Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.54□□□□□ -2.16
COL4A1P02462 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.54□□□□□ -2.16
COL4A1P02462 MTND4LP10-201ENST00000435146 291 ntBASIC1.54□□□□□ -2.16
COL4A1P02462 RPL35AP22-201ENST00000436855 335 ntBASIC1.54□□□□□ -2.16
COL4A1P02462 MTND2P29-201ENST00000438595 412 ntBASIC1.54□□□□□ -2.16
COL4A1P02462 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.54□□□□□ -2.16
COL4A1P02462 VPS26AP1-201ENST00000483197 979 ntBASIC1.54□□□□□ -2.16
COL4A1P02462 HMGB1P38-201ENST00000490557 577 ntBASIC1.54□□□□□ -2.16
COL4A1P02462 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.54□□□□□ -2.16
COL4A1P02462 RNU6-27P-201ENST00000516146 107 ntBASIC1.54□□□□□ -2.16
COL4A1P02462 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.54□□□□□ -2.16
COL4A1P02462 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.54□□□□□ -2.16
COL4A1P02462 AC104417.1-201ENST00000523974 751 ntBASIC1.54□□□□□ -2.16
COL4A1P02462 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.54□□□□□ -2.16
COL4A1P02462 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.54□□□□□ -2.16
COL4A1P02462 AC122134.1-202ENST00000569111 1201 ntBASIC1.54□□□□□ -2.16
COL4A1P02462 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.54□□□□□ -2.16
COL4A1P02462 MIR5194-201ENST00000582634 120 ntBASIC1.54□□□□□ -2.16
COL4A1P02462 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.54□□□□□ -2.16
COL4A1P02462 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.54□□□□□ -2.16
COL4A1P02462 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.54□□□□□ -2.16
COL4A1P02462 DPRXP5-201ENST00000604662 539 ntBASIC1.54□□□□□ -2.16
COL4A1P02462 AC008962.1-201ENST00000605729 304 ntBASIC1.54□□□□□ -2.16
COL4A1P02462 AP002802.2-201ENST00000605877 235 ntBASIC1.54□□□□□ -2.16
COL4A1P02462 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.54□□□□□ -2.16
COL4A1P02462 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.54□□□□□ -2.16
COL4A1P02462 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.54□□□□□ -2.16
COL4A1P02462 AC090116.1-201ENST00000615679 446 ntBASIC1.54□□□□□ -2.16
COL4A1P02462 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC1.54□□□□□ -2.16
COL4A1P02462 MIR3199-2-201ENST00000636243 86 ntBASIC1.54□□□□□ -2.16
COL4A1P02462 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.54□□□□□ -2.16
COL4A1P02462 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
COL4A1P02462 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.53□□□□□ -2.16
COL4A1P02462 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
COL4A1P02462 RNU6-115P-201ENST00000364310 107 ntBASIC1.53□□□□□ -2.16
COL4A1P02462 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1.53□□□□□ -2.16
COL4A1P02462 RNU6-444P-201ENST00000383988 108 ntBASIC1.53□□□□□ -2.16
COL4A1P02462 RNU6-1181P-201ENST00000384191 106 ntBASIC1.53□□□□□ -2.16
COL4A1P02462 MIR217-201ENST00000384817 110 ntBASIC1.53□□□□□ -2.16
COL4A1P02462 RPL7P30-201ENST00000420888 709 ntBASIC1.53□□□□□ -2.16
COL4A1P02462 AC012497.1-201ENST00000429392 575 ntBASIC1.53□□□□□ -2.16
COL4A1P02462 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.53□□□□□ -2.16
COL4A1P02462 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.53□□□□□ -2.16
COL4A1P02462 AC093155.1-201ENST00000440164 826 ntBASIC1.53□□□□□ -2.16
COL4A1P02462 RABEPKP1-201ENST00000440529 1026 ntBASIC1.53□□□□□ -2.16
COL4A1P02462 AL034418.1-201ENST00000448675 860 ntBASIC1.53□□□□□ -2.16
COL4A1P02462 NDUFA5P7-201ENST00000452914 242 ntBASIC1.53□□□□□ -2.16
COL4A1P02462 AL049829.1-201ENST00000465411 156 ntBASIC1.53□□□□□ -2.16
COL4A1P02462 AC092902.1-201ENST00000486999 259 ntBASIC1.53□□□□□ -2.16
COL4A1P02462 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.53□□□□□ -2.16
COL4A1P02462 AC093767.1-201ENST00000504523 156 ntBASIC1.53□□□□□ -2.16
COL4A1P02462 BOLA3P3-201ENST00000505182 232 ntBASIC1.53□□□□□ -2.16
COL4A1P02462 SUMO2P5-201ENST00000506790 245 ntBASIC1.53□□□□□ -2.16
COL4A1P02462 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.53□□□□□ -2.16
COL4A1P02462 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.53□□□□□ -2.16
COL4A1P02462 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC1.53□□□□□ -2.16
COL4A1P02462 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.53□□□□□ -2.16
COL4A1P02462 AC022634.1-201ENST00000520765 532 ntBASIC1.53□□□□□ -2.16
COL4A1P02462 AC093519.1-201ENST00000566109 298 ntBASIC1.53□□□□□ -2.16
COL4A1P02462 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC1.53□□□□□ -2.16
COL4A1P02462 GLUD1P4-201ENST00000590914 418 ntBASIC1.53□□□□□ -2.16
COL4A1P02462 AC005332.6-201ENST00000613178 446 ntBASIC1.53□□□□□ -2.16
COL4A1P02462 AC126544.2-201ENST00000625174 749 ntBASIC1.53□□□□□ -2.16
COL4A1P02462 AC025048.6-202ENST00000627667 438 ntBASIC1.53□□□□□ -2.16
COL4A1P02462 AC111188.2-201ENST00000529697 1387 ntBASIC1.52□□□□□ -2.17
COL4A1P02462 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.52□□□□□ -2.17
COL4A1P02462 Y_RNA.36-201ENST00000362602 112 ntBASIC1.52□□□□□ -2.17
COL4A1P02462 RNU6-203P-201ENST00000384038 104 ntBASIC1.52□□□□□ -2.17
COL4A1P02462 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
COL4A1P02462 RNA5SP56-201ENST00000410277 118 ntBASIC1.52□□□□□ -2.17
COL4A1P02462 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.52□□□□□ -2.17
COL4A1P02462 AL035410.1-201ENST00000427409 427 ntBASIC1.52□□□□□ -2.17
COL4A1P02462 MTCYBP32-201ENST00000427945 1084 ntBASIC1.52□□□□□ -2.17
COL4A1P02462 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
COL4A1P02462 RPS24P6-201ENST00000452670 400 ntBASIC1.52□□□□□ -2.17
COL4A1P02462 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.52□□□□□ -2.17
COL4A1P02462 PABPC1P3-201ENST00000469174 459 ntBASIC1.52□□□□□ -2.17
COL4A1P02462 AC015908.1-201ENST00000478739 476 ntBASIC1.52□□□□□ -2.17
COL4A1P02462 AC090096.1-201ENST00000489168 390 ntBASIC1.52□□□□□ -2.17
COL4A1P02462 AC104629.1-201ENST00000494226 508 ntBASIC1.52□□□□□ -2.17
COL4A1P02462 AC093801.2-201ENST00000503966 1050 ntBASIC1.52□□□□□ -2.17
COL4A1P02462 AC091860.1-201ENST00000505723 432 ntBASIC1.52□□□□□ -2.17
COL4A1P02462 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC1.52□□□□□ -2.17
COL4A1P02462 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
COL4A1P02462 AC010376.1-201ENST00000522101 334 ntBASIC1.52□□□□□ -2.17
COL4A1P02462 MTND1P36-201ENST00000522384 936 ntBASIC1.52□□□□□ -2.17
COL4A1P02462 SUB1P1-201ENST00000524415 382 ntBASIC1.52□□□□□ -2.17
COL4A1P02462 AC016957.1-201ENST00000534895 309 ntBASIC1.52□□□□□ -2.17
COL4A1P02462 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.52□□□□□ -2.17
COL4A1P02462 LSM6P2-201ENST00000552208 177 ntBASIC1.52□□□□□ -2.17
COL4A1P02462 AC090666.1-201ENST00000578241 445 ntBASIC1.52□□□□□ -2.17
COL4A1P02462 MIR4666A-201ENST00000580160 79 ntBASIC1.52□□□□□ -2.17
COL4A1P02462 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC1.52□□□□□ -2.17
COL4A1P02462 AP000238.1-201ENST00000608759 426 ntBASIC1.52□□□□□ -2.17
COL4A1P02462 AP005137.2-201ENST00000609238 400 ntBASIC1.52□□□□□ -2.17
COL4A1P02462 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
COL4A1P02462 AL138880.2-201ENST00000616214 239 ntBASIC1.52□□□□□ -2.17
COL4A1P02462 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.52□□□□□ -2.17
COL4A1P02462 AC018755.4-201ENST00000619715 454 ntBASIC1.52□□□□□ -2.17
COL4A1P02462 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms