Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AC093801.2-201ENST00000503966 1050 ntBASIC1.07□□□□□ -2.24
ABCA1O95477 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.07□□□□□ -2.24
ABCA1O95477 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.07□□□□□ -2.24
ABCA1O95477 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.07□□□□□ -2.24
ABCA1O95477 AC068135.2-201ENST00000569293 1028 ntBASIC1.07□□□□□ -2.24
ABCA1O95477 MIR5571-201ENST00000577998 113 ntBASIC1.07□□□□□ -2.24
ABCA1O95477 HMGB1P24-202ENST00000615653 685 ntBASIC1.07□□□□□ -2.24
ABCA1O95477 AC098657.3-201ENST00000620434 263 ntBASIC1.07□□□□□ -2.24
ABCA1O95477 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
ABCA1O95477 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.07□□□□□ -2.24
ABCA1O95477 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
ABCA1O95477 RNU4-78P-201ENST00000410940 126 ntBASIC1.06□□□□□ -2.24
ABCA1O95477 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.06□□□□□ -2.24
ABCA1O95477 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.06□□□□□ -2.24
ABCA1O95477 AL356867.1-201ENST00000429623 299 ntBASIC1.06□□□□□ -2.24
ABCA1O95477 USP12PX-201ENST00000432383 1057 ntBASIC1.06□□□□□ -2.24
ABCA1O95477 PSPHP1-201ENST00000450062 261 ntBASIC1.06□□□□□ -2.24
ABCA1O95477 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.06□□□□□ -2.24
ABCA1O95477 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.06□□□□□ -2.24
ABCA1O95477 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.06□□□□□ -2.24
ABCA1O95477 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.06□□□□□ -2.24
ABCA1O95477 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.06□□□□□ -2.24
ABCA1O95477 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC1.06□□□□□ -2.24
ABCA1O95477 AL391261.3-201ENST00000557194 520 ntBASIC1.06□□□□□ -2.24
ABCA1O95477 AC105224.1-201ENST00000587055 421 ntBASIC1.06□□□□□ -2.24
ABCA1O95477 AL669831.4-202ENST00000590817 238 ntBASIC1.06□□□□□ -2.24
ABCA1O95477 AC021749.1-201ENST00000604322 607 ntBASIC1.06□□□□□ -2.24
ABCA1O95477 AP002826.1-201ENST00000608835 315 ntBASIC1.06□□□□□ -2.24
ABCA1O95477 AC010329.5-201ENST00000623497 2174 ntBASIC1.06□□□□□ -2.24
ABCA1O95477 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
ABCA1O95477 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.06□□□□□ -2.24
ABCA1O95477 AC008555.8-201ENST00000623602 2168 ntBASIC1.06□□□□□ -2.24
ABCA1O95477 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
ABCA1O95477 RNU6-989P-201ENST00000362756 107 ntBASIC1.06□□□□□ -2.24
ABCA1O95477 AC004383.1-201ENST00000438135 289 ntBASIC1.06□□□□□ -2.24
ABCA1O95477 SNRPGP13-201ENST00000442212 177 ntBASIC1.06□□□□□ -2.24
ABCA1O95477 AL589880.1-201ENST00000448271 287 ntBASIC1.06□□□□□ -2.24
ABCA1O95477 HMGN3P1-201ENST00000453847 193 ntBASIC1.06□□□□□ -2.24
ABCA1O95477 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.06□□□□□ -2.24
ABCA1O95477 AC006390.1-201ENST00000508068 283 ntBASIC1.06□□□□□ -2.24
ABCA1O95477 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.06□□□□□ -2.24
ABCA1O95477 RNA5SP471-201ENST00000516971 106 ntBASIC1.06□□□□□ -2.24
ABCA1O95477 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.06□□□□□ -2.24
ABCA1O95477 AC074051.3-201ENST00000570238 358 ntBASIC1.06□□□□□ -2.24
ABCA1O95477 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.06□□□□□ -2.24
ABCA1O95477 MIR6078-201ENST00000611069 100 ntBASIC1.06□□□□□ -2.24
ABCA1O95477 AC018926.3-201ENST00000618841 406 ntBASIC1.06□□□□□ -2.24
ABCA1O95477 AC091895.1-201ENST00000624494 256 ntBASIC1.06□□□□□ -2.24
ABCA1O95477 AC119674.1-220ENST00000641502 1048 ntBASIC1.06□□□□□ -2.24
ABCA1O95477 CDC27P3-201ENST00000635418 1910 ntBASIC1.06□□□□□ -2.24
ABCA1O95477 RNU6-339P-201ENST00000384310 107 ntBASIC1.05□□□□□ -2.24
ABCA1O95477 RNY1P4-201ENST00000384595 115 ntBASIC1.05□□□□□ -2.24
ABCA1O95477 CIR1P3-201ENST00000405137 479 ntBASIC1.05□□□□□ -2.24
ABCA1O95477 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.05□□□□□ -2.24
ABCA1O95477 AC079780.1-201ENST00000428259 207 ntBASIC1.05□□□□□ -2.24
ABCA1O95477 HMGB1P9-201ENST00000429856 646 ntBASIC1.05□□□□□ -2.24
ABCA1O95477 VN1R108P-201ENST00000431580 830 ntBASIC1.05□□□□□ -2.24
ABCA1O95477 RPL35AP22-201ENST00000436855 335 ntBASIC1.05□□□□□ -2.24
ABCA1O95477 SNORD19.2-201ENST00000516978 73 ntBASIC1.05□□□□□ -2.24
ABCA1O95477 SNORA31.23-201ENST00000517219 133 ntBASIC1.05□□□□□ -2.24
ABCA1O95477 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.05□□□□□ -2.24
ABCA1O95477 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.05□□□□□ -2.24
ABCA1O95477 AC118273.2-201ENST00000532092 465 ntBASIC1.05□□□□□ -2.24
ABCA1O95477 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.05□□□□□ -2.24
ABCA1O95477 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
ABCA1O95477 AL022578.1-201ENST00000439330 1433 ntBASIC1.05□□□□□ -2.24
ABCA1O95477 MTCO1P48-201ENST00000448024 1096 ntBASIC1.05□□□□□ -2.24
ABCA1O95477 RPL31P60-201ENST00000478450 367 ntBASIC1.05□□□□□ -2.24
ABCA1O95477 MRPS17P9-201ENST00000511924 393 ntBASIC1.05□□□□□ -2.24
ABCA1O95477 RNU6-798P-201ENST00000516912 103 ntBASIC1.05□□□□□ -2.24
ABCA1O95477 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.05□□□□□ -2.24
ABCA1O95477 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.05□□□□□ -2.24
ABCA1O95477 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
ABCA1O95477 AC011260.1-201ENST00000578420 472 ntBASIC1.05□□□□□ -2.24
ABCA1O95477 AC012254.4-201ENST00000588843 273 ntBASIC1.05□□□□□ -2.24
ABCA1O95477 AC012443.1-201ENST00000605605 231 ntBASIC1.05□□□□□ -2.24
ABCA1O95477 AC006213.4-201ENST00000616184 634 ntBASIC1.05□□□□□ -2.24
ABCA1O95477 AC017104.5-201ENST00000637647 639 ntBASIC1.05□□□□□ -2.24
ABCA1O95477 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
ABCA1O95477 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.05□□□□□ -2.24
ABCA1O95477 RNU6-1105P-201ENST00000384774 107 ntBASIC1.04□□□□□ -2.24
ABCA1O95477 SNORA46.1-201ENST00000391069 153 ntBASIC1.04□□□□□ -2.24
ABCA1O95477 RPS3AP24-201ENST00000407896 734 ntBASIC1.04□□□□□ -2.24
ABCA1O95477 PGBD4P6-201ENST00000421501 610 ntBASIC1.04□□□□□ -2.24
ABCA1O95477 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.04□□□□□ -2.24
ABCA1O95477 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.04□□□□□ -2.24
ABCA1O95477 MTATP6P7-201ENST00000453315 681 ntBASIC1.04□□□□□ -2.24
ABCA1O95477 RNU7-23P-201ENST00000459465 62 ntBASIC1.04□□□□□ -2.24
ABCA1O95477 AC114801.2-201ENST00000503825 781 ntBASIC1.04□□□□□ -2.24
ABCA1O95477 AC023141.11-201ENST00000508864 202 ntBASIC1.04□□□□□ -2.24
ABCA1O95477 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
ABCA1O95477 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.04□□□□□ -2.24
ABCA1O95477 NDUFS5P6-201ENST00000529136 295 ntBASIC1.04□□□□□ -2.24
ABCA1O95477 OR8K4P-201ENST00000534608 872 ntBASIC1.04□□□□□ -2.24
ABCA1O95477 AC016957.1-201ENST00000534895 309 ntBASIC1.04□□□□□ -2.24
ABCA1O95477 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.04□□□□□ -2.24
ABCA1O95477 AC004217.3-201ENST00000551552 878 ntBASIC1.04□□□□□ -2.24
ABCA1O95477 MIR4529-201ENST00000578110 78 ntBASIC1.04□□□□□ -2.24
ABCA1O95477 AC024619.4-201ENST00000580924 316 ntBASIC1.04□□□□□ -2.24
ABCA1O95477 AL137246.1-201ENST00000607072 977 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms