Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
UPK1AO00322 AC136601.2-201ENST00000604356 474 ntBASIC1.92□□□□□ -2.1
UPK1AO00322 AC135507.1-201ENST00000607214 561 ntBASIC1.92□□□□□ -2.1
UPK1AO00322 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
UPK1AO00322 TUG1_2.1-201ENST00000614234 87 ntBASIC1.92□□□□□ -2.1
UPK1AO00322 SCARNA17.4-201ENST00000614296 143 ntBASIC1.92□□□□□ -2.1
UPK1AO00322 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
UPK1AO00322 AL031601.2-202ENST00000622650 282 ntBASIC1.92□□□□□ -2.1
UPK1AO00322 DUXAP9-208ENST00000622815 614 ntBASIC1.92□□□□□ -2.1
UPK1AO00322 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.92□□□□□ -2.1
UPK1AO00322 MTND4P35-201ENST00000604257 1375 ntBASIC1.92□□□□□ -2.1
UPK1AO00322 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.92□□□□□ -2.1
UPK1AO00322 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.91□□□□□ -2.1
UPK1AO00322 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.91□□□□□ -2.1
UPK1AO00322 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
UPK1AO00322 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.91□□□□□ -2.1
UPK1AO00322 AC092447.10-201ENST00000620607 1652 ntBASIC1.91□□□□□ -2.1
UPK1AO00322 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
UPK1AO00322 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
UPK1AO00322 RNU6-560P-201ENST00000364007 108 ntBASIC1.91□□□□□ -2.1
UPK1AO00322 RNU6-289P-201ENST00000364093 107 ntBASIC1.91□□□□□ -2.1
UPK1AO00322 RNU6-744P-201ENST00000365557 107 ntBASIC1.91□□□□□ -2.1
UPK1AO00322 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
UPK1AO00322 RNU1-52P-201ENST00000384190 164 ntBASIC1.91□□□□□ -2.1
UPK1AO00322 RNU6-1316P-201ENST00000384242 108 ntBASIC1.91□□□□□ -2.1
UPK1AO00322 RNU6-1072P-201ENST00000384703 107 ntBASIC1.91□□□□□ -2.1
UPK1AO00322 RNU6-443P-201ENST00000384780 107 ntBASIC1.91□□□□□ -2.1
UPK1AO00322 RNU6-750P-201ENST00000390946 107 ntBASIC1.91□□□□□ -2.1
UPK1AO00322 MIR1284-201ENST00000408337 120 ntBASIC1.91□□□□□ -2.1
UPK1AO00322 RNU2-40P-201ENST00000410833 196 ntBASIC1.91□□□□□ -2.1
UPK1AO00322 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
UPK1AO00322 AL139156.1-201ENST00000412785 841 ntBASIC1.91□□□□□ -2.1
UPK1AO00322 RPL17P12-201ENST00000413391 526 ntBASIC1.91□□□□□ -2.1
UPK1AO00322 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.91□□□□□ -2.1
UPK1AO00322 USP9YP13-201ENST00000417797 480 ntBASIC1.91□□□□□ -2.1
UPK1AO00322 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.91□□□□□ -2.1
UPK1AO00322 AL139415.2-201ENST00000431968 163 ntBASIC1.91□□□□□ -2.1
UPK1AO00322 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
UPK1AO00322 FAM103A2P-201ENST00000444122 354 ntBASIC1.91□□□□□ -2.1
UPK1AO00322 MEMO1P3-201ENST00000459811 302 ntBASIC1.91□□□□□ -2.1
UPK1AO00322 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.91□□□□□ -2.1
UPK1AO00322 NDUFB4P2-201ENST00000509515 391 ntBASIC1.91□□□□□ -2.1
UPK1AO00322 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.91□□□□□ -2.1
UPK1AO00322 AC022447.1-201ENST00000515358 464 ntBASIC1.91□□□□□ -2.1
UPK1AO00322 AC118942.1-201ENST00000529674 1035 ntBASIC1.91□□□□□ -2.1
UPK1AO00322 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.91□□□□□ -2.1
UPK1AO00322 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.91□□□□□ -2.1
UPK1AO00322 AL606834.3-201ENST00000602615 496 ntBASIC1.91□□□□□ -2.1
UPK1AO00322 AC239868.4-201ENST00000608318 671 ntBASIC1.91□□□□□ -2.1
UPK1AO00322 MIR219B-201ENST00000637023 88 ntBASIC1.91□□□□□ -2.1
UPK1AO00322 AC013437.2-201ENST00000639587 677 ntBASIC1.91□□□□□ -2.1
UPK1AO00322 AL137003.2-201ENST00000606924 2538 ntBASIC1.91□□□□□ -2.1
UPK1AO00322 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.91□□□□□ -2.1
UPK1AO00322 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.9□□□□□ -2.11
UPK1AO00322 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
UPK1AO00322 Y_RNA.311-201ENST00000365068 96 ntBASIC1.9□□□□□ -2.11
UPK1AO00322 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.9□□□□□ -2.11
UPK1AO00322 BTF3L4P3-201ENST00000418879 476 ntBASIC1.9□□□□□ -2.11
UPK1AO00322 SEPT2P1-201ENST00000419651 180 ntBASIC1.9□□□□□ -2.11
UPK1AO00322 AL139413.1-201ENST00000421309 217 ntBASIC1.9□□□□□ -2.11
UPK1AO00322 DPH3P2-201ENST00000422618 250 ntBASIC1.9□□□□□ -2.11
UPK1AO00322 AL953862.1-201ENST00000423016 168 ntBASIC1.9□□□□□ -2.11
UPK1AO00322 AC027124.2-201ENST00000428249 105 ntBASIC1.9□□□□□ -2.11
UPK1AO00322 AL035407.1-201ENST00000429211 571 ntBASIC1.9□□□□□ -2.11
UPK1AO00322 MED14P1-201ENST00000430517 648 ntBASIC1.9□□□□□ -2.11
UPK1AO00322 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.9□□□□□ -2.11
UPK1AO00322 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.9□□□□□ -2.11
UPK1AO00322 COX7BP2-201ENST00000437976 242 ntBASIC1.9□□□□□ -2.11
UPK1AO00322 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.9□□□□□ -2.11
UPK1AO00322 OSTCP8-201ENST00000445117 448 ntBASIC1.9□□□□□ -2.11
UPK1AO00322 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
UPK1AO00322 AC007327.1-201ENST00000447461 264 ntBASIC1.9□□□□□ -2.11
UPK1AO00322 AL353705.4-201ENST00000449661 238 ntBASIC1.9□□□□□ -2.11
UPK1AO00322 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.9□□□□□ -2.11
UPK1AO00322 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.9□□□□□ -2.11
UPK1AO00322 RNU5F-8P-201ENST00000515941 111 ntBASIC1.9□□□□□ -2.11
UPK1AO00322 SNORA19.3-201ENST00000516165 130 ntBASIC1.9□□□□□ -2.11
UPK1AO00322 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
UPK1AO00322 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.9□□□□□ -2.11
UPK1AO00322 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.9□□□□□ -2.11
UPK1AO00322 AC023824.2-201ENST00000566185 400 ntBASIC1.9□□□□□ -2.11
UPK1AO00322 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.9□□□□□ -2.11
UPK1AO00322 BNIP3P27-201ENST00000599991 412 ntBASIC1.9□□□□□ -2.11
UPK1AO00322 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.9□□□□□ -2.11
UPK1AO00322 APOOP1-201ENST00000604695 592 ntBASIC1.9□□□□□ -2.11
UPK1AO00322 AL449363.1-201ENST00000617815 186 ntBASIC1.9□□□□□ -2.11
UPK1AO00322 uc_338.20-201ENST00000621563 178 ntBASIC1.9□□□□□ -2.11
UPK1AO00322 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.9□□□□□ -2.11
UPK1AO00322 LINC02211-204ENST00000642024 1070 ntBASIC1.9□□□□□ -2.11
UPK1AO00322 AC009902.3-201ENST00000606235 2172 ntBASIC1.9□□□□□ -2.11
UPK1AO00322 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
UPK1AO00322 AC011477.1-204ENST00000623416 1325 ntBASIC1.9□□□□□ -2.11
UPK1AO00322 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
UPK1AO00322 RNU6-1083P-201ENST00000384022 107 ntBASIC1.89□□□□□ -2.11
UPK1AO00322 RNU6-1000P-201ENST00000391066 106 ntBASIC1.89□□□□□ -2.11
UPK1AO00322 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.89□□□□□ -2.11
UPK1AO00322 AC096649.2-201ENST00000416186 393 ntBASIC1.89□□□□□ -2.11
UPK1AO00322 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.89□□□□□ -2.11
UPK1AO00322 USP9YP11-201ENST00000427537 717 ntBASIC1.89□□□□□ -2.11
UPK1AO00322 ZYG11AP1-201ENST00000430329 837 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms