Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.44□□□□□ -2.18
SDCBPO00560 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.44□□□□□ -2.18
SDCBPO00560 AC079148.1-201ENST00000565944 819 ntBASIC1.44□□□□□ -2.18
SDCBPO00560 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.44□□□□□ -2.18
SDCBPO00560 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.44□□□□□ -2.18
SDCBPO00560 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.44□□□□□ -2.18
SDCBPO00560 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.44□□□□□ -2.18
SDCBPO00560 AC098483.2-201ENST00000603158 454 ntBASIC1.44□□□□□ -2.18
SDCBPO00560 AP000403.1-201ENST00000603349 851 ntBASIC1.44□□□□□ -2.18
SDCBPO00560 AL390208.1-201ENST00000605885 644 ntBASIC1.44□□□□□ -2.18
SDCBPO00560 AL158211.4-201ENST00000606988 584 ntBASIC1.44□□□□□ -2.18
SDCBPO00560 AC013412.1-201ENST00000610687 192 ntBASIC1.44□□□□□ -2.18
SDCBPO00560 AC009318.2-201ENST00000610917 651 ntBASIC1.44□□□□□ -2.18
SDCBPO00560 AL118508.4-201ENST00000624142 1176 ntBASIC1.44□□□□□ -2.18
SDCBPO00560 MTND1P37-201ENST00000636562 264 ntBASIC1.44□□□□□ -2.18
SDCBPO00560 MIR1322-201ENST00000638013 71 ntBASIC1.44□□□□□ -2.18
SDCBPO00560 MKKS-204ENST00000639674 192 ntBASIC1.44□□□□□ -2.18
SDCBPO00560 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
SDCBPO00560 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
SDCBPO00560 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SDCBPO00560 HSPA8P4-201ENST00000511877 1920 ntBASIC1.43□□□□□ -2.18
SDCBPO00560 RNU6-707P-201ENST00000364647 95 ntBASIC1.43□□□□□ -2.18
SDCBPO00560 RNU1-148P-201ENST00000384472 162 ntBASIC1.43□□□□□ -2.18
SDCBPO00560 MIR1294-201ENST00000408503 142 ntBASIC1.43□□□□□ -2.18
SDCBPO00560 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.43□□□□□ -2.18
SDCBPO00560 AL139421.1-201ENST00000423010 169 ntBASIC1.43□□□□□ -2.18
SDCBPO00560 ZNF863P-201ENST00000426746 417 ntBASIC1.43□□□□□ -2.18
SDCBPO00560 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.43□□□□□ -2.18
SDCBPO00560 AC004383.1-201ENST00000438135 289 ntBASIC1.43□□□□□ -2.18
SDCBPO00560 AC092427.1-201ENST00000439177 601 ntBASIC1.43□□□□□ -2.18
SDCBPO00560 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.43□□□□□ -2.18
SDCBPO00560 AL353718.1-201ENST00000451028 517 ntBASIC1.43□□□□□ -2.18
SDCBPO00560 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.43□□□□□ -2.18
SDCBPO00560 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.43□□□□□ -2.18
SDCBPO00560 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.43□□□□□ -2.18
SDCBPO00560 AC079203.1-201ENST00000487972 404 ntBASIC1.43□□□□□ -2.18
SDCBPO00560 AC104564.1-201ENST00000493028 407 ntBASIC1.43□□□□□ -2.18
SDCBPO00560 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC1.43□□□□□ -2.18
SDCBPO00560 NRON-201ENST00000517270 370 ntBASIC1.43□□□□□ -2.18
SDCBPO00560 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.43□□□□□ -2.18
SDCBPO00560 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.43□□□□□ -2.18
SDCBPO00560 MIR4637-201ENST00000582405 84 ntBASIC1.43□□□□□ -2.18
SDCBPO00560 AC010928.2-201ENST00000588017 287 ntBASIC1.43□□□□□ -2.18
SDCBPO00560 AP001542.2-201ENST00000593141 364 ntBASIC1.43□□□□□ -2.18
SDCBPO00560 AL161729.4-201ENST00000604650 476 ntBASIC1.43□□□□□ -2.18
SDCBPO00560 AL021997.1-201ENST00000605757 193 ntBASIC1.43□□□□□ -2.18
SDCBPO00560 AC084768.2-201ENST00000622736 221 ntBASIC1.43□□□□□ -2.18
SDCBPO00560 AC116618.1-201ENST00000634617 774 ntBASIC1.43□□□□□ -2.18
SDCBPO00560 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
SDCBPO00560 AP006437.1-201ENST00000641440 3685 ntBASIC1.43□□□□□ -2.18
SDCBPO00560 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.42□□□□□ -2.18
SDCBPO00560 RNU5B-1-201ENST00000363286 116 ntBASIC1.42□□□□□ -2.18
SDCBPO00560 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.42□□□□□ -2.18
SDCBPO00560 RNU6-207P-201ENST00000384137 107 ntBASIC1.42□□□□□ -2.18
SDCBPO00560 SNORD65.1-201ENST00000390889 71 ntBASIC1.42□□□□□ -2.18
SDCBPO00560 RNU2-33P-201ENST00000410344 192 ntBASIC1.42□□□□□ -2.18
SDCBPO00560 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.42□□□□□ -2.18
SDCBPO00560 RPL31P63-201ENST00000422565 375 ntBASIC1.42□□□□□ -2.18
SDCBPO00560 AC093106.2-201ENST00000428212 385 ntBASIC1.42□□□□□ -2.18
SDCBPO00560 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.42□□□□□ -2.18
SDCBPO00560 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC1.42□□□□□ -2.18
SDCBPO00560 AC124916.1-201ENST00000444020 547 ntBASIC1.42□□□□□ -2.18
SDCBPO00560 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.42□□□□□ -2.18
SDCBPO00560 AL096829.2-201ENST00000446582 742 ntBASIC1.42□□□□□ -2.18
SDCBPO00560 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.42□□□□□ -2.18
SDCBPO00560 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.42□□□□□ -2.18
SDCBPO00560 UBL5P3-201ENST00000475112 231 ntBASIC1.42□□□□□ -2.18
SDCBPO00560 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.42□□□□□ -2.18
SDCBPO00560 RNU1-41P-201ENST00000516161 162 ntBASIC1.42□□□□□ -2.18
SDCBPO00560 RNU1-48P-201ENST00000516400 162 ntBASIC1.42□□□□□ -2.18
SDCBPO00560 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.42□□□□□ -2.18
SDCBPO00560 HSPA8P13-201ENST00000523715 472 ntBASIC1.42□□□□□ -2.18
SDCBPO00560 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.42□□□□□ -2.18
SDCBPO00560 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.42□□□□□ -2.18
SDCBPO00560 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.42□□□□□ -2.18
SDCBPO00560 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.42□□□□□ -2.18
SDCBPO00560 NRBF2P1-201ENST00000587407 859 ntBASIC1.42□□□□□ -2.18
SDCBPO00560 AL627230.6-201ENST00000611129 280 ntBASIC1.42□□□□□ -2.18
SDCBPO00560 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.42□□□□□ -2.18
SDCBPO00560 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC1.42□□□□□ -2.18
SDCBPO00560 AC002550.2-201ENST00000621246 394 ntBASIC1.42□□□□□ -2.18
SDCBPO00560 AC073592.7-201ENST00000623659 507 ntBASIC1.42□□□□□ -2.18
SDCBPO00560 AL390862.1-201ENST00000635467 1469 ntBASIC1.42□□□□□ -2.18
SDCBPO00560 MTCO1P4-201ENST00000520516 1409 ntBASIC1.41□□□□□ -2.18
SDCBPO00560 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.41□□□□□ -2.18
SDCBPO00560 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
SDCBPO00560 Y_RNA.25-201ENST00000362528 102 ntBASIC1.41□□□□□ -2.18
SDCBPO00560 RNU6-216P-201ENST00000363282 104 ntBASIC1.41□□□□□ -2.18
SDCBPO00560 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SDCBPO00560 PTGES3P2-201ENST00000407942 482 ntBASIC1.41□□□□□ -2.18
SDCBPO00560 RNA5SP270-201ENST00000411361 118 ntBASIC1.41□□□□□ -2.18
SDCBPO00560 HMGB1P49-201ENST00000418882 569 ntBASIC1.41□□□□□ -2.18
SDCBPO00560 BPY2DP-201ENST00000422208 265 ntBASIC1.41□□□□□ -2.18
SDCBPO00560 BX119904.4-201ENST00000424402 301 ntBASIC1.41□□□□□ -2.18
SDCBPO00560 MICF-203ENST00000432679 129 ntBASIC1.41□□□□□ -2.18
SDCBPO00560 RPL7P54-201ENST00000438336 674 ntBASIC1.41□□□□□ -2.18
SDCBPO00560 HMGB3P12-201ENST00000438745 556 ntBASIC1.41□□□□□ -2.18
SDCBPO00560 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.41□□□□□ -2.18
SDCBPO00560 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC1.41□□□□□ -2.18
SDCBPO00560 RPL26P9-201ENST00000457466 433 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms