Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 GLYCAM1-201ENST00000546596 285 ntBASIC3.27□□□□□ -1.89
LDLRP01130 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.27□□□□□ -1.89
LDLRP01130 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.27□□□□□ -1.89
LDLRP01130 KC877982.1-201ENST00000602313 470 ntBASIC3.27□□□□□ -1.89
LDLRP01130 BNIP3P9-201ENST00000603714 553 ntBASIC3.27□□□□□ -1.89
LDLRP01130 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.27□□□□□ -1.89
LDLRP01130 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.27□□□□□ -1.89
LDLRP01130 MIR7851-201ENST00000610611 160 ntBASIC3.27□□□□□ -1.89
LDLRP01130 AC245517.5-201ENST00000611529 162 ntBASIC3.27□□□□□ -1.89
LDLRP01130 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.27□□□□□ -1.89
LDLRP01130 AC063943.3-201ENST00000615562 356 ntBASIC3.27□□□□□ -1.89
LDLRP01130 AL603758.1-201ENST00000618654 241 ntBASIC3.27□□□□□ -1.89
LDLRP01130 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
LDLRP01130 MIR6863-201ENST00000636112 90 ntBASIC3.27□□□□□ -1.89
LDLRP01130 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.27□□□□□ -1.89
LDLRP01130 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.27□□□□□ -1.89
LDLRP01130 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.27□□□□□ -1.89
LDLRP01130 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
LDLRP01130 AC009812.4-201ENST00000569134 1805 ntBASIC3.27□□□□□ -1.89
LDLRP01130 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LDLRP01130 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
LDLRP01130 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LDLRP01130 AC004972.1-201ENST00000623934 2209 ntBASIC3.27□□□□□ -1.89
LDLRP01130 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LDLRP01130 DDX10P1-201ENST00000448545 1933 ntBASIC3.27□□□□□ -1.89
LDLRP01130 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LDLRP01130 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LDLRP01130 U8.3-201ENST00000363321 132 ntBASIC3.26□□□□□ -1.89
LDLRP01130 RNU4-76P-201ENST00000364509 141 ntBASIC3.26□□□□□ -1.89
LDLRP01130 RNY3P13-201ENST00000365542 102 ntBASIC3.26□□□□□ -1.89
LDLRP01130 snosnR66.1-201ENST00000391095 99 ntBASIC3.26□□□□□ -1.89
LDLRP01130 MTCO3P40-201ENST00000392516 676 ntBASIC3.26□□□□□ -1.89
LDLRP01130 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.26□□□□□ -1.89
LDLRP01130 AL136372.1-201ENST00000403060 228 ntBASIC3.26□□□□□ -1.89
LDLRP01130 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.26□□□□□ -1.89
LDLRP01130 AL139413.1-201ENST00000421309 217 ntBASIC3.26□□□□□ -1.89
LDLRP01130 PPP1R11P2-201ENST00000423543 382 ntBASIC3.26□□□□□ -1.89
LDLRP01130 MTATP6P4-201ENST00000427725 675 ntBASIC3.26□□□□□ -1.89
LDLRP01130 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.26□□□□□ -1.89
LDLRP01130 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.26□□□□□ -1.89
LDLRP01130 RPL26P6-201ENST00000440913 438 ntBASIC3.26□□□□□ -1.89
LDLRP01130 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.26□□□□□ -1.89
LDLRP01130 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.26□□□□□ -1.89
LDLRP01130 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.26□□□□□ -1.89
LDLRP01130 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.26□□□□□ -1.89
LDLRP01130 MTND4LP22-201ENST00000508209 276 ntBASIC3.26□□□□□ -1.89
LDLRP01130 AC046134.1-201ENST00000514454 666 ntBASIC3.26□□□□□ -1.89
LDLRP01130 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.26□□□□□ -1.89
LDLRP01130 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.26□□□□□ -1.89
LDLRP01130 EIF4BP1-201ENST00000554881 351 ntBASIC3.26□□□□□ -1.89
LDLRP01130 MED28P6-201ENST00000558776 231 ntBASIC3.26□□□□□ -1.89
LDLRP01130 MIR4325-201ENST00000583049 90 ntBASIC3.26□□□□□ -1.89
LDLRP01130 DUXAP4-201ENST00000603046 613 ntBASIC3.26□□□□□ -1.89
LDLRP01130 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.26□□□□□ -1.89
LDLRP01130 AL359880.1-201ENST00000621879 266 ntBASIC3.26□□□□□ -1.89
LDLRP01130 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.26□□□□□ -1.89
LDLRP01130 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.26□□□□□ -1.89
LDLRP01130 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
LDLRP01130 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LDLRP01130 CASC19-280ENST00000642102 1351 ntBASIC3.25□□□□□ -1.89
LDLRP01130 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.25□□□□□ -1.89
LDLRP01130 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.25□□□□□ -1.89
LDLRP01130 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.25□□□□□ -1.89
LDLRP01130 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.25□□□□□ -1.89
LDLRP01130 SNORA23-201ENST00000365128 182 ntBASIC3.25□□□□□ -1.89
LDLRP01130 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
LDLRP01130 RNU6-76P-201ENST00000384060 104 ntBASIC3.25□□□□□ -1.89
LDLRP01130 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
LDLRP01130 RN7SKP53-201ENST00000411337 315 ntBASIC3.25□□□□□ -1.89
LDLRP01130 AL356968.1-201ENST00000416622 474 ntBASIC3.25□□□□□ -1.89
LDLRP01130 BX295541.1-201ENST00000417774 250 ntBASIC3.25□□□□□ -1.89
LDLRP01130 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LDLRP01130 AC007283.2-201ENST00000424739 197 ntBASIC3.25□□□□□ -1.89
LDLRP01130 ATP5JP1-201ENST00000431631 322 ntBASIC3.25□□□□□ -1.89
LDLRP01130 AC119618.1-201ENST00000434191 222 ntBASIC3.25□□□□□ -1.89
LDLRP01130 AL451074.3-201ENST00000437709 472 ntBASIC3.25□□□□□ -1.89
LDLRP01130 RABEPKP1-201ENST00000440529 1026 ntBASIC3.25□□□□□ -1.89
LDLRP01130 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.25□□□□□ -1.89
LDLRP01130 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.25□□□□□ -1.89
LDLRP01130 USP9YP15-201ENST00000442391 422 ntBASIC3.25□□□□□ -1.89
LDLRP01130 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.25□□□□□ -1.89
LDLRP01130 AC108059.3-201ENST00000456388 214 ntBASIC3.25□□□□□ -1.89
LDLRP01130 AC008481.1-201ENST00000463278 396 ntBASIC3.25□□□□□ -1.89
LDLRP01130 RPS3AP14-201ENST00000483907 780 ntBASIC3.25□□□□□ -1.89
LDLRP01130 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.25□□□□□ -1.89
LDLRP01130 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.25□□□□□ -1.89
LDLRP01130 AC010587.1-201ENST00000505809 469 ntBASIC3.25□□□□□ -1.89
LDLRP01130 AC009646.1-201ENST00000510455 318 ntBASIC3.25□□□□□ -1.89
LDLRP01130 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.25□□□□□ -1.89
LDLRP01130 SNORA31.8-201ENST00000516327 108 ntBASIC3.25□□□□□ -1.89
LDLRP01130 RNU6-358P-201ENST00000516564 75 ntBASIC3.25□□□□□ -1.89
LDLRP01130 SNORA31.22-201ENST00000517204 135 ntBASIC3.25□□□□□ -1.89
LDLRP01130 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.25□□□□□ -1.89
LDLRP01130 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.25□□□□□ -1.89
LDLRP01130 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.25□□□□□ -1.89
LDLRP01130 AC006116.10-201ENST00000591836 581 ntBASIC3.25□□□□□ -1.89
LDLRP01130 AC093838.1-201ENST00000613014 469 ntBASIC3.25□□□□□ -1.89
LDLRP01130 TUG1_2.1-201ENST00000614234 87 ntBASIC3.25□□□□□ -1.89
LDLRP01130 MIR7112-201ENST00000616126 65 ntBASIC3.25□□□□□ -1.89
LDLRP01130 AC068880.5-201ENST00000624331 290 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 179.7 ms