Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.73□□□□□ -2.29
COL6A5A8TX70 SNORA14A-201ENST00000364773 135 ntBASIC0.73□□□□□ -2.29
COL6A5A8TX70 TXNP7-201ENST00000406296 293 ntBASIC0.73□□□□□ -2.29
COL6A5A8TX70 RNA5SP193-201ENST00000410353 107 ntBASIC0.73□□□□□ -2.29
COL6A5A8TX70 COX6CP18-201ENST00000448769 222 ntBASIC0.73□□□□□ -2.29
COL6A5A8TX70 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC0.73□□□□□ -2.29
COL6A5A8TX70 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC0.73□□□□□ -2.29
COL6A5A8TX70 AC093510.2-201ENST00000562820 896 ntBASIC0.73□□□□□ -2.29
COL6A5A8TX70 AC006065.5-201ENST00000623427 349 ntBASIC0.73□□□□□ -2.29
COL6A5A8TX70 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
COL6A5A8TX70 AC099654.7-201ENST00000635788 2127 ntBASIC0.73□□□□□ -2.29
COL6A5A8TX70 AC073055.1-201ENST00000456901 1621 ntBASIC0.72□□□□□ -2.29
COL6A5A8TX70 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.72□□□□□ -2.29
COL6A5A8TX70 RNU4-73P-201ENST00000363164 141 ntBASIC0.72□□□□□ -2.29
COL6A5A8TX70 RNU2-71P-201ENST00000411395 189 ntBASIC0.72□□□□□ -2.29
COL6A5A8TX70 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.72□□□□□ -2.29
COL6A5A8TX70 RPL17P49-201ENST00000443728 411 ntBASIC0.72□□□□□ -2.29
COL6A5A8TX70 SNORD57-201ENST00000448188 72 ntBASIC0.72□□□□□ -2.29
COL6A5A8TX70 AL035407.2-201ENST00000454090 378 ntBASIC0.72□□□□□ -2.29
COL6A5A8TX70 AC114322.1-201ENST00000506771 926 ntBASIC0.72□□□□□ -2.29
COL6A5A8TX70 RNU6-964P-201ENST00000516524 69 ntBASIC0.72□□□□□ -2.29
COL6A5A8TX70 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.72□□□□□ -2.29
COL6A5A8TX70 AC079148.1-201ENST00000565944 819 ntBASIC0.72□□□□□ -2.29
COL6A5A8TX70 MIR3690-201ENST00000580266 75 ntBASIC0.72□□□□□ -2.29
COL6A5A8TX70 AP001180.3-201ENST00000582221 145 ntBASIC0.72□□□□□ -2.29
COL6A5A8TX70 AC135178.6-201ENST00000605314 398 ntBASIC0.72□□□□□ -2.29
COL6A5A8TX70 RPL21P136-201ENST00000605378 396 ntBASIC0.72□□□□□ -2.29
COL6A5A8TX70 AC007275.1-201ENST00000621243 671 ntBASIC0.72□□□□□ -2.29
COL6A5A8TX70 AP003122.6-201ENST00000623831 495 ntBASIC0.72□□□□□ -2.29
COL6A5A8TX70 Z69720.2-201ENST00000624755 279 ntBASIC0.72□□□□□ -2.29
COL6A5A8TX70 Y_RNA.65-201ENST00000362846 100 ntBASIC0.72□□□□□ -2.29
COL6A5A8TX70 SNORD56-201ENST00000413522 71 ntBASIC0.72□□□□□ -2.29
COL6A5A8TX70 AC073464.3-201ENST00000422564 712 ntBASIC0.72□□□□□ -2.29
COL6A5A8TX70 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC0.72□□□□□ -2.29
COL6A5A8TX70 AL606489.2-201ENST00000433886 234 ntBASIC0.72□□□□□ -2.29
COL6A5A8TX70 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC0.72□□□□□ -2.29
COL6A5A8TX70 ARF4P4-201ENST00000439608 520 ntBASIC0.72□□□□□ -2.29
COL6A5A8TX70 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC0.72□□□□□ -2.29
COL6A5A8TX70 RPS27P1-201ENST00000450552 247 ntBASIC0.72□□□□□ -2.29
COL6A5A8TX70 FO393415.2-201ENST00000480085 343 ntBASIC0.72□□□□□ -2.29
COL6A5A8TX70 RN7SKP179-201ENST00000516126 217 ntBASIC0.72□□□□□ -2.29
COL6A5A8TX70 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC0.72□□□□□ -2.29
COL6A5A8TX70 NDUFS5P6-201ENST00000529136 295 ntBASIC0.72□□□□□ -2.29
COL6A5A8TX70 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC0.72□□□□□ -2.29
COL6A5A8TX70 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.72□□□□□ -2.29
COL6A5A8TX70 AC005786.1-201ENST00000588553 154 ntBASIC0.72□□□□□ -2.29
COL6A5A8TX70 AP001486.3-201ENST00000615334 372 ntBASIC0.72□□□□□ -2.29
COL6A5A8TX70 HMGB1P24-202ENST00000615653 685 ntBASIC0.72□□□□□ -2.29
COL6A5A8TX70 AC022079.2-201ENST00000619739 566 ntBASIC0.72□□□□□ -2.29
COL6A5A8TX70 AC011330.2-201ENST00000621680 635 ntBASIC0.72□□□□□ -2.29
COL6A5A8TX70 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
COL6A5A8TX70 RNU6-185P-201ENST00000384421 107 ntBASIC0.71□□□□□ -2.3
COL6A5A8TX70 MIR627-201ENST00000384979 97 ntBASIC0.71□□□□□ -2.3
COL6A5A8TX70 CCNB2P1-201ENST00000399411 1150 ntBASIC0.71□□□□□ -2.3
COL6A5A8TX70 AC092745.2-202ENST00000411880 369 ntBASIC0.71□□□□□ -2.3
COL6A5A8TX70 MTCO3P46-201ENST00000425787 232 ntBASIC0.71□□□□□ -2.3
COL6A5A8TX70 HMGN2P16-201ENST00000456802 261 ntBASIC0.71□□□□□ -2.3
COL6A5A8TX70 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
COL6A5A8TX70 RNU2-44P-201ENST00000516795 194 ntBASIC0.71□□□□□ -2.3
COL6A5A8TX70 CYCSP26-201ENST00000534107 320 ntBASIC0.71□□□□□ -2.3
COL6A5A8TX70 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.71□□□□□ -2.3
COL6A5A8TX70 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.71□□□□□ -2.3
COL6A5A8TX70 AC008749.1-201ENST00000597650 306 ntBASIC0.71□□□□□ -2.3
COL6A5A8TX70 SDR42E1P2-201ENST00000614861 481 ntBASIC0.71□□□□□ -2.3
COL6A5A8TX70 SDR42E1P4-201ENST00000620894 481 ntBASIC0.71□□□□□ -2.3
COL6A5A8TX70 RPL7P27-201ENST00000403775 720 ntBASIC0.71□□□□□ -2.3
COL6A5A8TX70 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC0.71□□□□□ -2.3
COL6A5A8TX70 AC013268.2-201ENST00000420753 337 ntBASIC0.71□□□□□ -2.3
COL6A5A8TX70 NAP1L4P3-201ENST00000432820 1147 ntBASIC0.71□□□□□ -2.3
COL6A5A8TX70 OSBPL9P3-201ENST00000534523 595 ntBASIC0.71□□□□□ -2.3
COL6A5A8TX70 MIR4658-201ENST00000584344 65 ntBASIC0.71□□□□□ -2.3
COL6A5A8TX70 AC006213.5-201ENST00000619673 288 ntBASIC0.71□□□□□ -2.3
COL6A5A8TX70 AL162373.1-201ENST00000620433 407 ntBASIC0.71□□□□□ -2.3
COL6A5A8TX70 SNORA4.3-201ENST00000365564 137 ntBASIC0.7□□□□□ -2.3
COL6A5A8TX70 CISD1P1-201ENST00000393907 327 ntBASIC0.7□□□□□ -2.3
COL6A5A8TX70 RNU2-70P-201ENST00000410718 179 ntBASIC0.7□□□□□ -2.3
COL6A5A8TX70 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.7□□□□□ -2.3
COL6A5A8TX70 ELOCP6-201ENST00000429066 328 ntBASIC0.7□□□□□ -2.3
COL6A5A8TX70 ELOCP12-201ENST00000458706 328 ntBASIC0.7□□□□□ -2.3
COL6A5A8TX70 AC025768.1-201ENST00000510057 267 ntBASIC0.7□□□□□ -2.3
COL6A5A8TX70 MRPS17P9-201ENST00000511924 393 ntBASIC0.7□□□□□ -2.3
COL6A5A8TX70 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC0.7□□□□□ -2.3
COL6A5A8TX70 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC0.7□□□□□ -2.3
COL6A5A8TX70 SNORD95.1-201ENST00000364099 68 ntBASIC0.7□□□□□ -2.3
COL6A5A8TX70 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC0.7□□□□□ -2.3
COL6A5A8TX70 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.7□□□□□ -2.3
COL6A5A8TX70 RN7SKP51-201ENST00000410781 304 ntBASIC0.7□□□□□ -2.3
COL6A5A8TX70 AL591704.2-201ENST00000421658 181 ntBASIC0.7□□□□□ -2.3
COL6A5A8TX70 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC0.7□□□□□ -2.3
COL6A5A8TX70 PMCHL2-203ENST00000457791 237 ntBASIC0.7□□□□□ -2.3
COL6A5A8TX70 AC010683.1-201ENST00000473673 378 ntBASIC0.7□□□□□ -2.3
COL6A5A8TX70 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
COL6A5A8TX70 KLRA1P-201ENST00000503499 986 ntBASIC0.7□□□□□ -2.3
COL6A5A8TX70 OR5BM1P-201ENST00000512021 366 ntBASIC0.7□□□□□ -2.3
COL6A5A8TX70 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC0.7□□□□□ -2.3
COL6A5A8TX70 EIF4A1P12-201ENST00000551910 141 ntBASIC0.7□□□□□ -2.3
COL6A5A8TX70 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.7□□□□□ -2.3
COL6A5A8TX70 AC240442.1-201ENST00000616055 283 ntBASIC0.7□□□□□ -2.3
COL6A5A8TX70 AC068831.7-201ENST00000616954 363 ntBASIC0.7□□□□□ -2.3
COL6A5A8TX70 uc_338.9-201ENST00000617424 182 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms