Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 MTND4P25-201ENST00000441039 533 ntBASIC3.03□□□□□ -1.92
SSX4O60224 NANOGNBP1-201ENST00000448444 480 ntBASIC3.03□□□□□ -1.92
SSX4O60224 AC132479.1-201ENST00000449160 144 ntBASIC3.03□□□□□ -1.92
SSX4O60224 AC146507.2-201ENST00000460608 476 ntBASIC3.03□□□□□ -1.92
SSX4O60224 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.03□□□□□ -1.92
SSX4O60224 HMGN2P13-201ENST00000476476 274 ntBASIC3.03□□□□□ -1.92
SSX4O60224 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.03□□□□□ -1.92
SSX4O60224 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.03□□□□□ -1.92
SSX4O60224 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.03□□□□□ -1.92
SSX4O60224 AC091133.4-201ENST00000511142 308 ntBASIC3.03□□□□□ -1.92
SSX4O60224 SCARNA13-201ENST00000516672 275 ntBASIC3.03□□□□□ -1.92
SSX4O60224 RNU6-410P-201ENST00000517006 107 ntBASIC3.03□□□□□ -1.92
SSX4O60224 RNA5SP290-201ENST00000517133 127 ntBASIC3.03□□□□□ -1.92
SSX4O60224 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.03□□□□□ -1.92
SSX4O60224 OR5B19P-201ENST00000531766 928 ntBASIC3.03□□□□□ -1.92
SSX4O60224 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.03□□□□□ -1.92
SSX4O60224 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.03□□□□□ -1.92
SSX4O60224 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.03□□□□□ -1.92
SSX4O60224 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.03□□□□□ -1.92
SSX4O60224 AMZ2P1-203ENST00000565833 850 ntBASIC3.03□□□□□ -1.92
SSX4O60224 HMGB1P6-201ENST00000569046 646 ntBASIC3.03□□□□□ -1.92
SSX4O60224 AC078795.2-201ENST00000602835 1252 ntBASIC3.03□□□□□ -1.92
SSX4O60224 AC136601.2-201ENST00000604356 474 ntBASIC3.03□□□□□ -1.92
SSX4O60224 AL161798.1-201ENST00000604630 131 ntBASIC3.03□□□□□ -1.92
SSX4O60224 AC006077.1-201ENST00000604746 343 ntBASIC3.03□□□□□ -1.92
SSX4O60224 AL138880.2-201ENST00000616214 239 ntBASIC3.03□□□□□ -1.92
SSX4O60224 U4.6-201ENST00000621618 127 ntBASIC3.03□□□□□ -1.92
SSX4O60224 AC138649.3-201ENST00000622154 254 ntBASIC3.03□□□□□ -1.92
SSX4O60224 MIR3651-201ENST00000630427 90 ntBASIC3.03□□□□□ -1.92
SSX4O60224 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.03□□□□□ -1.92
SSX4O60224 FAM35BP-202ENST00000497389 3337 ntBASIC3.03□□□□□ -1.92
SSX4O60224 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SSX4O60224 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.03□□□□□ -1.92
SSX4O60224 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.03□□□□□ -1.92
SSX4O60224 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SSX4O60224 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.02□□□□□ -1.93
SSX4O60224 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.02□□□□□ -1.93
SSX4O60224 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
SSX4O60224 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.02□□□□□ -1.93
SSX4O60224 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SSX4O60224 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.02□□□□□ -1.93
SSX4O60224 RNU6-270P-201ENST00000364131 105 ntBASIC3.02□□□□□ -1.93
SSX4O60224 RNU6-512P-201ENST00000364438 103 ntBASIC3.02□□□□□ -1.93
SSX4O60224 Y_RNA.245-201ENST00000364493 95 ntBASIC3.02□□□□□ -1.93
SSX4O60224 Y_RNA.296-201ENST00000364930 108 ntBASIC3.02□□□□□ -1.93
SSX4O60224 RNU6-108P-201ENST00000365558 107 ntBASIC3.02□□□□□ -1.93
SSX4O60224 RNU6-259P-201ENST00000383999 107 ntBASIC3.02□□□□□ -1.93
SSX4O60224 RNU6-456P-201ENST00000384493 107 ntBASIC3.02□□□□□ -1.93
SSX4O60224 RNU6-817P-201ENST00000391083 104 ntBASIC3.02□□□□□ -1.93
SSX4O60224 RNU1-101P-201ENST00000391171 127 ntBASIC3.02□□□□□ -1.93
SSX4O60224 SAR1AP2-201ENST00000392696 594 ntBASIC3.02□□□□□ -1.93
SSX4O60224 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.02□□□□□ -1.93
SSX4O60224 DBIP2-201ENST00000419076 262 ntBASIC3.02□□□□□ -1.93
SSX4O60224 SDCBPP3-201ENST00000419629 891 ntBASIC3.02□□□□□ -1.93
SSX4O60224 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.02□□□□□ -1.93
SSX4O60224 MTATP6P16-201ENST00000434543 526 ntBASIC3.02□□□□□ -1.93
SSX4O60224 RPS20P5-201ENST00000434808 360 ntBASIC3.02□□□□□ -1.93
SSX4O60224 AC079781.2-201ENST00000446424 169 ntBASIC3.02□□□□□ -1.93
SSX4O60224 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.02□□□□□ -1.93
SSX4O60224 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.02□□□□□ -1.93
SSX4O60224 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.02□□□□□ -1.93
SSX4O60224 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.02□□□□□ -1.93
SSX4O60224 RPL37P6-201ENST00000460682 294 ntBASIC3.02□□□□□ -1.93
SSX4O60224 AC091179.1-201ENST00000461606 579 ntBASIC3.02□□□□□ -1.93
SSX4O60224 RPL21P8-201ENST00000465083 535 ntBASIC3.02□□□□□ -1.93
SSX4O60224 AC006483.1-201ENST00000487308 313 ntBASIC3.02□□□□□ -1.93
SSX4O60224 AC117522.1-201ENST00000509821 380 ntBASIC3.02□□□□□ -1.93
SSX4O60224 SNORA31.1-201ENST00000515993 133 ntBASIC3.02□□□□□ -1.93
SSX4O60224 SNORA31.5-201ENST00000516190 133 ntBASIC3.02□□□□□ -1.93
SSX4O60224 RN7SKP57-201ENST00000517248 293 ntBASIC3.02□□□□□ -1.93
SSX4O60224 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SSX4O60224 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
SSX4O60224 HIGD1AP1-201ENST00000550979 275 ntBASIC3.02□□□□□ -1.93
SSX4O60224 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.02□□□□□ -1.93
SSX4O60224 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.02□□□□□ -1.93
SSX4O60224 Z84480.1-201ENST00000605131 311 ntBASIC3.02□□□□□ -1.93
SSX4O60224 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
SSX4O60224 MTND5P42-201ENST00000637720 498 ntBASIC3.02□□□□□ -1.93
SSX4O60224 AC008264.2-201ENST00000610193 3731 ntBASIC3.02□□□□□ -1.93
SSX4O60224 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.02□□□□□ -1.93
SSX4O60224 MTND5P26-201ENST00000426018 1752 ntBASIC3.02□□□□□ -1.93
SSX4O60224 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.02□□□□□ -1.93
SSX4O60224 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SSX4O60224 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
SSX4O60224 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SSX4O60224 RNU4-35P-201ENST00000362588 141 ntBASIC3.01□□□□□ -1.93
SSX4O60224 RNU6-1097P-201ENST00000363586 107 ntBASIC3.01□□□□□ -1.93
SSX4O60224 SNORA38.1-201ENST00000364172 131 ntBASIC3.01□□□□□ -1.93
SSX4O60224 RNU6-217P-201ENST00000384164 104 ntBASIC3.01□□□□□ -1.93
SSX4O60224 RNU6-1035P-201ENST00000384477 107 ntBASIC3.01□□□□□ -1.93
SSX4O60224 RNU6-140P-201ENST00000384566 108 ntBASIC3.01□□□□□ -1.93
SSX4O60224 MIR1-2-201ENST00000384961 85 ntBASIC3.01□□□□□ -1.93
SSX4O60224 RNA5SP252-201ENST00000391131 119 ntBASIC3.01□□□□□ -1.93
SSX4O60224 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.01□□□□□ -1.93
SSX4O60224 GSTA9P-201ENST00000406231 611 ntBASIC3.01□□□□□ -1.93
SSX4O60224 RNA5SP120-201ENST00000410900 112 ntBASIC3.01□□□□□ -1.93
SSX4O60224 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.01□□□□□ -1.93
SSX4O60224 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.01□□□□□ -1.93
SSX4O60224 ZNF863P-201ENST00000426746 417 ntBASIC3.01□□□□□ -1.93
SSX4O60224 RPL21P40-201ENST00000428586 483 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms