Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 MIR888-201ENST00000401186 77 ntBASIC1.92□□□□□ -2.1
HLA-DQA1P01909 ERMN-204ENST00000409925 556 ntTSL 4 BASIC1.92□□□□□ -2.1
HLA-DQA1P01909 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.92□□□□□ -2.1
HLA-DQA1P01909 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DQA1P01909 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HLA-DQA1P01909 AC010099.3-201ENST00000423896 409 ntBASIC1.92□□□□□ -2.1
HLA-DQA1P01909 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DQA1P01909 SKA2P1-201ENST00000425592 390 ntBASIC1.92□□□□□ -2.1
HLA-DQA1P01909 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC1.92□□□□□ -2.1
HLA-DQA1P01909 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DQA1P01909 RPL37P21-201ENST00000435890 276 ntBASIC1.92□□□□□ -2.1
HLA-DQA1P01909 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DQA1P01909 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DQA1P01909 AL513328.1-201ENST00000446460 224 ntBASIC1.92□□□□□ -2.1
HLA-DQA1P01909 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DQA1P01909 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DQA1P01909 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.92□□□□□ -2.1
HLA-DQA1P01909 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DQA1P01909 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.92□□□□□ -2.1
HLA-DQA1P01909 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.92□□□□□ -2.1
HLA-DQA1P01909 RPL23AP70-201ENST00000483361 460 ntBASIC1.92□□□□□ -2.1
HLA-DQA1P01909 AC008716.1-201ENST00000511084 513 ntBASIC1.92□□□□□ -2.1
HLA-DQA1P01909 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.92□□□□□ -2.1
HLA-DQA1P01909 AC112673.1-201ENST00000513168 575 ntBASIC1.92□□□□□ -2.1
HLA-DQA1P01909 RNU6-1003P-201ENST00000517099 105 ntBASIC1.92□□□□□ -2.1
HLA-DQA1P01909 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DQA1P01909 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DQA1P01909 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC1.92□□□□□ -2.1
HLA-DQA1P01909 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DQA1P01909 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC1.92□□□□□ -2.1
HLA-DQA1P01909 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.92□□□□□ -2.1
HLA-DQA1P01909 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.92□□□□□ -2.1
HLA-DQA1P01909 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DQA1P01909 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.92□□□□□ -2.1
HLA-DQA1P01909 AC011471.1-201ENST00000585766 187 ntBASIC1.92□□□□□ -2.1
HLA-DQA1P01909 AL355877.2-201ENST00000603670 358 ntBASIC1.92□□□□□ -2.1
HLA-DQA1P01909 AC098826.3-201ENST00000603823 466 ntBASIC1.92□□□□□ -2.1
HLA-DQA1P01909 AC112187.2-201ENST00000604345 283 ntBASIC1.92□□□□□ -2.1
HLA-DQA1P01909 AL161798.1-201ENST00000604630 131 ntBASIC1.92□□□□□ -2.1
HLA-DQA1P01909 AL137843.1-201ENST00000605078 385 ntBASIC1.92□□□□□ -2.1
HLA-DQA1P01909 YPEL5P2-201ENST00000605553 359 ntBASIC1.92□□□□□ -2.1
HLA-DQA1P01909 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.92□□□□□ -2.1
HLA-DQA1P01909 AC103710.1-201ENST00000610003 901 ntBASIC1.92□□□□□ -2.1
HLA-DQA1P01909 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HLA-DQA1P01909 AC008498.1-201ENST00000613012 531 ntBASIC1.92□□□□□ -2.1
HLA-DQA1P01909 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DQA1P01909 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC1.92□□□□□ -2.1
HLA-DQA1P01909 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
HLA-DQA1P01909 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.92□□□□□ -2.1
HLA-DQA1P01909 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
HLA-DQA1P01909 AC104454.1-201ENST00000421341 1401 ntBASIC1.91□□□□□ -2.1
HLA-DQA1P01909 AC093536.2-201ENST00000565257 1406 ntBASIC1.91□□□□□ -2.1
HLA-DQA1P01909 UBE2L2-201ENST00000254302 429 ntBASIC1.91□□□□□ -2.1
HLA-DQA1P01909 RNU6-701P-201ENST00000384059 107 ntBASIC1.91□□□□□ -2.1
HLA-DQA1P01909 SNORA9-201ENST00000384215 133 ntBASIC1.91□□□□□ -2.1
HLA-DQA1P01909 RNU6-809P-201ENST00000384461 107 ntBASIC1.91□□□□□ -2.1
HLA-DQA1P01909 RNU6-14P-201ENST00000384630 106 ntBASIC1.91□□□□□ -2.1
HLA-DQA1P01909 MIR128-1-201ENST00000384921 82 ntBASIC1.91□□□□□ -2.1
HLA-DQA1P01909 MIR627-201ENST00000384979 97 ntBASIC1.91□□□□□ -2.1
HLA-DQA1P01909 AL122016.1-201ENST00000403365 367 ntBASIC1.91□□□□□ -2.1
HLA-DQA1P01909 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.91□□□□□ -2.1
HLA-DQA1P01909 RNU2-49P-201ENST00000410666 184 ntBASIC1.91□□□□□ -2.1
HLA-DQA1P01909 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC1.91□□□□□ -2.1
HLA-DQA1P01909 HIGD1AP15-201ENST00000416198 280 ntBASIC1.91□□□□□ -2.1
HLA-DQA1P01909 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.91□□□□□ -2.1
HLA-DQA1P01909 SUMO1P4-201ENST00000429430 302 ntBASIC1.91□□□□□ -2.1
HLA-DQA1P01909 AL008629.1-201ENST00000438615 184 ntBASIC1.91□□□□□ -2.1
HLA-DQA1P01909 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.91□□□□□ -2.1
HLA-DQA1P01909 AC011816.1-201ENST00000441346 546 ntBASIC1.91□□□□□ -2.1
HLA-DQA1P01909 RPS24P13-201ENST00000442520 397 ntBASIC1.91□□□□□ -2.1
HLA-DQA1P01909 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.91□□□□□ -2.1
HLA-DQA1P01909 RPL26P9-201ENST00000457466 433 ntBASIC1.91□□□□□ -2.1
HLA-DQA1P01909 AC013267.1-201ENST00000458227 267 ntBASIC1.91□□□□□ -2.1
HLA-DQA1P01909 AC068587.2-201ENST00000478386 781 ntBASIC1.91□□□□□ -2.1
HLA-DQA1P01909 RPL23AP41-201ENST00000484754 458 ntBASIC1.91□□□□□ -2.1
HLA-DQA1P01909 RNA5SP165-201ENST00000517142 115 ntBASIC1.91□□□□□ -2.1
HLA-DQA1P01909 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.91□□□□□ -2.1
HLA-DQA1P01909 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.91□□□□□ -2.1
HLA-DQA1P01909 EEF1A1P37-201ENST00000522748 715 ntBASIC1.91□□□□□ -2.1
HLA-DQA1P01909 AP006587.4-201ENST00000526053 529 ntBASIC1.91□□□□□ -2.1
HLA-DQA1P01909 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.91□□□□□ -2.1
HLA-DQA1P01909 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.91□□□□□ -2.1
HLA-DQA1P01909 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC1.91□□□□□ -2.1
HLA-DQA1P01909 AC025281.1-201ENST00000567026 265 ntBASIC1.91□□□□□ -2.1
HLA-DQA1P01909 MIR3146-201ENST00000580367 79 ntBASIC1.91□□□□□ -2.1
HLA-DQA1P01909 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.91□□□□□ -2.1
HLA-DQA1P01909 AC022022.2-201ENST00000602989 360 ntBASIC1.91□□□□□ -2.1
HLA-DQA1P01909 AL161756.2-201ENST00000604597 246 ntBASIC1.91□□□□□ -2.1
HLA-DQA1P01909 AC090970.3-201ENST00000612566 866 ntBASIC1.91□□□□□ -2.1
HLA-DQA1P01909 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.91□□□□□ -2.1
HLA-DQA1P01909 AC034102.8-201ENST00000615146 484 ntBASIC1.91□□□□□ -2.1
HLA-DQA1P01909 AC009159.1-201ENST00000618386 642 ntBASIC1.91□□□□□ -2.1
HLA-DQA1P01909 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC1.91□□□□□ -2.1
HLA-DQA1P01909 AL356266.1-201ENST00000623311 483 ntBASIC1.91□□□□□ -2.1
HLA-DQA1P01909 AC068057.2-201ENST00000624047 895 ntBASIC1.91□□□□□ -2.1
HLA-DQA1P01909 AC017037.3-201ENST00000625016 472 ntBASIC1.91□□□□□ -2.1
HLA-DQA1P01909 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.91□□□□□ -2.1
HLA-DQA1P01909 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.91□□□□□ -2.1
HLA-DQA1P01909 U2.21-201ENST00000637295 81 ntBASIC1.91□□□□□ -2.1
HLA-DQA1P01909 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms