Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 MIR6718-201ENST00000616153 80 ntBASIC0.35□□□□□ -2.35
USH2AO75445 RNA5SP212-201ENST00000391223 107 ntBASIC0.34□□□□□ -2.35
USH2AO75445 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC0.34□□□□□ -2.35
USH2AO75445 AC112198.4-201ENST00000515450 351 ntBASIC0.34□□□□□ -2.35
USH2AO75445 SNORA14.1-201ENST00000516113 141 ntBASIC0.34□□□□□ -2.35
USH2AO75445 MIR4474-201ENST00000579189 78 ntBASIC0.34□□□□□ -2.35
USH2AO75445 AC243829.3-201ENST00000622177 108 ntBASIC0.34□□□□□ -2.35
USH2AO75445 EFTUD1P2-201ENST00000514817 1603 ntBASIC0.34□□□□□ -2.35
USH2AO75445 Y_RNA.447-201ENST00000384184 113 ntBASIC0.34□□□□□ -2.35
USH2AO75445 RNU6-733P-201ENST00000410759 104 ntBASIC0.34□□□□□ -2.35
USH2AO75445 HSPE1P1-201ENST00000421494 318 ntBASIC0.34□□□□□ -2.35
USH2AO75445 Y_RNA.659-201ENST00000515994 113 ntBASIC0.34□□□□□ -2.35
USH2AO75445 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.34□□□□□ -2.35
USH2AO75445 AC004812.1-201ENST00000540773 146 ntBASIC0.34□□□□□ -2.35
USH2AO75445 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC0.34□□□□□ -2.35
USH2AO75445 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.34□□□□□ -2.35
USH2AO75445 RNU1-101P-201ENST00000391171 127 ntBASIC0.34□□□□□ -2.36
USH2AO75445 AC118469.1-201ENST00000442943 488 ntBASIC0.34□□□□□ -2.36
USH2AO75445 PTENP1-201ENST00000447117 1215 ntBASIC0.34□□□□□ -2.36
USH2AO75445 SNORD59.2-201ENST00000516873 68 ntBASIC0.34□□□□□ -2.36
USH2AO75445 OSBPL9P3-201ENST00000534523 595 ntBASIC0.34□□□□□ -2.36
USH2AO75445 AC073055.1-201ENST00000456901 1621 ntBASIC0.34□□□□□ -2.36
USH2AO75445 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.34□□□□□ -2.36
USH2AO75445 BX682237.1-201ENST00000415016 335 ntBASIC0.34□□□□□ -2.36
USH2AO75445 AL353689.1-201ENST00000438895 199 ntBASIC0.34□□□□□ -2.36
USH2AO75445 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC0.34□□□□□ -2.36
USH2AO75445 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC0.34□□□□□ -2.36
USH2AO75445 AC012170.1-201ENST00000495139 359 ntBASIC0.34□□□□□ -2.36
USH2AO75445 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.34□□□□□ -2.36
USH2AO75445 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
USH2AO75445 AP000776.1-201ENST00000530032 1663 ntBASIC0.34□□□□□ -2.36
USH2AO75445 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
USH2AO75445 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.33□□□□□ -2.36
USH2AO75445 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.33□□□□□ -2.36
USH2AO75445 AL121578.1-201ENST00000428051 892 ntBASIC0.33□□□□□ -2.36
USH2AO75445 UBBP3-201ENST00000445497 241 ntBASIC0.33□□□□□ -2.36
USH2AO75445 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC0.33□□□□□ -2.36
USH2AO75445 RPL21P93-201ENST00000480465 489 ntBASIC0.33□□□□□ -2.36
USH2AO75445 AC233702.1-201ENST00000482905 502 ntBASIC0.33□□□□□ -2.36
USH2AO75445 AC093591.1-201ENST00000491435 481 ntBASIC0.33□□□□□ -2.36
USH2AO75445 MTCO1P30-201ENST00000515244 580 ntBASIC0.33□□□□□ -2.36
USH2AO75445 RNU6-1004P-201ENST00000516584 111 ntBASIC0.33□□□□□ -2.36
USH2AO75445 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC0.33□□□□□ -2.36
USH2AO75445 MIR4716-201ENST00000579628 84 ntBASIC0.33□□□□□ -2.36
USH2AO75445 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC0.33□□□□□ -2.36
USH2AO75445 AC022079.2-201ENST00000619739 566 ntBASIC0.33□□□□□ -2.36
USH2AO75445 MIR4278-201ENST00000636094 69 ntBASIC0.33□□□□□ -2.36
USH2AO75445 SNORD56.5-201ENST00000364281 72 ntBASIC0.33□□□□□ -2.36
USH2AO75445 RNU4-67P-201ENST00000364569 141 ntBASIC0.33□□□□□ -2.36
USH2AO75445 RNY4P7-201ENST00000364600 96 ntBASIC0.33□□□□□ -2.36
USH2AO75445 SNORA6-201ENST00000384033 151 ntBASIC0.33□□□□□ -2.36
USH2AO75445 SNORA51.6-201ENST00000384151 125 ntBASIC0.33□□□□□ -2.36
USH2AO75445 MIR150-201ENST00000385048 84 ntBASIC0.33□□□□□ -2.36
USH2AO75445 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.33□□□□□ -2.36
USH2AO75445 BZW1P2-201ENST00000473537 826 ntBASIC0.33□□□□□ -2.36
USH2AO75445 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC0.33□□□□□ -2.36
USH2AO75445 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
USH2AO75445 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.33□□□□□ -2.36
USH2AO75445 RBM43P1-201ENST00000476891 1081 ntBASIC0.33□□□□□ -2.36
USH2AO75445 AC020699.1-201ENST00000505161 445 ntBASIC0.33□□□□□ -2.36
USH2AO75445 AC118282.2-201ENST00000508739 374 ntBASIC0.33□□□□□ -2.36
USH2AO75445 SNORA3.4-201ENST00000515969 96 ntBASIC0.33□□□□□ -2.36
USH2AO75445 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.33□□□□□ -2.36
USH2AO75445 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.33□□□□□ -2.36
USH2AO75445 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.33□□□□□ -2.36
USH2AO75445 AL157700.1-201ENST00000561973 1432 ntBASIC0.33□□□□□ -2.36
USH2AO75445 RNA5SP98-201ENST00000363158 137 ntBASIC0.33□□□□□ -2.36
USH2AO75445 RNU4-72P-201ENST00000410754 173 ntBASIC0.33□□□□□ -2.36
USH2AO75445 AC092745.2-202ENST00000411880 369 ntBASIC0.33□□□□□ -2.36
USH2AO75445 ARPC3P2-201ENST00000457786 533 ntBASIC0.33□□□□□ -2.36
USH2AO75445 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC0.33□□□□□ -2.36
USH2AO75445 AC067940.1-201ENST00000458411 300 ntBASIC0.33□□□□□ -2.36
USH2AO75445 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.33□□□□□ -2.36
USH2AO75445 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC0.33□□□□□ -2.36
USH2AO75445 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.33□□□□□ -2.36
USH2AO75445 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
USH2AO75445 RPS15AP11-201ENST00000594193 385 ntBASIC0.33□□□□□ -2.36
USH2AO75445 AC004987.4-201ENST00000603383 338 ntBASIC0.33□□□□□ -2.36
USH2AO75445 AC112503.2-201ENST00000609005 552 ntBASIC0.33□□□□□ -2.36
USH2AO75445 OR4G3P-201ENST00000633500 913 ntBASIC0.33□□□□□ -2.36
USH2AO75445 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.33□□□□□ -2.36
USH2AO75445 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.33□□□□□ -2.36
USH2AO75445 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
USH2AO75445 RNU4-32P-201ENST00000363404 141 ntBASIC0.32□□□□□ -2.36
USH2AO75445 Y_RNA.293-201ENST00000364908 93 ntBASIC0.32□□□□□ -2.36
USH2AO75445 AL355497.1-201ENST00000406262 551 ntBASIC0.32□□□□□ -2.36
USH2AO75445 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.32□□□□□ -2.36
USH2AO75445 AC093716.1-201ENST00000435923 377 ntBASIC0.32□□□□□ -2.36
USH2AO75445 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.32□□□□□ -2.36
USH2AO75445 BTF3P12-201ENST00000519620 469 ntBASIC0.32□□□□□ -2.36
USH2AO75445 AC239860.2-201ENST00000525886 270 ntBASIC0.32□□□□□ -2.36
USH2AO75445 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC0.32□□□□□ -2.36
USH2AO75445 AC106028.5-201ENST00000610332 395 ntBASIC0.32□□□□□ -2.36
USH2AO75445 MTND4P27-201ENST00000450813 1354 ntBASIC0.32□□□□□ -2.36
USH2AO75445 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
USH2AO75445 ZNF702P-202ENST00000434269 1966 ntBASIC0.32□□□□□ -2.36
USH2AO75445 Y_RNA.352-201ENST00000365439 102 ntBASIC0.32□□□□□ -2.36
USH2AO75445 RN7SKP142-201ENST00000411236 328 ntBASIC0.32□□□□□ -2.36
USH2AO75445 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC0.32□□□□□ -2.36
USH2AO75445 AL121601.2-201ENST00000438019 707 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms