Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
ACTN4O43707 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ACTN4O43707 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.72□□□□□ -1.49
ACTN4O43707 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ACTN4O43707 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
ACTN4O43707 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
ACTN4O43707 Y_RNA.23-201ENST00000362496 106 ntBASIC5.72□□□□□ -1.49
ACTN4O43707 Y_RNA.71-201ENST00000362892 104 ntBASIC5.72□□□□□ -1.49
ACTN4O43707 RNU6-653P-201ENST00000363074 106 ntBASIC5.72□□□□□ -1.49
ACTN4O43707 Y_RNA.218-201ENST00000364218 104 ntBASIC5.72□□□□□ -1.49
ACTN4O43707 SNORD116-14-201ENST00000383894 92 ntBASIC5.72□□□□□ -1.49
ACTN4O43707 SNORD116-17-201ENST00000383929 92 ntBASIC5.72□□□□□ -1.49
ACTN4O43707 SNORD116-15-201ENST00000384445 92 ntBASIC5.72□□□□□ -1.49
ACTN4O43707 SNORD116-20-201ENST00000384529 92 ntBASIC5.72□□□□□ -1.49
ACTN4O43707 SNORD116-19-201ENST00000384729 92 ntBASIC5.72□□□□□ -1.49
ACTN4O43707 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
ACTN4O43707 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
ACTN4O43707 SNORA40.19-201ENST00000390846 128 ntBASIC5.72□□□□□ -1.49
ACTN4O43707 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.72□□□□□ -1.49
ACTN4O43707 TBCAP2-201ENST00000416175 326 ntBASIC5.72□□□□□ -1.49
ACTN4O43707 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC5.72□□□□□ -1.49
ACTN4O43707 SEPT7P4-201ENST00000437076 306 ntBASIC5.72□□□□□ -1.49
ACTN4O43707 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.72□□□□□ -1.49
ACTN4O43707 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.72□□□□□ -1.49
ACTN4O43707 AL137159.1-201ENST00000452808 512 ntBASIC5.72□□□□□ -1.49
ACTN4O43707 RN7SL441P-201ENST00000492388 296 ntBASIC5.72□□□□□ -1.49
ACTN4O43707 AC097462.2-201ENST00000504623 481 ntBASIC5.72□□□□□ -1.49
ACTN4O43707 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC5.72□□□□□ -1.49
ACTN4O43707 AC112693.2-201ENST00000556538 232 ntBASIC5.72□□□□□ -1.49
ACTN4O43707 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.72□□□□□ -1.49
ACTN4O43707 AC234771.5-201ENST00000600161 514 ntBASIC5.72□□□□□ -1.49
ACTN4O43707 SCARNA4-201ENST00000629045 128 ntBASIC5.72□□□□□ -1.49
ACTN4O43707 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC5.72□□□□□ -1.49
ACTN4O43707 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ACTN4O43707 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
ACTN4O43707 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
ACTN4O43707 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
ACTN4O43707 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
ACTN4O43707 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.49
ACTN4O43707 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.71□□□□□ -1.49
ACTN4O43707 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
ACTN4O43707 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.71□□□□□ -1.49
ACTN4O43707 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.71□□□□□ -1.5
ACTN4O43707 Y_RNA.217-201ENST00000364214 105 ntBASIC5.71□□□□□ -1.5
ACTN4O43707 RNU6-1175P-201ENST00000365200 107 ntBASIC5.71□□□□□ -1.5
ACTN4O43707 RNU6-20P-201ENST00000384106 107 ntBASIC5.71□□□□□ -1.5
ACTN4O43707 AL022722.2-201ENST00000402519 180 ntBASIC5.71□□□□□ -1.5
ACTN4O43707 RNU6-712P-201ENST00000410558 100 ntBASIC5.71□□□□□ -1.5
ACTN4O43707 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC5.71□□□□□ -1.5
ACTN4O43707 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.71□□□□□ -1.5
ACTN4O43707 AC008065.1-201ENST00000428525 348 ntBASIC5.71□□□□□ -1.5
ACTN4O43707 AC009237.7-201ENST00000447357 229 ntBASIC5.71□□□□□ -1.5
ACTN4O43707 IGHV5-78-201ENST00000450948 295 ntBASIC5.71□□□□□ -1.5
ACTN4O43707 Y_RNA.641-201ENST00000459414 105 ntBASIC5.71□□□□□ -1.5
ACTN4O43707 RPS17P2-201ENST00000461663 408 ntBASIC5.71□□□□□ -1.5
ACTN4O43707 RPS4XP1-201ENST00000482189 787 ntBASIC5.71□□□□□ -1.5
ACTN4O43707 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.71□□□□□ -1.5
ACTN4O43707 AC084851.1-201ENST00000529105 249 ntBASIC5.71□□□□□ -1.5
ACTN4O43707 AC024940.3-201ENST00000538551 316 ntBASIC5.71□□□□□ -1.5
ACTN4O43707 AL360181.4-201ENST00000621752 134 ntBASIC5.71□□□□□ -1.5
ACTN4O43707 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.71□□□□□ -1.5
ACTN4O43707 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.71□□□□□ -1.5
ACTN4O43707 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ACTN4O43707 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
ACTN4O43707 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
ACTN4O43707 AL391516.1-201ENST00000554380 2449 ntBASIC5.7□□□□□ -1.5
ACTN4O43707 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.7□□□□□ -1.5
ACTN4O43707 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ACTN4O43707 Y_RNA.7-201ENST00000362352 102 ntBASIC5.7□□□□□ -1.5
ACTN4O43707 RNA5SP361-201ENST00000362686 118 ntBASIC5.7□□□□□ -1.5
ACTN4O43707 Y_RNA.331-201ENST00000365267 102 ntBASIC5.7□□□□□ -1.5
ACTN4O43707 MIR600-201ENST00000385007 98 ntBASIC5.7□□□□□ -1.5
ACTN4O43707 MIR10A-201ENST00000385043 110 ntBASIC5.7□□□□□ -1.5
ACTN4O43707 MIR143-201ENST00000385300 106 ntBASIC5.7□□□□□ -1.5
ACTN4O43707 RNU6-882P-201ENST00000391025 103 ntBASIC5.7□□□□□ -1.5
ACTN4O43707 OR3A2-201ENST00000408891 1076 ntBASIC5.7□□□□□ -1.5
ACTN4O43707 AL513331.1-201ENST00000411908 397 ntBASIC5.7□□□□□ -1.5
ACTN4O43707 CTSL3P-202ENST00000412179 788 ntBASIC5.7□□□□□ -1.5
ACTN4O43707 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.7□□□□□ -1.5
ACTN4O43707 RPS27AP12-201ENST00000429552 465 ntBASIC5.7□□□□□ -1.5
ACTN4O43707 AC011742.1-201ENST00000431448 434 ntBASIC5.7□□□□□ -1.5
ACTN4O43707 RPS5P7-201ENST00000456664 608 ntBASIC5.7□□□□□ -1.5
ACTN4O43707 RPS27AP9-201ENST00000477681 438 ntBASIC5.7□□□□□ -1.5
ACTN4O43707 RPL26P26-201ENST00000480251 434 ntBASIC5.7□□□□□ -1.5
ACTN4O43707 AC007686.1-201ENST00000488511 463 ntBASIC5.7□□□□□ -1.5
ACTN4O43707 AC073073.1-201ENST00000493920 463 ntBASIC5.7□□□□□ -1.5
ACTN4O43707 AL136038.1-201ENST00000497246 351 ntBASIC5.7□□□□□ -1.5
ACTN4O43707 RNU6-513P-201ENST00000516104 104 ntBASIC5.7□□□□□ -1.5
ACTN4O43707 RNU6-567P-201ENST00000516746 107 ntBASIC5.7□□□□□ -1.5
ACTN4O43707 IGKV3D-34-201ENST00000522638 302 ntBASIC5.7□□□□□ -1.5
ACTN4O43707 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.7□□□□□ -1.5
ACTN4O43707 NDUFB4P11-201ENST00000560510 395 ntBASIC5.7□□□□□ -1.5
ACTN4O43707 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC5.7□□□□□ -1.5
ACTN4O43707 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC5.7□□□□□ -1.5
ACTN4O43707 BPIFA4P-203ENST00000603168 689 ntBASIC5.7□□□□□ -1.5
ACTN4O43707 IMMP1LP3-201ENST00000604197 224 ntBASIC5.7□□□□□ -1.5
ACTN4O43707 AL355480.1-201ENST00000629041 99 ntBASIC5.7□□□□□ -1.5
ACTN4O43707 Clostridiales-1.2-201ENST00000636724 160 ntBASIC5.7□□□□□ -1.5
ACTN4O43707 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
ACTN4O43707 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms