Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 MIR3922-201ENST00000585192 84 ntBASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 AL035413.2-201ENST00000604801 525 ntBASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 U1.23-201ENST00000610293 146 ntBASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 AL355073.2-201ENST00000612106 557 ntBASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 AC012409.4-201ENST00000612923 249 ntBASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 RNU1-68P-201ENST00000615382 146 ntBASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 U1.39-201ENST00000621562 146 ntBASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 AC017071.1-201ENST00000564407 2204 ntBASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
TCRBV7S3A2A0A539 Y_RNA.303-201ENST00000364998 94 ntBASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 AL359837.1-201ENST00000381357 287 ntBASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 SNORA57.1-201ENST00000391227 145 ntBASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 HSPE1P26-201ENST00000405341 275 ntBASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 RNU6-373P-201ENST00000411247 98 ntBASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 AC138393.2-201ENST00000414742 246 ntBASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 RPL36AP53-201ENST00000432891 316 ntBASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 AC073063.1-201ENST00000434352 607 ntBASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 AL354685.2-201ENST00000448218 1447 ntBASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 AL162395.1-201ENST00000457882 422 ntBASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 RPS20P22-201ENST00000473700 357 ntBASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 RPL23AP11-201ENST00000475260 469 ntBASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 MTCYBP18-201ENST00000501056 747 ntBASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 AC104806.1-201ENST00000508720 308 ntBASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 RNU2-58P-201ENST00000516403 183 ntBASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 RNU6-677P-201ENST00000516914 101 ntBASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 AC106785.1-201ENST00000565935 262 ntBASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 AC015917.1-201ENST00000579654 510 ntBASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 MIR4424-201ENST00000585257 86 ntBASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 AC007687.1-201ENST00000602704 304 ntBASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 AC008945.2-201ENST00000606056 604 ntBASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 AL713922.2-201ENST00000619384 716 ntBASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 AC010338.1-201ENST00000621823 717 ntBASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 AL008636.1-201ENST00000625038 1018 ntBASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TCRBV7S3A2A0A539 AC008568.2-201ENST00000623862 2313 ntBASIC3.39□□□□□ -1.87
TCRBV7S3A2A0A539 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TCRBV7S3A2A0A539 AP001486.2-201ENST00000561652 5113 ntBASIC3.39□□□□□ -1.87
TCRBV7S3A2A0A539 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.39□□□□□ -1.87
TCRBV7S3A2A0A539 RNA5SP119-201ENST00000362715 117 ntBASIC3.39□□□□□ -1.87
TCRBV7S3A2A0A539 SNORD56.3-201ENST00000363507 71 ntBASIC3.39□□□□□ -1.87
TCRBV7S3A2A0A539 MT-TL1-201ENST00000386347 75 ntBASIC3.39□□□□□ -1.87
TCRBV7S3A2A0A539 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
TCRBV7S3A2A0A539 MIR1183-201ENST00000408856 89 ntBASIC3.39□□□□□ -1.87
TCRBV7S3A2A0A539 RNU4-46P-201ENST00000410818 138 ntBASIC3.39□□□□□ -1.87
TCRBV7S3A2A0A539 AC022028.1-201ENST00000412054 408 ntBASIC3.39□□□□□ -1.87
TCRBV7S3A2A0A539 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TCRBV7S3A2A0A539 Z85995.1-201ENST00000415547 335 ntBASIC3.39□□□□□ -1.87
TCRBV7S3A2A0A539 RPL7P46-201ENST00000425129 740 ntBASIC3.39□□□□□ -1.87
TCRBV7S3A2A0A539 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.39□□□□□ -1.87
TCRBV7S3A2A0A539 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.39□□□□□ -1.87
TCRBV7S3A2A0A539 SRIP2-201ENST00000428470 166 ntBASIC3.39□□□□□ -1.87
TCRBV7S3A2A0A539 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.39□□□□□ -1.87
TCRBV7S3A2A0A539 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.39□□□□□ -1.87
TCRBV7S3A2A0A539 PRDX3P3-201ENST00000447765 522 ntBASIC3.39□□□□□ -1.87
TCRBV7S3A2A0A539 RNU7-180P-201ENST00000459240 63 ntBASIC3.39□□□□□ -1.87
TCRBV7S3A2A0A539 RPL21P104-201ENST00000464143 478 ntBASIC3.39□□□□□ -1.87
TCRBV7S3A2A0A539 SNORA64.4-201ENST00000516632 81 ntBASIC3.39□□□□□ -1.87
TCRBV7S3A2A0A539 SNORA20.3-201ENST00000516880 132 ntBASIC3.39□□□□□ -1.87
TCRBV7S3A2A0A539 RN7SKP289-201ENST00000517244 295 ntBASIC3.39□□□□□ -1.87
TCRBV7S3A2A0A539 TRMT10BP1-201ENST00000519377 943 ntBASIC3.39□□□□□ -1.87
TCRBV7S3A2A0A539 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.39□□□□□ -1.87
TCRBV7S3A2A0A539 AC135001.1-201ENST00000544546 283 ntBASIC3.39□□□□□ -1.87
TCRBV7S3A2A0A539 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.39□□□□□ -1.87
TCRBV7S3A2A0A539 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.39□□□□□ -1.87
TCRBV7S3A2A0A539 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.39□□□□□ -1.87
TCRBV7S3A2A0A539 AL359547.2-201ENST00000615810 418 ntBASIC3.39□□□□□ -1.87
TCRBV7S3A2A0A539 AC006504.8-201ENST00000621046 635 ntBASIC3.39□□□□□ -1.87
TCRBV7S3A2A0A539 AC039056.2-201ENST00000622261 511 ntBASIC3.39□□□□□ -1.87
TCRBV7S3A2A0A539 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
TCRBV7S3A2A0A539 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.39□□□□□ -1.87
TCRBV7S3A2A0A539 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.39□□□□□ -1.87
TCRBV7S3A2A0A539 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.39□□□□□ -1.87
TCRBV7S3A2A0A539 AF117829.1-206ENST00000621883 3802 ntBASIC3.39□□□□□ -1.87
TCRBV7S3A2A0A539 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TCRBV7S3A2A0A539 CASC19-280ENST00000642102 1351 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms