Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.51□□□□□ -2.01
SMIM28A0A1B0GU29 AC009237.8-201ENST00000445492 379 ntBASIC2.51□□□□□ -2.01
SMIM28A0A1B0GU29 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.51□□□□□ -2.01
SMIM28A0A1B0GU29 ZNF114P1-201ENST00000453500 292 ntBASIC2.51□□□□□ -2.01
SMIM28A0A1B0GU29 AC010099.1-201ENST00000455434 375 ntBASIC2.51□□□□□ -2.01
SMIM28A0A1B0GU29 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.51□□□□□ -2.01
SMIM28A0A1B0GU29 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.51□□□□□ -2.01
SMIM28A0A1B0GU29 AC008481.1-201ENST00000463278 396 ntBASIC2.51□□□□□ -2.01
SMIM28A0A1B0GU29 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.51□□□□□ -2.01
SMIM28A0A1B0GU29 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.51□□□□□ -2.01
SMIM28A0A1B0GU29 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.51□□□□□ -2.01
SMIM28A0A1B0GU29 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.51□□□□□ -2.01
SMIM28A0A1B0GU29 RNU6-928P-201ENST00000516876 104 ntBASIC2.51□□□□□ -2.01
SMIM28A0A1B0GU29 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.51□□□□□ -2.01
SMIM28A0A1B0GU29 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.51□□□□□ -2.01
SMIM28A0A1B0GU29 DUXAP5-201ENST00000529668 529 ntBASIC2.51□□□□□ -2.01
SMIM28A0A1B0GU29 MTCO3P13-201ENST00000577757 781 ntBASIC2.51□□□□□ -2.01
SMIM28A0A1B0GU29 AC007038.2-201ENST00000608095 740 ntBASIC2.51□□□□□ -2.01
SMIM28A0A1B0GU29 AC093838.1-201ENST00000613014 469 ntBASIC2.51□□□□□ -2.01
SMIM28A0A1B0GU29 AC104010.1-201ENST00000616889 150 ntBASIC2.51□□□□□ -2.01
SMIM28A0A1B0GU29 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.51□□□□□ -2.01
SMIM28A0A1B0GU29 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.51□□□□□ -2.01
SMIM28A0A1B0GU29 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.51□□□□□ -2.01
SMIM28A0A1B0GU29 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
SMIM28A0A1B0GU29 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.51□□□□□ -2.01
SMIM28A0A1B0GU29 MTND5P6-201ENST00000422338 1798 ntBASIC2.51□□□□□ -2.01
SMIM28A0A1B0GU29 PABPC1P9-201ENST00000426076 1612 ntBASIC2.5□□□□□ -2.01
SMIM28A0A1B0GU29 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.5□□□□□ -2.01
SMIM28A0A1B0GU29 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.5□□□□□ -2.01
SMIM28A0A1B0GU29 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
SMIM28A0A1B0GU29 BTF3P7-201ENST00000407097 488 ntBASIC2.5□□□□□ -2.01
SMIM28A0A1B0GU29 USP9YP26-201ENST00000421008 661 ntBASIC2.5□□□□□ -2.01
SMIM28A0A1B0GU29 RPS27AP14-201ENST00000422868 454 ntBASIC2.5□□□□□ -2.01
SMIM28A0A1B0GU29 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.5□□□□□ -2.01
SMIM28A0A1B0GU29 RPL7L1P10-201ENST00000427790 463 ntBASIC2.5□□□□□ -2.01
SMIM28A0A1B0GU29 AC109583.1-201ENST00000432156 268 ntBASIC2.5□□□□□ -2.01
SMIM28A0A1B0GU29 AC018634.1-201ENST00000437554 401 ntBASIC2.5□□□□□ -2.01
SMIM28A0A1B0GU29 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.5□□□□□ -2.01
SMIM28A0A1B0GU29 AC005094.1-201ENST00000440420 368 ntBASIC2.5□□□□□ -2.01
SMIM28A0A1B0GU29 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.5□□□□□ -2.01
SMIM28A0A1B0GU29 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SMIM28A0A1B0GU29 SNRPGP6-201ENST00000451124 220 ntBASIC2.5□□□□□ -2.01
SMIM28A0A1B0GU29 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.5□□□□□ -2.01
SMIM28A0A1B0GU29 AC092798.1-201ENST00000458542 409 ntBASIC2.5□□□□□ -2.01
SMIM28A0A1B0GU29 RPL23AP49-201ENST00000492925 468 ntBASIC2.5□□□□□ -2.01
SMIM28A0A1B0GU29 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.5□□□□□ -2.01
SMIM28A0A1B0GU29 AP000907.2-201ENST00000530827 353 ntBASIC2.5□□□□□ -2.01
SMIM28A0A1B0GU29 SETP2-201ENST00000553886 926 ntBASIC2.5□□□□□ -2.01
SMIM28A0A1B0GU29 AC012435.1-202ENST00000568772 240 ntBASIC2.5□□□□□ -2.01
SMIM28A0A1B0GU29 MIR4293-201ENST00000584305 78 ntBASIC2.5□□□□□ -2.01
SMIM28A0A1B0GU29 MTCYBP22-201ENST00000603788 447 ntBASIC2.5□□□□□ -2.01
SMIM28A0A1B0GU29 AC112187.2-201ENST00000604345 283 ntBASIC2.5□□□□□ -2.01
SMIM28A0A1B0GU29 AC010133.1-201ENST00000615809 842 ntBASIC2.5□□□□□ -2.01
SMIM28A0A1B0GU29 AC079248.2-201ENST00000623779 326 ntBASIC2.5□□□□□ -2.01
SMIM28A0A1B0GU29 AL136313.1-201ENST00000624804 202 ntBASIC2.5□□□□□ -2.01
SMIM28A0A1B0GU29 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SMIM28A0A1B0GU29 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.5□□□□□ -2.01
SMIM28A0A1B0GU29 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.5□□□□□ -2.01
SMIM28A0A1B0GU29 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SMIM28A0A1B0GU29 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.5□□□□□ -2.01
SMIM28A0A1B0GU29 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 AC007785.2-201ENST00000598627 1916 ntBASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 RNU6-553P-201ENST00000364047 96 ntBASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 RNU1-73P-201ENST00000383971 164 ntBASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 RNA5SP425-201ENST00000410336 112 ntBASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 AL135786.1-201ENST00000415892 214 ntBASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 AC234781.2-201ENST00000426370 994 ntBASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 AL356320.1-201ENST00000429616 163 ntBASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 AL365184.2-201ENST00000431139 435 ntBASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 AL512844.2-201ENST00000433990 593 ntBASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 RPS15AP28-201ENST00000435088 386 ntBASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 SETP8-201ENST00000435341 628 ntBASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 RPL35AP22-201ENST00000436855 335 ntBASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 BNIP3P2-201ENST00000441221 577 ntBASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 CBWD4P-201ENST00000445695 655 ntBASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 AL133217.1-201ENST00000450980 425 ntBASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 TBCAP3-201ENST00000512475 312 ntBASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 AC116347.2-201ENST00000514912 523 ntBASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 RNU6-64P-201ENST00000517119 105 ntBASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 RNU6-232P-201ENST00000517144 64 ntBASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 ZNF519P3-201ENST00000557158 1032 ntBASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 AMZ2P1-203ENST00000565833 850 ntBASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 AC091489.2-201ENST00000566263 604 ntBASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 AC090616.2-202ENST00000584248 222 ntBASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 AF038458.1-201ENST00000588406 262 ntBASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 AC116312.1-201ENST00000606841 314 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms