Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 AL714022.1-201ENST00000439897 151 ntBASIC1.76□□□□□ -2.13
CPSF4O95639 RPL7P36-201ENST00000444633 681 ntBASIC1.76□□□□□ -2.13
CPSF4O95639 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.76□□□□□ -2.13
CPSF4O95639 PTENP1-201ENST00000447117 1215 ntBASIC1.76□□□□□ -2.13
CPSF4O95639 AL009048.1-201ENST00000450437 298 ntBASIC1.76□□□□□ -2.13
CPSF4O95639 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.76□□□□□ -2.13
CPSF4O95639 AC092155.2-201ENST00000454675 477 ntBASIC1.76□□□□□ -2.13
CPSF4O95639 USP9YP10-201ENST00000454868 628 ntBASIC1.76□□□□□ -2.13
CPSF4O95639 ATG12P2-201ENST00000456830 416 ntBASIC1.76□□□□□ -2.13
CPSF4O95639 AC116337.2-201ENST00000477662 156 ntBASIC1.76□□□□□ -2.13
CPSF4O95639 UBE2V1P12-201ENST00000503954 474 ntBASIC1.76□□□□□ -2.13
CPSF4O95639 ANXA2P1-201ENST00000505539 926 ntBASIC1.76□□□□□ -2.13
CPSF4O95639 AC008716.1-201ENST00000511084 513 ntBASIC1.76□□□□□ -2.13
CPSF4O95639 AC010587.2-201ENST00000511727 448 ntBASIC1.76□□□□□ -2.13
CPSF4O95639 OR5BM1P-201ENST00000512021 366 ntBASIC1.76□□□□□ -2.13
CPSF4O95639 MTATP6P9-201ENST00000515039 680 ntBASIC1.76□□□□□ -2.13
CPSF4O95639 RNU6-1282P-201ENST00000516735 96 ntBASIC1.76□□□□□ -2.13
CPSF4O95639 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.76□□□□□ -2.13
CPSF4O95639 AP002748.2-201ENST00000528671 348 ntBASIC1.76□□□□□ -2.13
CPSF4O95639 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.76□□□□□ -2.13
CPSF4O95639 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.76□□□□□ -2.13
CPSF4O95639 AC090888.1-201ENST00000561335 1141 ntBASIC1.76□□□□□ -2.13
CPSF4O95639 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.76□□□□□ -2.13
CPSF4O95639 AC106052.1-201ENST00000608029 497 ntBASIC1.76□□□□□ -2.13
CPSF4O95639 AC103710.4-201ENST00000609301 899 ntBASIC1.76□□□□□ -2.13
CPSF4O95639 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.76□□□□□ -2.13
CPSF4O95639 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
CPSF4O95639 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.76□□□□□ -2.13
CPSF4O95639 AP000776.1-201ENST00000530032 1663 ntBASIC1.76□□□□□ -2.13
CPSF4O95639 AC092447.10-201ENST00000620607 1652 ntBASIC1.76□□□□□ -2.13
CPSF4O95639 ZNF658B-202ENST00000615961 3375 ntBASIC1.76□□□□□ -2.13
CPSF4O95639 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.75□□□□□ -2.13
CPSF4O95639 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CPSF4O95639 AC008669.1-201ENST00000565823 2178 ntBASIC1.75□□□□□ -2.13
CPSF4O95639 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.75□□□□□ -2.13
CPSF4O95639 RNU6-636P-201ENST00000384598 107 ntBASIC1.75□□□□□ -2.13
CPSF4O95639 RNU6-925P-201ENST00000384629 104 ntBASIC1.75□□□□□ -2.13
CPSF4O95639 MIR634-201ENST00000385208 97 ntBASIC1.75□□□□□ -2.13
CPSF4O95639 RNU6-516P-201ENST00000411381 104 ntBASIC1.75□□□□□ -2.13
CPSF4O95639 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.75□□□□□ -2.13
CPSF4O95639 AC099548.1-201ENST00000421443 426 ntBASIC1.75□□□□□ -2.13
CPSF4O95639 AL445685.2-201ENST00000422551 342 ntBASIC1.75□□□□□ -2.13
CPSF4O95639 AC009414.1-201ENST00000427200 443 ntBASIC1.75□□□□□ -2.13
CPSF4O95639 USP9YP24-201ENST00000434374 697 ntBASIC1.75□□□□□ -2.13
CPSF4O95639 UBE2D3P1-201ENST00000436669 444 ntBASIC1.75□□□□□ -2.13
CPSF4O95639 ARPC3P1-201ENST00000437218 533 ntBASIC1.75□□□□□ -2.13
CPSF4O95639 AL451074.3-201ENST00000437709 472 ntBASIC1.75□□□□□ -2.13
CPSF4O95639 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.75□□□□□ -2.13
CPSF4O95639 USP9YP17-201ENST00000444617 696 ntBASIC1.75□□□□□ -2.13
CPSF4O95639 DDX3P2-201ENST00000446138 111 ntBASIC1.75□□□□□ -2.13
CPSF4O95639 MTCO1P27-201ENST00000448269 226 ntBASIC1.75□□□□□ -2.13
CPSF4O95639 MTND1P9-201ENST00000453775 944 ntBASIC1.75□□□□□ -2.13
CPSF4O95639 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.75□□□□□ -2.13
CPSF4O95639 USP9YP25-201ENST00000457708 443 ntBASIC1.75□□□□□ -2.13
CPSF4O95639 RPS20P20-201ENST00000460498 340 ntBASIC1.75□□□□□ -2.13
CPSF4O95639 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.75□□□□□ -2.13
CPSF4O95639 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC1.75□□□□□ -2.13
CPSF4O95639 AC119751.4-201ENST00000507498 357 ntBASIC1.75□□□□□ -2.13
CPSF4O95639 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.75□□□□□ -2.13
CPSF4O95639 RNU6-840P-201ENST00000517275 65 ntBASIC1.75□□□□□ -2.13
CPSF4O95639 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.75□□□□□ -2.13
CPSF4O95639 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.75□□□□□ -2.13
CPSF4O95639 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.75□□□□□ -2.13
CPSF4O95639 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.75□□□□□ -2.13
CPSF4O95639 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.75□□□□□ -2.13
CPSF4O95639 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.75□□□□□ -2.13
CPSF4O95639 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.75□□□□□ -2.13
CPSF4O95639 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CPSF4O95639 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.75□□□□□ -2.13
CPSF4O95639 AC010546.1-201ENST00000569391 485 ntBASIC1.75□□□□□ -2.13
CPSF4O95639 MIR4419B-201ENST00000577260 68 ntBASIC1.75□□□□□ -2.13
CPSF4O95639 AC022662.1-201ENST00000580252 331 ntBASIC1.75□□□□□ -2.13
CPSF4O95639 MIR4435-1-201ENST00000582552 80 ntBASIC1.75□□□□□ -2.13
CPSF4O95639 OR1M4P-201ENST00000589199 287 ntBASIC1.75□□□□□ -2.13
CPSF4O95639 AC068790.3-201ENST00000602988 553 ntBASIC1.75□□□□□ -2.13
CPSF4O95639 MIR6840-201ENST00000611937 71 ntBASIC1.75□□□□□ -2.13
CPSF4O95639 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.75□□□□□ -2.13
CPSF4O95639 AC009268.2-201ENST00000621925 457 ntBASIC1.75□□□□□ -2.13
CPSF4O95639 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.75□□□□□ -2.13
CPSF4O95639 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.75□□□□□ -2.13
CPSF4O95639 AC073308.1-201ENST00000623696 305 ntBASIC1.75□□□□□ -2.13
CPSF4O95639 AC019226.1-201ENST00000625666 515 ntBASIC1.75□□□□□ -2.13
CPSF4O95639 AC010149.2-201ENST00000637608 315 ntBASIC1.75□□□□□ -2.13
CPSF4O95639 AC099063.3-201ENST00000642066 185 ntBASIC1.75□□□□□ -2.13
CPSF4O95639 AC135776.4-201ENST00000624300 1904 ntBASIC1.75□□□□□ -2.13
CPSF4O95639 AL138713.1-201ENST00000624026 2130 ntBASIC1.75□□□□□ -2.13
CPSF4O95639 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CPSF4O95639 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
CPSF4O95639 RN7SKP226-201ENST00000364912 300 ntBASIC1.74□□□□□ -2.13
CPSF4O95639 RNU6-253P-201ENST00000384730 105 ntBASIC1.74□□□□□ -2.13
CPSF4O95639 RNU6-754P-201ENST00000391166 107 ntBASIC1.74□□□□□ -2.13
CPSF4O95639 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CPSF4O95639 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.74□□□□□ -2.13
CPSF4O95639 AL365496.1-201ENST00000426885 215 ntBASIC1.74□□□□□ -2.13
CPSF4O95639 HSFY7P-201ENST00000432672 318 ntBASIC1.74□□□□□ -2.13
CPSF4O95639 HSFY8P-201ENST00000437934 318 ntBASIC1.74□□□□□ -2.13
CPSF4O95639 AL117351.1-201ENST00000438864 766 ntBASIC1.74□□□□□ -2.13
CPSF4O95639 AC004854.1-201ENST00000440356 349 ntBASIC1.74□□□□□ -2.13
CPSF4O95639 BNIP3P2-201ENST00000441221 577 ntBASIC1.74□□□□□ -2.13
CPSF4O95639 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 9.3 ms