Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 RMST_9.1-201ENST00000619945 193 ntBASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 AC024940.5-201ENST00000622889 474 ntBASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL4A3BPQ9Y5P4 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 Y_RNA.33-201ENST00000362591 102 ntBASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 RNU6-552P-201ENST00000362869 119 ntBASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 RNU6-270P-201ENST00000364131 105 ntBASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 RNU6-483P-201ENST00000384088 108 ntBASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 SNORD37.1-201ENST00000390968 65 ntBASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 HMGN2P8-201ENST00000391458 268 ntBASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 PTMAP2-201ENST00000397627 327 ntBASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 MTHFD2P2-201ENST00000407725 247 ntBASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 AC063979.1-201ENST00000415539 377 ntBASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 MTCO1P20-201ENST00000425366 358 ntBASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 AC008264.1-201ENST00000447612 367 ntBASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 RPL37P4-201ENST00000448908 268 ntBASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 snoU13.28-201ENST00000459235 104 ntBASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 MTAPP1-201ENST00000489154 819 ntBASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 SUMO2P6-201ENST00000505273 288 ntBASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 MTND4LP26-201ENST00000518144 282 ntBASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 SUMO2P20-201ENST00000520803 283 ntBASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 AP005435.4-201ENST00000529514 284 ntBASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 MIR4429-201ENST00000580105 73 ntBASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 AC107304.1-201ENST00000604229 296 ntBASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 AC012442.3-202ENST00000636742 206 ntBASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 NCAPGP1-201ENST00000505112 1814 ntBASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL4A3BPQ9Y5P4 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 FRG1CP-201ENST00000358464 769 ntBASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 SNORA4.3-201ENST00000365564 137 ntBASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 MIR23B-201ENST00000384832 97 ntBASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 RNU6-903P-201ENST00000391270 109 ntBASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 UBE2V1P2-201ENST00000397758 440 ntBASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 RPL26P27-201ENST00000414397 437 ntBASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 MTCYBP8-201ENST00000422855 651 ntBASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 CACYBPP2-201ENST00000453625 678 ntBASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 AC010099.1-201ENST00000455434 375 ntBASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 RPL7P47-201ENST00000497299 556 ntBASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 SNORD59.2-201ENST00000516873 68 ntBASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 RNU6-835P-201ENST00000516974 104 ntBASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 IGKV2-23-201ENST00000518729 323 ntBASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 TRMT10BP1-201ENST00000519377 943 ntBASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 MIR5692A1-201ENST00000580523 69 ntBASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 MIR548AC-201ENST00000585049 88 ntBASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 MTND5P7-201ENST00000413558 1798 ntBASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 ZNF285B-201ENST00000561698 1767 ntBASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.22□□□□□ -1.73
COL4A3BPQ9Y5P4 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.21□□□□□ -1.73
COL4A3BPQ9Y5P4 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.21□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms