Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 HIGD1AP17-201ENST00000554576 276 ntBASIC3.16□□□□□ -1.9
CUX2O14529 DUXAP3-201ENST00000603616 594 ntBASIC3.16□□□□□ -1.9
CUX2O14529 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.16□□□□□ -1.9
CUX2O14529 OR4G11P-202ENST00000642116 1414 ntBASIC3.15□□□□□ -1.91
CUX2O14529 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CUX2O14529 AL136310.1-201ENST00000404926 654 ntBASIC3.15□□□□□ -1.91
CUX2O14529 AL096701.2-201ENST00000416920 238 ntBASIC3.15□□□□□ -1.91
CUX2O14529 TIMM9P2-201ENST00000419324 266 ntBASIC3.15□□□□□ -1.91
CUX2O14529 RPL21P32-201ENST00000419877 477 ntBASIC3.15□□□□□ -1.91
CUX2O14529 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.15□□□□□ -1.91
CUX2O14529 MTND2P20-201ENST00000440805 661 ntBASIC3.15□□□□□ -1.91
CUX2O14529 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.15□□□□□ -1.91
CUX2O14529 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
CUX2O14529 MTCO2P25-201ENST00000447065 681 ntBASIC3.15□□□□□ -1.91
CUX2O14529 AL353691.1-201ENST00000451332 387 ntBASIC3.15□□□□□ -1.91
CUX2O14529 Z82190.1-201ENST00000454534 490 ntBASIC3.15□□□□□ -1.91
CUX2O14529 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CUX2O14529 MTCYBP17-201ENST00000503579 789 ntBASIC3.15□□□□□ -1.91
CUX2O14529 AC114981.1-201ENST00000503897 678 ntBASIC3.15□□□□□ -1.91
CUX2O14529 AC114322.1-201ENST00000506771 926 ntBASIC3.15□□□□□ -1.91
CUX2O14529 AC098799.2-201ENST00000509466 868 ntBASIC3.15□□□□□ -1.91
CUX2O14529 RNU6-1223P-201ENST00000517124 104 ntBASIC3.15□□□□□ -1.91
CUX2O14529 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.15□□□□□ -1.91
CUX2O14529 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.15□□□□□ -1.91
CUX2O14529 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.15□□□□□ -1.91
CUX2O14529 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.15□□□□□ -1.91
CUX2O14529 DUXAP11-201ENST00000603858 526 ntBASIC3.15□□□□□ -1.91
CUX2O14529 AC009220.3-201ENST00000604318 586 ntBASIC3.15□□□□□ -1.91
CUX2O14529 AC068831.7-201ENST00000616954 363 ntBASIC3.15□□□□□ -1.91
CUX2O14529 AC002546.1-201ENST00000588041 2504 ntBASIC3.14□□□□□ -1.91
CUX2O14529 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CUX2O14529 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.14□□□□□ -1.91
CUX2O14529 Y_RNA.472-201ENST00000384322 102 ntBASIC3.14□□□□□ -1.91
CUX2O14529 NANOGP2-201ENST00000435391 727 ntBASIC3.14□□□□□ -1.91
CUX2O14529 OR6K5P-201ENST00000447050 945 ntBASIC3.14□□□□□ -1.91
CUX2O14529 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.14□□□□□ -1.91
CUX2O14529 TMEM251P1-201ENST00000503717 318 ntBASIC3.14□□□□□ -1.91
CUX2O14529 CBX3P3-201ENST00000508108 532 ntBASIC3.14□□□□□ -1.91
CUX2O14529 AC107393.1-201ENST00000512403 346 ntBASIC3.14□□□□□ -1.91
CUX2O14529 COX6CP5-201ENST00000527162 228 ntBASIC3.14□□□□□ -1.91
CUX2O14529 PRELID2P1-201ENST00000552837 301 ntBASIC3.14□□□□□ -1.91
CUX2O14529 AL137100.2-201ENST00000555786 315 ntBASIC3.14□□□□□ -1.91
CUX2O14529 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC3.14□□□□□ -1.91
CUX2O14529 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.14□□□□□ -1.91
CUX2O14529 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.14□□□□□ -1.91
CUX2O14529 VN1R83P-201ENST00000595685 445 ntBASIC3.14□□□□□ -1.91
CUX2O14529 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CUX2O14529 AP002826.1-201ENST00000608835 315 ntBASIC3.14□□□□□ -1.91
CUX2O14529 AC022306.3-201ENST00000619930 550 ntBASIC3.14□□□□□ -1.91
CUX2O14529 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CUX2O14529 AL079343.1-201ENST00000572358 1771 ntBASIC3.14□□□□□ -1.91
CUX2O14529 MIR96-201ENST00000362288 78 ntBASIC3.13□□□□□ -1.91
CUX2O14529 Z98749.2-208ENST00000381646 500 ntBASIC3.13□□□□□ -1.91
CUX2O14529 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CUX2O14529 RNU6-413P-201ENST00000384115 107 ntBASIC3.13□□□□□ -1.91
CUX2O14529 AL136372.1-201ENST00000403060 228 ntBASIC3.13□□□□□ -1.91
CUX2O14529 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.13□□□□□ -1.91
CUX2O14529 AC007742.1-201ENST00000425789 329 ntBASIC3.13□□□□□ -1.91
CUX2O14529 ELOCP26-201ENST00000436067 329 ntBASIC3.13□□□□□ -1.91
CUX2O14529 HMGN2P20-201ENST00000437531 273 ntBASIC3.13□□□□□ -1.91
CUX2O14529 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.13□□□□□ -1.91
CUX2O14529 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.13□□□□□ -1.91
CUX2O14529 EXOSC3P1-201ENST00000448649 500 ntBASIC3.13□□□□□ -1.91
CUX2O14529 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.13□□□□□ -1.91
CUX2O14529 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.13□□□□□ -1.91
CUX2O14529 AC008837.2-201ENST00000513076 418 ntBASIC3.13□□□□□ -1.91
CUX2O14529 OR10V3P-201ENST00000525712 725 ntBASIC3.13□□□□□ -1.91
CUX2O14529 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CUX2O14529 SLC2A13P1-201ENST00000531560 322 ntBASIC3.13□□□□□ -1.91
CUX2O14529 AL163153.1-201ENST00000554223 283 ntBASIC3.13□□□□□ -1.91
CUX2O14529 AC008015.1-201ENST00000555505 465 ntBASIC3.13□□□□□ -1.91
CUX2O14529 MED28P6-201ENST00000558776 231 ntBASIC3.13□□□□□ -1.91
CUX2O14529 MIR4474-201ENST00000579189 78 ntBASIC3.13□□□□□ -1.91
CUX2O14529 COX6CP3-201ENST00000580869 223 ntBASIC3.13□□□□□ -1.91
CUX2O14529 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.13□□□□□ -1.91
CUX2O14529 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.13□□□□□ -1.91
CUX2O14529 AL109653.1-201ENST00000603091 248 ntBASIC3.13□□□□□ -1.91
CUX2O14529 AC023158.2-201ENST00000614876 543 ntBASIC3.13□□□□□ -1.91
CUX2O14529 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.13□□□□□ -1.91
CUX2O14529 AL136164.4-201ENST00000625013 2135 ntBASIC3.13□□□□□ -1.91
CUX2O14529 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CUX2O14529 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CUX2O14529 RPS15AP38-201ENST00000413110 372 ntBASIC3.12□□□□□ -1.91
CUX2O14529 EZH2P1-201ENST00000431167 291 ntBASIC3.12□□□□□ -1.91
CUX2O14529 AL591704.1-201ENST00000432574 275 ntBASIC3.12□□□□□ -1.91
CUX2O14529 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CUX2O14529 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.12□□□□□ -1.91
CUX2O14529 AC011979.1-201ENST00000472300 483 ntBASIC3.12□□□□□ -1.91
CUX2O14529 AC006483.1-201ENST00000487308 313 ntBASIC3.12□□□□□ -1.91
CUX2O14529 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.12□□□□□ -1.91
CUX2O14529 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.12□□□□□ -1.91
CUX2O14529 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.12□□□□□ -1.91
CUX2O14529 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.12□□□□□ -1.91
CUX2O14529 AC022690.1-201ENST00000526681 550 ntBASIC3.12□□□□□ -1.91
CUX2O14529 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CUX2O14529 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CUX2O14529 OR4K8P-201ENST00000578842 1048 ntBASIC3.12□□□□□ -1.91
CUX2O14529 AL390240.1-201ENST00000612950 384 ntBASIC3.12□□□□□ -1.91
CUX2O14529 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC3.12□□□□□ -1.91
CUX2O14529 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms