Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 RNY3P10-201ENST00000384764 102 ntBASIC3.48□□□□□ -1.85
MBD4O95243 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.48□□□□□ -1.85
MBD4O95243 HMGN1P14-201ENST00000412459 517 ntBASIC3.48□□□□□ -1.85
MBD4O95243 AC090960.1-201ENST00000421072 306 ntBASIC3.48□□□□□ -1.85
MBD4O95243 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
MBD4O95243 AL589872.1-201ENST00000426602 288 ntBASIC3.48□□□□□ -1.85
MBD4O95243 OR2AS1P-201ENST00000427827 319 ntBASIC3.48□□□□□ -1.85
MBD4O95243 PGBD4P3-201ENST00000440731 581 ntBASIC3.48□□□□□ -1.85
MBD4O95243 RPS27AP8-201ENST00000452665 445 ntBASIC3.48□□□□□ -1.85
MBD4O95243 RPL12P25-201ENST00000455592 494 ntBASIC3.48□□□□□ -1.85
MBD4O95243 RNU6-953P-201ENST00000459154 107 ntBASIC3.48□□□□□ -1.85
MBD4O95243 snoU109.1-201ENST00000459339 135 ntBASIC3.48□□□□□ -1.85
MBD4O95243 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.48□□□□□ -1.85
MBD4O95243 AC114786.4-201ENST00000508771 728 ntBASIC3.48□□□□□ -1.85
MBD4O95243 AC119751.5-201ENST00000514077 770 ntBASIC3.48□□□□□ -1.85
MBD4O95243 AC068657.1-201ENST00000520807 306 ntBASIC3.48□□□□□ -1.85
MBD4O95243 AC245166.1-201ENST00000521012 253 ntBASIC3.48□□□□□ -1.85
MBD4O95243 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.48□□□□□ -1.85
MBD4O95243 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.48□□□□□ -1.85
MBD4O95243 CYCSP39-201ENST00000565821 309 ntBASIC3.48□□□□□ -1.85
MBD4O95243 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.48□□□□□ -1.85
MBD4O95243 MIR3682-201ENST00000581338 84 ntBASIC3.48□□□□□ -1.85
MBD4O95243 AC007619.2-201ENST00000605743 379 ntBASIC3.48□□□□□ -1.85
MBD4O95243 AC007998.5-201ENST00000622938 237 ntBASIC3.48□□□□□ -1.85
MBD4O95243 AP003399.1-201ENST00000637534 361 ntBASIC3.48□□□□□ -1.85
MBD4O95243 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.47□□□□□ -1.85
MBD4O95243 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.47□□□□□ -1.85
MBD4O95243 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.47□□□□□ -1.85
MBD4O95243 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.47□□□□□ -1.85
MBD4O95243 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
MBD4O95243 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
MBD4O95243 MIR148B-201ENST00000362252 99 ntBASIC3.47□□□□□ -1.85
MBD4O95243 RNU4-1-201ENST00000363925 141 ntBASIC3.47□□□□□ -1.85
MBD4O95243 RPL23AP32-201ENST00000395315 459 ntBASIC3.47□□□□□ -1.85
MBD4O95243 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.47□□□□□ -1.85
MBD4O95243 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.47□□□□□ -1.85
MBD4O95243 ISCA1P1-201ENST00000426679 387 ntBASIC3.47□□□□□ -1.85
MBD4O95243 GPM6BP2-201ENST00000432046 144 ntBASIC3.47□□□□□ -1.85
MBD4O95243 HMGB3P12-201ENST00000438745 556 ntBASIC3.47□□□□□ -1.85
MBD4O95243 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.47□□□□□ -1.85
MBD4O95243 MTND6P13-201ENST00000443510 523 ntBASIC3.47□□□□□ -1.85
MBD4O95243 GPM6BP1-201ENST00000446387 144 ntBASIC3.47□□□□□ -1.85
MBD4O95243 RN7SL75P-201ENST00000461926 281 ntBASIC3.47□□□□□ -1.85
MBD4O95243 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.47□□□□□ -1.85
MBD4O95243 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.47□□□□□ -1.85
MBD4O95243 MTND1P3-201ENST00000484956 952 ntBASIC3.47□□□□□ -1.85
MBD4O95243 RNA5SP471-201ENST00000516971 106 ntBASIC3.47□□□□□ -1.85
MBD4O95243 AC060788.1-201ENST00000521318 469 ntBASIC3.47□□□□□ -1.85
MBD4O95243 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.47□□□□□ -1.85
MBD4O95243 AC007363.1-201ENST00000604736 620 ntBASIC3.47□□□□□ -1.85
MBD4O95243 AC107294.3-201ENST00000609211 526 ntBASIC3.47□□□□□ -1.85
MBD4O95243 AC025594.3-201ENST00000613068 790 ntBASIC3.47□□□□□ -1.85
MBD4O95243 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.47□□□□□ -1.85
MBD4O95243 AL589994.2-201ENST00000621124 579 ntBASIC3.47□□□□□ -1.85
MBD4O95243 AL603839.4-201ENST00000624658 1005 ntBASIC3.47□□□□□ -1.85
MBD4O95243 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.47□□□□□ -1.85
MBD4O95243 AC110079.1-202ENST00000635213 138 ntBASIC3.47□□□□□ -1.85
MBD4O95243 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
MBD4O95243 AP003122.5-201ENST00000527668 3766 ntBASIC3.47□□□□□ -1.85
MBD4O95243 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.85
MBD4O95243 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
MBD4O95243 AC096644.4-201ENST00000563417 2912 ntBASIC3.46□□□□□ -1.86
MBD4O95243 RNU5E-1-201ENST00000362477 120 ntBASIC3.46□□□□□ -1.86
MBD4O95243 AL139397.2-201ENST00000404529 772 ntBASIC3.46□□□□□ -1.86
MBD4O95243 RPS3AP3-201ENST00000411933 242 ntBASIC3.46□□□□□ -1.86
MBD4O95243 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.46□□□□□ -1.86
MBD4O95243 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.46□□□□□ -1.86
MBD4O95243 AL365496.1-201ENST00000426885 215 ntBASIC3.46□□□□□ -1.86
MBD4O95243 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.46□□□□□ -1.86
MBD4O95243 USP9YP15-201ENST00000442391 422 ntBASIC3.46□□□□□ -1.86
MBD4O95243 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.46□□□□□ -1.86
MBD4O95243 RPL26P9-201ENST00000457466 433 ntBASIC3.46□□□□□ -1.86
MBD4O95243 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.46□□□□□ -1.86
MBD4O95243 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.46□□□□□ -1.86
MBD4O95243 HIGD1AP13-201ENST00000509878 289 ntBASIC3.46□□□□□ -1.86
MBD4O95243 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.46□□□□□ -1.86
MBD4O95243 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.46□□□□□ -1.86
MBD4O95243 RNA5SP385-201ENST00000515947 110 ntBASIC3.46□□□□□ -1.86
MBD4O95243 RNU1-103P-201ENST00000516502 125 ntBASIC3.46□□□□□ -1.86
MBD4O95243 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.46□□□□□ -1.86
MBD4O95243 AL358072.1-201ENST00000604156 575 ntBASIC3.46□□□□□ -1.86
MBD4O95243 AC104763.2-201ENST00000604179 382 ntBASIC3.46□□□□□ -1.86
MBD4O95243 AC004805.2-201ENST00000605382 482 ntBASIC3.46□□□□□ -1.86
MBD4O95243 AL451064.1-201ENST00000607718 471 ntBASIC3.46□□□□□ -1.86
MBD4O95243 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.46□□□□□ -1.86
MBD4O95243 AC008250.2-201ENST00000615261 205 ntBASIC3.46□□□□□ -1.86
MBD4O95243 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.46□□□□□ -1.86
MBD4O95243 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.46□□□□□ -1.86
MBD4O95243 RNU6-960P-201ENST00000364056 120 ntBASIC3.45□□□□□ -1.86
MBD4O95243 RNU6-851P-201ENST00000384565 107 ntBASIC3.45□□□□□ -1.86
MBD4O95243 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
MBD4O95243 U3.26-201ENST00000391236 204 ntBASIC3.45□□□□□ -1.86
MBD4O95243 RNA5SP354-201ENST00000391247 136 ntBASIC3.45□□□□□ -1.86
MBD4O95243 RNU2-68P-201ENST00000410878 191 ntBASIC3.45□□□□□ -1.86
MBD4O95243 AC009518.2-201ENST00000418056 731 ntBASIC3.45□□□□□ -1.86
MBD4O95243 ELOCP4-201ENST00000420090 333 ntBASIC3.45□□□□□ -1.86
MBD4O95243 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.45□□□□□ -1.86
MBD4O95243 HMGN2P30-201ENST00000423237 256 ntBASIC3.45□□□□□ -1.86
MBD4O95243 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.45□□□□□ -1.86
MBD4O95243 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms