Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.26□□□□□ -1.89
LDB3O75112 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.26□□□□□ -1.89
LDB3O75112 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.26□□□□□ -1.89
LDB3O75112 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.26□□□□□ -1.89
LDB3O75112 AP001029.3-201ENST00000588063 596 ntBASIC3.26□□□□□ -1.89
LDB3O75112 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.26□□□□□ -1.89
LDB3O75112 AC110741.2-201ENST00000605278 268 ntBASIC3.26□□□□□ -1.89
LDB3O75112 AL121992.2-201ENST00000606262 256 ntBASIC3.26□□□□□ -1.89
LDB3O75112 AC064836.2-201ENST00000609491 462 ntBASIC3.26□□□□□ -1.89
LDB3O75112 DISC2.1-201ENST00000612827 205 ntBASIC3.26□□□□□ -1.89
LDB3O75112 AL450472.3-201ENST00000615578 367 ntBASIC3.26□□□□□ -1.89
LDB3O75112 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
LDB3O75112 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
LDB3O75112 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LDB3O75112 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.26□□□□□ -1.89
LDB3O75112 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.26□□□□□ -1.89
LDB3O75112 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LDB3O75112 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
LDB3O75112 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
LDB3O75112 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
LDB3O75112 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LDB3O75112 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.25□□□□□ -1.89
LDB3O75112 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LDB3O75112 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
LDB3O75112 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LDB3O75112 RNU5E-8P-201ENST00000363502 116 ntBASIC3.25□□□□□ -1.89
LDB3O75112 Y_RNA.184-201ENST00000363884 108 ntBASIC3.25□□□□□ -1.89
LDB3O75112 RNU6-173P-201ENST00000364215 104 ntBASIC3.25□□□□□ -1.89
LDB3O75112 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
LDB3O75112 SNORD17-201ENST00000390930 237 ntBASIC3.25□□□□□ -1.89
LDB3O75112 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LDB3O75112 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.25□□□□□ -1.89
LDB3O75112 SNORA11-201ENST00000408789 128 ntBASIC3.25□□□□□ -1.89
LDB3O75112 RNA5SP107-201ENST00000411358 122 ntBASIC3.25□□□□□ -1.89
LDB3O75112 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.25□□□□□ -1.89
LDB3O75112 BX323014.1-201ENST00000412876 237 ntBASIC3.25□□□□□ -1.89
LDB3O75112 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.25□□□□□ -1.89
LDB3O75112 UBE2FP1-201ENST00000416536 447 ntBASIC3.25□□□□□ -1.89
LDB3O75112 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.25□□□□□ -1.89
LDB3O75112 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.25□□□□□ -1.89
LDB3O75112 AL158071.1-201ENST00000430315 461 ntBASIC3.25□□□□□ -1.89
LDB3O75112 AC090774.1-201ENST00000435925 246 ntBASIC3.25□□□□□ -1.89
LDB3O75112 AL357552.1-201ENST00000445254 415 ntBASIC3.25□□□□□ -1.89
LDB3O75112 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.25□□□□□ -1.89
LDB3O75112 CBWD4P-201ENST00000445695 655 ntBASIC3.25□□□□□ -1.89
LDB3O75112 AC016696.1-201ENST00000446949 318 ntBASIC3.25□□□□□ -1.89
LDB3O75112 AC233279.1-201ENST00000455300 423 ntBASIC3.25□□□□□ -1.89
LDB3O75112 RPL23AP31-201ENST00000456160 467 ntBASIC3.25□□□□□ -1.89
LDB3O75112 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.25□□□□□ -1.89
LDB3O75112 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.25□□□□□ -1.89
LDB3O75112 RPL21P129-201ENST00000491732 478 ntBASIC3.25□□□□□ -1.89
LDB3O75112 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LDB3O75112 HSPD1P15-201ENST00000505573 1122 ntBASIC3.25□□□□□ -1.89
LDB3O75112 AC103851.1-201ENST00000506833 274 ntBASIC3.25□□□□□ -1.89
LDB3O75112 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.25□□□□□ -1.89
LDB3O75112 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.25□□□□□ -1.89
LDB3O75112 AC114797.1-201ENST00000514003 728 ntBASIC3.25□□□□□ -1.89
LDB3O75112 RNU2-10P-201ENST00000516375 211 ntBASIC3.25□□□□□ -1.89
LDB3O75112 RNU7-30P-201ENST00000516835 62 ntBASIC3.25□□□□□ -1.89
LDB3O75112 RNU6-64P-201ENST00000517119 105 ntBASIC3.25□□□□□ -1.89
LDB3O75112 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.25□□□□□ -1.89
LDB3O75112 SYF2P1-201ENST00000550658 413 ntBASIC3.25□□□□□ -1.89
LDB3O75112 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.25□□□□□ -1.89
LDB3O75112 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.25□□□□□ -1.89
LDB3O75112 AC098848.2-201ENST00000588023 330 ntBASIC3.25□□□□□ -1.89
LDB3O75112 AC067852.3-201ENST00000589177 561 ntBASIC3.25□□□□□ -1.89
LDB3O75112 GLUD1P4-201ENST00000590914 418 ntBASIC3.25□□□□□ -1.89
LDB3O75112 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.25□□□□□ -1.89
LDB3O75112 AL022099.1-201ENST00000604551 712 ntBASIC3.25□□□□□ -1.89
LDB3O75112 AC103710.2-201ENST00000609912 942 ntBASIC3.25□□□□□ -1.89
LDB3O75112 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.25□□□□□ -1.89
LDB3O75112 TUG1_2.1-201ENST00000614234 87 ntBASIC3.25□□□□□ -1.89
LDB3O75112 AC009248.2-201ENST00000619826 254 ntBASIC3.25□□□□□ -1.89
LDB3O75112 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LDB3O75112 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
LDB3O75112 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LDB3O75112 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.24□□□□□ -1.89
LDB3O75112 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LDB3O75112 AC066616.2-201ENST00000559334 1481 ntBASIC3.24□□□□□ -1.89
LDB3O75112 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LDB3O75112 TAB3P1-202ENST00000452645 1634 ntBASIC3.24□□□□□ -1.89
LDB3O75112 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.24□□□□□ -1.89
LDB3O75112 Y_RNA.67-201ENST00000362870 100 ntBASIC3.24□□□□□ -1.89
LDB3O75112 Y_RNA.138-201ENST00000363462 102 ntBASIC3.24□□□□□ -1.89
LDB3O75112 Y_RNA.157-201ENST00000363638 102 ntBASIC3.24□□□□□ -1.89
LDB3O75112 Y_RNA.367-201ENST00000365544 101 ntBASIC3.24□□□□□ -1.89
LDB3O75112 RNU4-20P-201ENST00000365601 151 ntBASIC3.24□□□□□ -1.89
LDB3O75112 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.24□□□□□ -1.89
LDB3O75112 SNORA32.2-201ENST00000384049 122 ntBASIC3.24□□□□□ -1.89
LDB3O75112 MIR490-201ENST00000384865 128 ntBASIC3.24□□□□□ -1.89
LDB3O75112 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
LDB3O75112 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LDB3O75112 RNA5SP118-201ENST00000410385 109 ntBASIC3.24□□□□□ -1.89
LDB3O75112 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.24□□□□□ -1.89
LDB3O75112 AC024082.2-201ENST00000434771 238 ntBASIC3.24□□□□□ -1.89
LDB3O75112 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.24□□□□□ -1.89
LDB3O75112 AC005094.1-201ENST00000440420 368 ntBASIC3.24□□□□□ -1.89
LDB3O75112 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
LDB3O75112 AL162389.1-201ENST00000449233 177 ntBASIC3.24□□□□□ -1.89
LDB3O75112 RBMY2UP-201ENST00000453474 324 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms