Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.64□□□□□ -1.67
SRGAP3O43295 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.64□□□□□ -1.67
SRGAP3O43295 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.64□□□□□ -1.67
SRGAP3O43295 AC023043.2-201ENST00000589678 1026 ntBASIC4.64□□□□□ -1.67
SRGAP3O43295 AC010680.4-201ENST00000605334 543 ntBASIC4.64□□□□□ -1.67
SRGAP3O43295 AC012443.1-201ENST00000605605 231 ntBASIC4.64□□□□□ -1.67
SRGAP3O43295 BRDTP1-201ENST00000605735 677 ntBASIC4.64□□□□□ -1.67
SRGAP3O43295 AL669831.3-213ENST00000636676 183 ntBASIC4.64□□□□□ -1.67
SRGAP3O43295 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SRGAP3O43295 AC090337.1-201ENST00000579651 2074 ntBASIC4.64□□□□□ -1.67
SRGAP3O43295 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.64□□□□□ -1.67
SRGAP3O43295 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.64□□□□□ -1.67
SRGAP3O43295 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.64□□□□□ -1.67
SRGAP3O43295 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SRGAP3O43295 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SRGAP3O43295 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SRGAP3O43295 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SRGAP3O43295 AL445437.1-201ENST00000623157 3087 ntBASIC4.63□□□□□ -1.67
SRGAP3O43295 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SRGAP3O43295 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.63□□□□□ -1.67
SRGAP3O43295 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SRGAP3O43295 RNU6-550P-201ENST00000391057 101 ntBASIC4.63□□□□□ -1.67
SRGAP3O43295 AL139397.2-201ENST00000404529 772 ntBASIC4.63□□□□□ -1.67
SRGAP3O43295 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.63□□□□□ -1.67
SRGAP3O43295 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.63□□□□□ -1.67
SRGAP3O43295 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.63□□□□□ -1.67
SRGAP3O43295 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.63□□□□□ -1.67
SRGAP3O43295 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.63□□□□□ -1.67
SRGAP3O43295 AC005094.1-201ENST00000440420 368 ntBASIC4.63□□□□□ -1.67
SRGAP3O43295 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.63□□□□□ -1.67
SRGAP3O43295 MTND1P17-201ENST00000448961 204 ntBASIC4.63□□□□□ -1.67
SRGAP3O43295 RPL21P8-201ENST00000465083 535 ntBASIC4.63□□□□□ -1.67
SRGAP3O43295 RPL23AP55-201ENST00000498163 452 ntBASIC4.63□□□□□ -1.67
SRGAP3O43295 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.63□□□□□ -1.67
SRGAP3O43295 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.63□□□□□ -1.67
SRGAP3O43295 RNU6-1092P-201ENST00000516955 87 ntBASIC4.63□□□□□ -1.67
SRGAP3O43295 AC008011.1-201ENST00000545989 227 ntBASIC4.63□□□□□ -1.67
SRGAP3O43295 OR11H5P-201ENST00000554039 926 ntBASIC4.63□□□□□ -1.67
SRGAP3O43295 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.63□□□□□ -1.67
SRGAP3O43295 AC106782.4-201ENST00000568264 210 ntBASIC4.63□□□□□ -1.67
SRGAP3O43295 MIR4293-201ENST00000584305 78 ntBASIC4.63□□□□□ -1.67
SRGAP3O43295 AC025946.2-201ENST00000603398 234 ntBASIC4.63□□□□□ -1.67
SRGAP3O43295 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.63□□□□□ -1.67
SRGAP3O43295 AC022418.1-201ENST00000624118 445 ntBASIC4.63□□□□□ -1.67
SRGAP3O43295 AC091925.2-201ENST00000625059 256 ntBASIC4.63□□□□□ -1.67
SRGAP3O43295 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.63□□□□□ -1.67
SRGAP3O43295 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.63□□□□□ -1.67
SRGAP3O43295 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.63□□□□□ -1.67
SRGAP3O43295 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.63□□□□□ -1.67
SRGAP3O43295 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.62□□□□□ -1.67
SRGAP3O43295 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SRGAP3O43295 FAM35DP-201ENST00000323387 2712 ntBASIC4.62□□□□□ -1.67
SRGAP3O43295 ZNF33CP-201ENST00000432492 2030 ntBASIC4.62□□□□□ -1.67
SRGAP3O43295 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.62□□□□□ -1.67
SRGAP3O43295 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SRGAP3O43295 SNORD116-11-201ENST00000383882 92 ntBASIC4.62□□□□□ -1.67
SRGAP3O43295 RNU6-1040P-201ENST00000383974 107 ntBASIC4.62□□□□□ -1.67
SRGAP3O43295 RNU6-985P-201ENST00000410182 104 ntBASIC4.62□□□□□ -1.67
SRGAP3O43295 Y_RNA.646-201ENST00000410980 101 ntBASIC4.62□□□□□ -1.67
SRGAP3O43295 RNU6-603P-201ENST00000411403 107 ntBASIC4.62□□□□□ -1.67
SRGAP3O43295 RAB9AP3-201ENST00000412737 573 ntBASIC4.62□□□□□ -1.67
SRGAP3O43295 MCFD2P1-201ENST00000417812 300 ntBASIC4.62□□□□□ -1.67
SRGAP3O43295 NUP35P1-201ENST00000422734 947 ntBASIC4.62□□□□□ -1.67
SRGAP3O43295 RAB9AP1-201ENST00000449393 573 ntBASIC4.62□□□□□ -1.67
SRGAP3O43295 SCARNA18-201ENST00000459004 134 ntBASIC4.62□□□□□ -1.67
SRGAP3O43295 SNORD97-201ENST00000459187 142 ntBASIC4.62□□□□□ -1.67
SRGAP3O43295 RPL21P93-201ENST00000480465 489 ntBASIC4.62□□□□□ -1.67
SRGAP3O43295 AC135721.1-201ENST00000497954 479 ntBASIC4.62□□□□□ -1.67
SRGAP3O43295 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC4.62□□□□□ -1.67
SRGAP3O43295 HIGD1AP13-201ENST00000509878 289 ntBASIC4.62□□□□□ -1.67
SRGAP3O43295 TBCAP3-201ENST00000512475 312 ntBASIC4.62□□□□□ -1.67
SRGAP3O43295 MTCO2P24-201ENST00000515611 426 ntBASIC4.62□□□□□ -1.67
SRGAP3O43295 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.62□□□□□ -1.67
SRGAP3O43295 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.62□□□□□ -1.67
SRGAP3O43295 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC4.62□□□□□ -1.67
SRGAP3O43295 AC010653.1-201ENST00000571108 881 ntBASIC4.62□□□□□ -1.67
SRGAP3O43295 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.62□□□□□ -1.67
SRGAP3O43295 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.62□□□□□ -1.67
SRGAP3O43295 ATP1B3P1-201ENST00000605365 821 ntBASIC4.62□□□□□ -1.67
SRGAP3O43295 AC011373.1-201ENST00000607270 237 ntBASIC4.62□□□□□ -1.67
SRGAP3O43295 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.62□□□□□ -1.67
SRGAP3O43295 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.62□□□□□ -1.67
SRGAP3O43295 AL355365.1-201ENST00000616480 294 ntBASIC4.62□□□□□ -1.67
SRGAP3O43295 CR392039.5-201ENST00000623201 510 ntBASIC4.62□□□□□ -1.67
SRGAP3O43295 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
SRGAP3O43295 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.62□□□□□ -1.67
SRGAP3O43295 AC010329.2-201ENST00000595195 2737 ntBASIC4.62□□□□□ -1.67
SRGAP3O43295 GABPAP-201ENST00000419271 1356 ntBASIC4.62□□□□□ -1.67
SRGAP3O43295 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SRGAP3O43295 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.61□□□□□ -1.67
SRGAP3O43295 ZNF285B-201ENST00000561698 1767 ntBASIC4.61□□□□□ -1.67
SRGAP3O43295 RNU6-1115P-201ENST00000362490 106 ntBASIC4.61□□□□□ -1.67
SRGAP3O43295 Y_RNA.149-201ENST00000363558 117 ntBASIC4.61□□□□□ -1.67
SRGAP3O43295 Y_RNA.158-201ENST00000363651 101 ntBASIC4.61□□□□□ -1.67
SRGAP3O43295 MRPL42P3-201ENST00000401492 326 ntBASIC4.61□□□□□ -1.67
SRGAP3O43295 MIR548F4-201ENST00000408515 105 ntBASIC4.61□□□□□ -1.67
SRGAP3O43295 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.61□□□□□ -1.67
SRGAP3O43295 AC008526.1-201ENST00000509149 338 ntBASIC4.61□□□□□ -1.67
SRGAP3O43295 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.61□□□□□ -1.67
SRGAP3O43295 Y_RNA.661-201ENST00000516003 99 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms