Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 AL356131.1-201ENST00000405826 414 ntBASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 VN1R36P-201ENST00000414936 291 ntBASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 RPL26P6-201ENST00000440913 438 ntBASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 AL049734.2-201ENST00000441066 616 ntBASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 HMGN3P1-201ENST00000453847 193 ntBASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 SUMO2P2-201ENST00000456482 255 ntBASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 snoU13.15-201ENST00000459407 104 ntBASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 AC027575.1-201ENST00000481064 460 ntBASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 HMGB1P36-201ENST00000487709 576 ntBASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 AC093852.1-201ENST00000503587 266 ntBASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 RNA5SP137-201ENST00000516833 135 ntBASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 HIGD1AP6-201ENST00000521833 279 ntBASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 RRN3P3-201ENST00000549207 578 ntBASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 AC004217.3-201ENST00000551552 878 ntBASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 AP001269.3-201ENST00000588718 329 ntBASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 SNORD114-21-201ENST00000606412 72 ntBASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 AC016542.1-201ENST00000608259 493 ntBASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 AC021851.1-201ENST00000608537 1082 ntBASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 AC017104.5-201ENST00000637647 639 ntBASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 LINC02211-204ENST00000642024 1070 ntBASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 ANKRD26P2-201ENST00000445530 1710 ntBASIC0.89□□□□□ -2.27
TRAV1-2A0A0B4J238 U3.13-201ENST00000364804 214 ntBASIC0.88□□□□□ -2.27
TRAV1-2A0A0B4J238 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC0.88□□□□□ -2.27
TRAV1-2A0A0B4J238 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC0.88□□□□□ -2.27
TRAV1-2A0A0B4J238 SFR1P2-201ENST00000421841 730 ntBASIC0.88□□□□□ -2.27
TRAV1-2A0A0B4J238 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC0.88□□□□□ -2.27
TRAV1-2A0A0B4J238 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC0.88□□□□□ -2.27
TRAV1-2A0A0B4J238 AL096803.2-201ENST00000450032 677 ntBASIC0.88□□□□□ -2.27
TRAV1-2A0A0B4J238 RN7SKP210-201ENST00000459176 261 ntBASIC0.88□□□□□ -2.27
TRAV1-2A0A0B4J238 AC138853.1-201ENST00000503549 823 ntBASIC0.88□□□□□ -2.27
TRAV1-2A0A0B4J238 AC008526.1-201ENST00000509149 338 ntBASIC0.88□□□□□ -2.27
TRAV1-2A0A0B4J238 RNA5SP445-201ENST00000515889 115 ntBASIC0.88□□□□□ -2.27
TRAV1-2A0A0B4J238 AP005660.1-201ENST00000522972 293 ntBASIC0.88□□□□□ -2.27
TRAV1-2A0A0B4J238 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC0.88□□□□□ -2.27
TRAV1-2A0A0B4J238 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.88□□□□□ -2.27
TRAV1-2A0A0B4J238 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC0.88□□□□□ -2.27
TRAV1-2A0A0B4J238 AC233702.2-202ENST00000562547 291 ntBASIC0.88□□□□□ -2.27
TRAV1-2A0A0B4J238 AC022254.1-201ENST00000567857 235 ntBASIC0.88□□□□□ -2.27
TRAV1-2A0A0B4J238 AC074051.3-201ENST00000570238 358 ntBASIC0.88□□□□□ -2.27
TRAV1-2A0A0B4J238 AP000403.1-201ENST00000603349 851 ntBASIC0.88□□□□□ -2.27
TRAV1-2A0A0B4J238 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC0.88□□□□□ -2.27
TRAV1-2A0A0B4J238 AL512598.1-201ENST00000610158 273 ntBASIC0.88□□□□□ -2.27
TRAV1-2A0A0B4J238 AC008498.1-201ENST00000613012 531 ntBASIC0.88□□□□□ -2.27
TRAV1-2A0A0B4J238 AC009318.4-201ENST00000620496 486 ntBASIC0.88□□□□□ -2.27
TRAV1-2A0A0B4J238 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC0.88□□□□□ -2.27
TRAV1-2A0A0B4J238 AL356585.4-201ENST00000623078 1229 ntBASIC0.88□□□□□ -2.27
TRAV1-2A0A0B4J238 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC0.88□□□□□ -2.27
TRAV1-2A0A0B4J238 AC092608.3-201ENST00000625017 386 ntBASIC0.88□□□□□ -2.27
TRAV1-2A0A0B4J238 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC0.88□□□□□ -2.27
TRAV1-2A0A0B4J238 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.88□□□□□ -2.27
TRAV1-2A0A0B4J238 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
TRAV1-2A0A0B4J238 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
TRAV1-2A0A0B4J238 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.87□□□□□ -2.27
TRAV1-2A0A0B4J238 RNU1-72P-201ENST00000362976 153 ntBASIC0.87□□□□□ -2.27
TRAV1-2A0A0B4J238 RNU6-217P-201ENST00000384164 104 ntBASIC0.87□□□□□ -2.27
TRAV1-2A0A0B4J238 MIR135A2-201ENST00000384854 100 ntBASIC0.87□□□□□ -2.27
TRAV1-2A0A0B4J238 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
TRAV1-2A0A0B4J238 RPL23AP29-201ENST00000397284 453 ntBASIC0.87□□□□□ -2.27
TRAV1-2A0A0B4J238 U6atac.2-201ENST00000408644 118 ntBASIC0.87□□□□□ -2.27
TRAV1-2A0A0B4J238 RNU2-49P-201ENST00000410666 184 ntBASIC0.87□□□□□ -2.27
TRAV1-2A0A0B4J238 BOLA3P4-201ENST00000418151 400 ntBASIC0.87□□□□□ -2.27
TRAV1-2A0A0B4J238 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV1-2A0A0B4J238 RPL30P4-201ENST00000429309 333 ntBASIC0.87□□□□□ -2.27
TRAV1-2A0A0B4J238 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC0.87□□□□□ -2.27
TRAV1-2A0A0B4J238 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV1-2A0A0B4J238 AC092685.1-201ENST00000447960 1243 ntBASIC0.87□□□□□ -2.27
TRAV1-2A0A0B4J238 COX6CP18-201ENST00000448769 222 ntBASIC0.87□□□□□ -2.27
TRAV1-2A0A0B4J238 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV1-2A0A0B4J238 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC0.87□□□□□ -2.27
TRAV1-2A0A0B4J238 AC117503.1-201ENST00000472241 394 ntBASIC0.87□□□□□ -2.27
TRAV1-2A0A0B4J238 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.87□□□□□ -2.27
TRAV1-2A0A0B4J238 LARP1BP2-201ENST00000486594 519 ntBASIC0.87□□□□□ -2.27
TRAV1-2A0A0B4J238 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV1-2A0A0B4J238 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV1-2A0A0B4J238 AC006390.1-201ENST00000508068 283 ntBASIC0.87□□□□□ -2.27
TRAV1-2A0A0B4J238 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC0.87□□□□□ -2.27
TRAV1-2A0A0B4J238 RNA5SP165-201ENST00000517142 115 ntBASIC0.87□□□□□ -2.27
TRAV1-2A0A0B4J238 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.87□□□□□ -2.27
TRAV1-2A0A0B4J238 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV1-2A0A0B4J238 CA1-215ENST00000522389 551 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV1-2A0A0B4J238 AP000916.1-201ENST00000533869 835 ntBASIC0.87□□□□□ -2.27
TRAV1-2A0A0B4J238 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC0.87□□□□□ -2.27
TRAV1-2A0A0B4J238 AC018618.2-201ENST00000604770 446 ntBASIC0.87□□□□□ -2.27
TRAV1-2A0A0B4J238 AC069294.1-201ENST00000608397 350 ntBASIC0.87□□□□□ -2.27
TRAV1-2A0A0B4J238 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV1-2A0A0B4J238 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC0.87□□□□□ -2.27
TRAV1-2A0A0B4J238 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC0.87□□□□□ -2.27
TRAV1-2A0A0B4J238 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms