000619419 109 ntBASIC3□□□□□ -1.93
VTNP04004 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3□□□□□ -1.93
VTNP04004 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
VTNP04004 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
VTNP04004 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
VTNP04004 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.99□□□□□ -1.93
VTNP04004 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
VTNP04004 RPL9P7-201ENST00000330965 580 ntBASIC2.99□□□□□ -1.93
VTNP04004 SNORA23-201ENST00000365128 182 ntBASIC2.99□□□□□ -1.93
VTNP04004 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
VTNP04004 MIR493-201ENST00000385254 89 ntBASIC2.99□□□□□ -1.93
VTNP04004 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
VTNP04004 RNU2-8P-201ENST00000410727 190 ntBASIC2.99□□□□□ -1.93
VTNP04004 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.99□□□□□ -1.93
VTNP04004 MRPL50P2-201ENST00000416821 482 ntBASIC2.99□□□□□ -1.93
VTNP04004 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.99□□□□□ -1.93
VTNP04004 AC112220.1-201ENST00000434628 355 ntBASIC2.99□□□□□ -1.93
VTNP04004 AC104850.1-201ENST00000435940 476 ntBASIC2.99□□□□□ -1.93
VTNP04004 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.99□□□□□ -1.93
VTNP04004 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.99□□□□□ -1.93
VTNP04004 AC090525.1-201ENST00000479116 478 ntBASIC2.99□□□□□ -1.93
VTNP04004 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
VTNP04004 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.99□□□□□ -1.93
VTNP04004 RNU4-29P-201ENST00000515943 174 ntBASIC2.99□□□□□ -1.93
VTNP04004 SNORA31.22-201ENST00000517204 135 ntBASIC2.99□□□□□ -1.93
VTNP04004 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
VTNP04004 AC123904.3-201ENST00000547218 814 ntBASIC2.99□□□□□ -1.93
VTNP04004 TRAV37-201ENST00000553906 342 ntBASIC2.99□□□□□ -1.93
VTNP04004 AL163153.1-201ENST00000554223 283 ntBASIC2.99□□□□□ -1.93
VTNP04004 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.99□□□□□ -1.93
VTNP04004 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.99□□□□□ -1.93
VTNP04004 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.99□□□□□ -1.93
VTNP04004 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.99□□□□□ -1.93
VTNP04004 AC073648.5-201ENST00000603502 305 ntBASIC2.99□□□□□ -1.93
VTNP04004 AP000860.1-201ENST00000605250 559 ntBASIC2.99□□□□□ -1.93
VTNP04004 AC091304.9-201ENST00000612091 226 ntBASIC2.99□□□□□ -1.93
VTNP04004 TUG1_2.1-201ENST00000614234 87 ntBASIC2.99□□□□□ -1.93
VTNP04004 AL603758.1-201ENST00000618654 241 ntBASIC2.99□□□□□ -1.93
VTNP04004 AC010338.1-201ENST00000621823 717 ntBASIC2.99□□□□□ -1.93
VTNP04004 PISRT1-201ENST00000626175 531 ntBASIC2.99□□□□□ -1.93
VTNP04004 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.99□□□□□ -1.93
VTNP04004 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
VTNP04004 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
VTNP04004 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
VTNP04004 FARSBP1-201ENST00000435808 1778 ntBASIC2.98□□□□□ -1.93
VTNP04004 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.98□□□□□ -1.93
VTNP04004 DEFB108F-201ENST00000344638 222 ntBASIC2.98□□□□□ -1.93
VTNP04004 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
VTNP04004 RNU5E-1-201ENST00000362477 120 ntBASIC2.98□□□□□ -1.93
VTNP04004 RNU5A-1-201ENST00000362698 116 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms