Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
PCDHB11Q9Y5F2 RNU6-740P-201ENST00000364734 105 ntBASIC5.15□□□□□ -1.59
PCDHB11Q9Y5F2 Y_RNA.292-201ENST00000364904 97 ntBASIC5.15□□□□□ -1.59
PCDHB11Q9Y5F2 OR1L6-202ENST00000373684 1044 ntBASIC5.15□□□□□ -1.59
PCDHB11Q9Y5F2 MIR105-1-201ENST00000385222 81 ntBASIC5.15□□□□□ -1.59
PCDHB11Q9Y5F2 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PCDHB11Q9Y5F2 RPL19P16-201ENST00000433839 588 ntBASIC5.15□□□□□ -1.59
PCDHB11Q9Y5F2 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC5.15□□□□□ -1.59
PCDHB11Q9Y5F2 AC005002.2-201ENST00000438228 269 ntBASIC5.15□□□□□ -1.59
PCDHB11Q9Y5F2 AL078601.1-201ENST00000444542 271 ntBASIC5.15□□□□□ -1.59
PCDHB11Q9Y5F2 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.15□□□□□ -1.59
PCDHB11Q9Y5F2 AC092798.1-201ENST00000458542 409 ntBASIC5.15□□□□□ -1.59
PCDHB11Q9Y5F2 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC5.15□□□□□ -1.59
PCDHB11Q9Y5F2 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC5.15□□□□□ -1.59
PCDHB11Q9Y5F2 RNU2-31P-201ENST00000516954 155 ntBASIC5.15□□□□□ -1.59
PCDHB11Q9Y5F2 RNA5SP230-201ENST00000517039 122 ntBASIC5.15□□□□□ -1.59
PCDHB11Q9Y5F2 AC022559.1-201ENST00000520905 205 ntBASIC5.15□□□□□ -1.59
PCDHB11Q9Y5F2 RPL10P14-201ENST00000565265 298 ntBASIC5.15□□□□□ -1.59
PCDHB11Q9Y5F2 MIR3921-201ENST00000577308 85 ntBASIC5.15□□□□□ -1.59
PCDHB11Q9Y5F2 MIR4458-201ENST00000578872 75 ntBASIC5.15□□□□□ -1.59
PCDHB11Q9Y5F2 MIR3934-201ENST00000579806 107 ntBASIC5.15□□□□□ -1.59
PCDHB11Q9Y5F2 AC037487.3-201ENST00000606668 112 ntBASIC5.15□□□□□ -1.59
PCDHB11Q9Y5F2 AC004832.4-201ENST00000608952 331 ntBASIC5.15□□□□□ -1.59
PCDHB11Q9Y5F2 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PCDHB11Q9Y5F2 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.15□□□□□ -1.59
PCDHB11Q9Y5F2 ZNF826P-207ENST00000622273 1910 ntBASIC5.15□□□□□ -1.59
PCDHB11Q9Y5F2 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PCDHB11Q9Y5F2 AL031595.2-201ENST00000624215 19071 ntBASIC5.15□□□□□ -1.59
PCDHB11Q9Y5F2 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
PCDHB11Q9Y5F2 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 AC083843.3-201ENST00000623679 2186 ntBASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 RNU6-858P-201ENST00000362436 107 ntBASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 RNU6-78P-201ENST00000362897 107 ntBASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 RNU6-704P-201ENST00000364162 103 ntBASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 RN7SKP153-201ENST00000365026 316 ntBASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 RNU6-17P-201ENST00000384245 107 ntBASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 RNU1-106P-201ENST00000384382 164 ntBASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 RNU6-18P-201ENST00000384527 107 ntBASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 RNU6ATAC15P-201ENST00000408279 121 ntBASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 AL451074.5-201ENST00000415894 435 ntBASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 NDUFB4P7-201ENST00000423198 363 ntBASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 IFNWP4-201ENST00000453148 294 ntBASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 AC139453.3-201ENST00000493276 369 ntBASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 Y_RNA.662-201ENST00000516028 97 ntBASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 RNU6-572P-201ENST00000516724 80 ntBASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 IGKV2-38-201ENST00000517443 247 ntBASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 MIR4660-201ENST00000583549 74 ntBASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 AC093799.2-201ENST00000610062 578 ntBASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 AC006065.5-201ENST00000623427 349 ntBASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.14□□□□□ -1.59
PCDHB11Q9Y5F2 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
PCDHB11Q9Y5F2 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHB11Q9Y5F2 MAPK10-263ENST00000641052 4307 ntBASIC5.13□□□□□ -1.59
PCDHB11Q9Y5F2 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.13□□□□□ -1.59
PCDHB11Q9Y5F2 MAPK10-328ENST00000641553 4009 ntBASIC5.13□□□□□ -1.59
PCDHB11Q9Y5F2 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHB11Q9Y5F2 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.13□□□□□ -1.59
PCDHB11Q9Y5F2 SNORD50.2-201ENST00000365465 70 ntBASIC5.13□□□□□ -1.59
PCDHB11Q9Y5F2 RNU6-318P-201ENST00000384283 103 ntBASIC5.13□□□□□ -1.59
PCDHB11Q9Y5F2 RN7SKP114-201ENST00000410327 279 ntBASIC5.13□□□□□ -1.59
PCDHB11Q9Y5F2 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC5.13□□□□□ -1.59
PCDHB11Q9Y5F2 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDHB11Q9Y5F2 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDHB11Q9Y5F2 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC5.13□□□□□ -1.59
PCDHB11Q9Y5F2 AC009296.1-201ENST00000443146 155 ntBASIC5.13□□□□□ -1.59
PCDHB11Q9Y5F2 AC016700.2-201ENST00000446011 156 ntBASIC5.13□□□□□ -1.59
PCDHB11Q9Y5F2 ANP32BP2-201ENST00000454525 545 ntBASIC5.13□□□□□ -1.59
PCDHB11Q9Y5F2 RPL21P104-201ENST00000464143 478 ntBASIC5.13□□□□□ -1.59
PCDHB11Q9Y5F2 HMGB3P16-201ENST00000508037 287 ntBASIC5.13□□□□□ -1.59
PCDHB11Q9Y5F2 AC004980.4-201ENST00000513375 203 ntBASIC5.13□□□□□ -1.59
PCDHB11Q9Y5F2 RN7SKP272-201ENST00000516988 232 ntBASIC5.13□□□□□ -1.59
PCDHB11Q9Y5F2 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDHB11Q9Y5F2 AC024940.3-201ENST00000538551 316 ntBASIC5.13□□□□□ -1.59
PCDHB11Q9Y5F2 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDHB11Q9Y5F2 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms