Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 SCARNA24.1-201ENST00000516465 137 ntBASIC3.06□□□□□ -1.92
TO15178 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.06□□□□□ -1.92
TO15178 RNU6-445P-201ENST00000516949 107 ntBASIC3.06□□□□□ -1.92
TO15178 RNU6-410P-201ENST00000517006 107 ntBASIC3.06□□□□□ -1.92
TO15178 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.06□□□□□ -1.92
TO15178 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.06□□□□□ -1.92
TO15178 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.06□□□□□ -1.92
TO15178 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.06□□□□□ -1.92
TO15178 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
TO15178 AC010546.1-201ENST00000569391 485 ntBASIC3.06□□□□□ -1.92
TO15178 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.06□□□□□ -1.92
TO15178 AC098848.2-201ENST00000588023 330 ntBASIC3.06□□□□□ -1.92
TO15178 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.06□□□□□ -1.92
TO15178 AL136363.2-201ENST00000604173 851 ntBASIC3.06□□□□□ -1.92
TO15178 uc_338.1-201ENST00000612113 180 ntBASIC3.06□□□□□ -1.92
TO15178 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.06□□□□□ -1.92
TO15178 OR5H6-203ENST00000642105 978 ntBASIC3.06□□□□□ -1.92
TO15178 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TO15178 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TO15178 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TO15178 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TO15178 RNU6-188P-201ENST00000364207 107 ntBASIC3.05□□□□□ -1.92
TO15178 RNA5SP72-201ENST00000364442 117 ntBASIC3.05□□□□□ -1.92
TO15178 RNU6-282P-201ENST00000365357 103 ntBASIC3.05□□□□□ -1.92
TO15178 SMIM11P1-201ENST00000369586 178 ntBASIC3.05□□□□□ -1.92
TO15178 AP002088.1-201ENST00000382740 395 ntBASIC3.05□□□□□ -1.92
TO15178 MIR325-201ENST00000385260 98 ntBASIC3.05□□□□□ -1.92
TO15178 RNU6-817P-201ENST00000391083 104 ntBASIC3.05□□□□□ -1.92
TO15178 MIR1289-1-201ENST00000408836 144 ntBASIC3.05□□□□□ -1.92
TO15178 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TO15178 RNA5SP31-201ENST00000411144 127 ntBASIC3.05□□□□□ -1.92
TO15178 BX323014.1-201ENST00000412876 237 ntBASIC3.05□□□□□ -1.92
TO15178 BTF3L4P3-201ENST00000418879 476 ntBASIC3.05□□□□□ -1.92
TO15178 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.05□□□□□ -1.92
TO15178 BX679664.1-201ENST00000434429 253 ntBASIC3.05□□□□□ -1.92
TO15178 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.05□□□□□ -1.92
TO15178 PIGFP3-201ENST00000441918 722 ntBASIC3.05□□□□□ -1.92
TO15178 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.05□□□□□ -1.92
TO15178 AC132479.1-201ENST00000449160 144 ntBASIC3.05□□□□□ -1.92
TO15178 AC092798.1-201ENST00000458542 409 ntBASIC3.05□□□□□ -1.92
TO15178 RNU6-420P-201ENST00000458780 107 ntBASIC3.05□□□□□ -1.92
TO15178 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.05□□□□□ -1.92
TO15178 KC877373.1-201ENST00000479066 408 ntBASIC3.05□□□□□ -1.92
TO15178 AC007182.2-201ENST00000489251 402 ntBASIC3.05□□□□□ -1.92
TO15178 AC117522.1-201ENST00000509821 380 ntBASIC3.05□□□□□ -1.92
TO15178 AC091133.4-201ENST00000511142 308 ntBASIC3.05□□□□□ -1.92
TO15178 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.05□□□□□ -1.92
TO15178 RNA5SP385-201ENST00000515947 110 ntBASIC3.05□□□□□ -1.92
TO15178 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.05□□□□□ -1.92
TO15178 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.05□□□□□ -1.92
TO15178 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.05□□□□□ -1.92
TO15178 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.05□□□□□ -1.92
TO15178 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.05□□□□□ -1.92
TO15178 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.05□□□□□ -1.92
TO15178 AC007363.1-201ENST00000604736 620 ntBASIC3.05□□□□□ -1.92
TO15178 AC007619.2-201ENST00000605743 379 ntBASIC3.05□□□□□ -1.92
TO15178 AL365204.3-201ENST00000612448 685 ntBASIC3.05□□□□□ -1.92
TO15178 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.05□□□□□ -1.92
TO15178 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.05□□□□□ -1.92
TO15178 AC138649.3-201ENST00000622154 254 ntBASIC3.05□□□□□ -1.92
TO15178 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.05□□□□□ -1.92
TO15178 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.05□□□□□ -1.92
TO15178 AC022336.2-201ENST00000568966 2538 ntBASIC3.05□□□□□ -1.92
TO15178 MTND5P26-201ENST00000426018 1752 ntBASIC3.05□□□□□ -1.92
TO15178 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
TO15178 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.04□□□□□ -1.92
TO15178 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.04□□□□□ -1.92
TO15178 RNA5SP267-201ENST00000364893 126 ntBASIC3.04□□□□□ -1.92
TO15178 RNU6-946P-201ENST00000383878 107 ntBASIC3.04□□□□□ -1.92
TO15178 RNU6-641P-201ENST00000384006 107 ntBASIC3.04□□□□□ -1.92
TO15178 RNU6-456P-201ENST00000384493 107 ntBASIC3.04□□□□□ -1.92
TO15178 RNA5SP229-201ENST00000410809 99 ntBASIC3.04□□□□□ -1.92
TO15178 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.04□□□□□ -1.92
TO15178 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.04□□□□□ -1.92
TO15178 SDCBPP3-201ENST00000419629 891 ntBASIC3.04□□□□□ -1.92
TO15178 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.04□□□□□ -1.92
TO15178 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.04□□□□□ -1.92
TO15178 AC092047.1-201ENST00000424997 240 ntBASIC3.04□□□□□ -1.92
TO15178 AC104651.1-201ENST00000427559 735 ntBASIC3.04□□□□□ -1.92
TO15178 AC093106.2-201ENST00000428212 385 ntBASIC3.04□□□□□ -1.92
TO15178 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.04□□□□□ -1.92
TO15178 RPS20P5-201ENST00000434808 360 ntBASIC3.04□□□□□ -1.92
TO15178 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.04□□□□□ -1.92
TO15178 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.04□□□□□ -1.92
TO15178 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.04□□□□□ -1.92
TO15178 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.04□□□□□ -1.92
TO15178 AC022364.2-201ENST00000457963 554 ntBASIC3.04□□□□□ -1.92
TO15178 AC091153.1-201ENST00000466297 402 ntBASIC3.04□□□□□ -1.92
TO15178 RN7SL283P-201ENST00000489055 303 ntBASIC3.04□□□□□ -1.92
TO15178 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.04□□□□□ -1.92
TO15178 AC110794.1-201ENST00000505816 425 ntBASIC3.04□□□□□ -1.92
TO15178 AC026427.2-201ENST00000506228 536 ntBASIC3.04□□□□□ -1.92
TO15178 MTND2P33-201ENST00000506452 1031 ntBASIC3.04□□□□□ -1.92
TO15178 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.04□□□□□ -1.92
TO15178 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.04□□□□□ -1.92
TO15178 RAC1P5-201ENST00000512182 576 ntBASIC3.04□□□□□ -1.92
TO15178 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.04□□□□□ -1.92
TO15178 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.04□□□□□ -1.92
TO15178 AC245505.1-201ENST00000556398 224 ntBASIC3.04□□□□□ -1.92
TO15178 HMGB1P14-201ENST00000557424 591 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms