Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.96□□□□□ -1.93
PCDHGA1Q9Y5H4 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 SNORD21-201ENST00000383953 95 ntBASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 RNU6-533P-201ENST00000384144 107 ntBASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 TIMM9P1-201ENST00000436122 256 ntBASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 AC105272.1-201ENST00000438604 198 ntBASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 RPL22P17-201ENST00000438729 315 ntBASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 AC005094.1-201ENST00000440420 368 ntBASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 AL135938.1-201ENST00000443141 297 ntBASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 AC020550.1-201ENST00000447385 163 ntBASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 HMGN1P18-201ENST00000457642 277 ntBASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 AC010631.1-201ENST00000474150 156 ntBASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 AP000797.1-201ENST00000478870 387 ntBASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 SEM1P1-201ENST00000506694 209 ntBASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 AC114786.4-201ENST00000508771 728 ntBASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 AC114797.1-201ENST00000514003 728 ntBASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 DEFB108A-201ENST00000530110 222 ntBASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 HSPE1P20-201ENST00000538133 289 ntBASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 AC123904.2-201ENST00000548059 300 ntBASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 ZNF519P3-201ENST00000557158 1032 ntBASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 AC068135.2-201ENST00000569293 1028 ntBASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 KC877982.1-201ENST00000602313 470 ntBASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 AL391813.2-201ENST00000609113 322 ntBASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 AC012360.2-201ENST00000609349 391 ntBASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 AC091931.1-201ENST00000623488 728 ntBASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 MAPK10-266ENST00000641066 6555 ntBASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
PCDHGA1Q9Y5H4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PCDHGA1Q9Y5H4 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PCDHGA1Q9Y5H4 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
PCDHGA1Q9Y5H4 MIR148B-201ENST00000362252 99 ntBASIC2.95□□□□□ -1.94
PCDHGA1Q9Y5H4 RNU5E-5P-201ENST00000365379 116 ntBASIC2.95□□□□□ -1.94
PCDHGA1Q9Y5H4 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.95□□□□□ -1.94
PCDHGA1Q9Y5H4 AC244035.1-201ENST00000430042 390 ntBASIC2.95□□□□□ -1.94
PCDHGA1Q9Y5H4 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.95□□□□□ -1.94
PCDHGA1Q9Y5H4 RPS24P13-201ENST00000442520 397 ntBASIC2.95□□□□□ -1.94
PCDHGA1Q9Y5H4 AL590365.1-201ENST00000450788 243 ntBASIC2.95□□□□□ -1.94
PCDHGA1Q9Y5H4 MTND3P7-201ENST00000474435 343 ntBASIC2.95□□□□□ -1.94
PCDHGA1Q9Y5H4 RPS27P26-201ENST00000494583 239 ntBASIC2.95□□□□□ -1.94
PCDHGA1Q9Y5H4 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.95□□□□□ -1.94
PCDHGA1Q9Y5H4 RNU6-64P-201ENST00000517119 105 ntBASIC2.95□□□□□ -1.94
PCDHGA1Q9Y5H4 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.95□□□□□ -1.94
PCDHGA1Q9Y5H4 MIR3146-201ENST00000580367 79 ntBASIC2.95□□□□□ -1.94
PCDHGA1Q9Y5H4 AC083760.1-201ENST00000589621 670 ntBASIC2.95□□□□□ -1.94
PCDHGA1Q9Y5H4 AC136601.2-201ENST00000604356 474 ntBASIC2.95□□□□□ -1.94
PCDHGA1Q9Y5H4 AC090970.3-201ENST00000612566 866 ntBASIC2.95□□□□□ -1.94
PCDHGA1Q9Y5H4 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.95□□□□□ -1.94
PCDHGA1Q9Y5H4 MTND4P4-201ENST00000439033 1366 ntBASIC2.95□□□□□ -1.94
PCDHGA1Q9Y5H4 AL136360.1-201ENST00000503377 1900 ntBASIC2.95□□□□□ -1.94
PCDHGA1Q9Y5H4 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PCDHGA1Q9Y5H4 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 MTND5P29-201ENST00000458676 1807 ntBASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 RNU5F-7P-201ENST00000363696 115 ntBASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 RNU6-1284P-201ENST00000363701 100 ntBASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 RNY3P9-201ENST00000384727 106 ntBASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 FO393413.1-201ENST00000402892 195 ntBASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 Y_RNA.608-201ENST00000410647 95 ntBASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 AC245291.1-201ENST00000419501 328 ntBASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 NUP35P1-201ENST00000422734 947 ntBASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 UBE2D3P4-201ENST00000441973 436 ntBASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 DDX3P2-201ENST00000446138 111 ntBASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 COX6CP12-201ENST00000446748 202 ntBASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 RPS15AP27-201ENST00000449183 343 ntBASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 RPS29P26-201ENST00000477483 171 ntBASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 AC126182.1-201ENST00000478134 357 ntBASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 AC113155.1-201ENST00000511141 769 ntBASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 AC007115.1-201ENST00000546853 234 ntBASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 AC128657.1-201ENST00000549459 145 ntBASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 NACAP3-201ENST00000552100 481 ntBASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 AC025281.1-201ENST00000567026 265 ntBASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 AC008088.1-201ENST00000580993 280 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms