Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 RNU1-48P-201ENST00000516400 162 ntBASIC0.98□□□□□ -2.25
AP4S1Q9Y587 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.98□□□□□ -2.25
AP4S1Q9Y587 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC0.98□□□□□ -2.25
AP4S1Q9Y587 AL391261.3-201ENST00000557194 520 ntBASIC0.98□□□□□ -2.25
AP4S1Q9Y587 MIR4303-201ENST00000581299 66 ntBASIC0.98□□□□□ -2.25
AP4S1Q9Y587 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC0.98□□□□□ -2.25
AP4S1Q9Y587 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.98□□□□□ -2.25
AP4S1Q9Y587 AC069294.1-201ENST00000608397 350 ntBASIC0.98□□□□□ -2.25
AP4S1Q9Y587 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC0.98□□□□□ -2.25
AP4S1Q9Y587 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC0.98□□□□□ -2.25
AP4S1Q9Y587 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
AP4S1Q9Y587 AP000776.1-201ENST00000530032 1663 ntBASIC0.97□□□□□ -2.25
AP4S1Q9Y587 RNU6-1155P-201ENST00000363554 107 ntBASIC0.97□□□□□ -2.25
AP4S1Q9Y587 RNU6-516P-201ENST00000411381 104 ntBASIC0.97□□□□□ -2.25
AP4S1Q9Y587 PIGPP2-201ENST00000411569 458 ntBASIC0.97□□□□□ -2.25
AP4S1Q9Y587 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC0.97□□□□□ -2.25
AP4S1Q9Y587 AC092047.1-201ENST00000424997 240 ntBASIC0.97□□□□□ -2.25
AP4S1Q9Y587 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.97□□□□□ -2.25
AP4S1Q9Y587 AC012497.1-201ENST00000429392 575 ntBASIC0.97□□□□□ -2.25
AP4S1Q9Y587 APOA2-205ENST00000468465 421 ntTSL 2 BASIC0.97□□□□□ -2.25
AP4S1Q9Y587 RPL30P12-201ENST00000474666 353 ntBASIC0.97□□□□□ -2.25
AP4S1Q9Y587 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.97□□□□□ -2.25
AP4S1Q9Y587 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC0.97□□□□□ -2.25
AP4S1Q9Y587 AC074051.3-201ENST00000570238 358 ntBASIC0.97□□□□□ -2.25
AP4S1Q9Y587 MIR4421-201ENST00000578133 69 ntBASIC0.97□□□□□ -2.25
AP4S1Q9Y587 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC0.97□□□□□ -2.25
AP4S1Q9Y587 AL031274.2-201ENST00000599419 203 ntBASIC0.97□□□□□ -2.25
AP4S1Q9Y587 AP003973.1-201ENST00000604639 691 ntBASIC0.97□□□□□ -2.25
AP4S1Q9Y587 SNORD114-21-201ENST00000606412 72 ntBASIC0.97□□□□□ -2.25
AP4S1Q9Y587 AC092140.2-201ENST00000618027 521 ntBASIC0.97□□□□□ -2.25
AP4S1Q9Y587 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
AP4S1Q9Y587 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
AP4S1Q9Y587 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
AP4S1Q9Y587 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.97□□□□□ -2.25
AP4S1Q9Y587 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
AP4S1Q9Y587 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
AP4S1Q9Y587 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
AP4S1Q9Y587 RNU2-49P-201ENST00000410666 184 ntBASIC0.96□□□□□ -2.26
AP4S1Q9Y587 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC0.96□□□□□ -2.26
AP4S1Q9Y587 AL121882.1-201ENST00000422893 417 ntBASIC0.96□□□□□ -2.26
AP4S1Q9Y587 AL512844.2-201ENST00000433990 593 ntBASIC0.96□□□□□ -2.26
AP4S1Q9Y587 AL022238.1-201ENST00000442557 355 ntBASIC0.96□□□□□ -2.26
AP4S1Q9Y587 GDI2P2-201ENST00000445131 608 ntBASIC0.96□□□□□ -2.26
AP4S1Q9Y587 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.96□□□□□ -2.26
AP4S1Q9Y587 AC114786.4-201ENST00000508771 728 ntBASIC0.96□□□□□ -2.26
AP4S1Q9Y587 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC0.96□□□□□ -2.26
AP4S1Q9Y587 AC114797.1-201ENST00000514003 728 ntBASIC0.96□□□□□ -2.26
AP4S1Q9Y587 AC119751.5-201ENST00000514077 770 ntBASIC0.96□□□□□ -2.26
AP4S1Q9Y587 RNU6-1095P-201ENST00000516148 108 ntBASIC0.96□□□□□ -2.26
AP4S1Q9Y587 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC0.96□□□□□ -2.26
AP4S1Q9Y587 HAUS1P3-201ENST00000523909 662 ntBASIC0.96□□□□□ -2.26
AP4S1Q9Y587 AC025857.1-201ENST00000525252 377 ntBASIC0.96□□□□□ -2.26
AP4S1Q9Y587 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC0.96□□□□□ -2.26
AP4S1Q9Y587 AP001269.3-201ENST00000588718 329 ntBASIC0.96□□□□□ -2.26
AP4S1Q9Y587 uc_338.12-201ENST00000616344 181 ntBASIC0.96□□□□□ -2.26
AP4S1Q9Y587 FRG1HP-204ENST00000617940 757 ntBASIC0.96□□□□□ -2.26
AP4S1Q9Y587 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.96□□□□□ -2.26
AP4S1Q9Y587 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
AP4S1Q9Y587 RNU6-167P-201ENST00000384292 106 ntBASIC0.95□□□□□ -2.26
AP4S1Q9Y587 MIR518A2-201ENST00000384966 87 ntBASIC0.95□□□□□ -2.26
AP4S1Q9Y587 NPM1P10-201ENST00000398310 865 ntBASIC0.95□□□□□ -2.26
AP4S1Q9Y587 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.95□□□□□ -2.26
AP4S1Q9Y587 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC0.95□□□□□ -2.26
AP4S1Q9Y587 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
AP4S1Q9Y587 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.95□□□□□ -2.26
AP4S1Q9Y587 HMGB1P27-201ENST00000431429 603 ntBASIC0.95□□□□□ -2.26
AP4S1Q9Y587 MTND4LP10-201ENST00000435146 291 ntBASIC0.95□□□□□ -2.26
AP4S1Q9Y587 RPL7P29-201ENST00000437151 728 ntBASIC0.95□□□□□ -2.26
AP4S1Q9Y587 AC004865.1-201ENST00000442276 1003 ntBASIC0.95□□□□□ -2.26
AP4S1Q9Y587 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.95□□□□□ -2.26
AP4S1Q9Y587 MRPL35P4-201ENST00000453682 566 ntBASIC0.95□□□□□ -2.26
AP4S1Q9Y587 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC0.95□□□□□ -2.26
AP4S1Q9Y587 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.95□□□□□ -2.26
AP4S1Q9Y587 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
AP4S1Q9Y587 AC113398.2-201ENST00000507630 558 ntBASIC0.95□□□□□ -2.26
AP4S1Q9Y587 AC098591.2-201ENST00000510152 315 ntBASIC0.95□□□□□ -2.26
AP4S1Q9Y587 AL359273.1-201ENST00000510918 627 ntBASIC0.95□□□□□ -2.26
AP4S1Q9Y587 DUXAP5-201ENST00000529668 529 ntBASIC0.95□□□□□ -2.26
AP4S1Q9Y587 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC0.95□□□□□ -2.26
AP4S1Q9Y587 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC0.95□□□□□ -2.26
AP4S1Q9Y587 AP001542.2-201ENST00000593141 364 ntBASIC0.95□□□□□ -2.26
AP4S1Q9Y587 AF131215.7-201ENST00000602443 707 ntBASIC0.95□□□□□ -2.26
AP4S1Q9Y587 AL589743.7-201ENST00000612637 233 ntBASIC0.95□□□□□ -2.26
AP4S1Q9Y587 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC0.95□□□□□ -2.26
AP4S1Q9Y587 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.95□□□□□ -2.26
AP4S1Q9Y587 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC0.95□□□□□ -2.26
AP4S1Q9Y587 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
AP4S1Q9Y587 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.94□□□□□ -2.26
AP4S1Q9Y587 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.94□□□□□ -2.26
AP4S1Q9Y587 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
AP4S1Q9Y587 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.94□□□□□ -2.26
AP4S1Q9Y587 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC0.94□□□□□ -2.26
AP4S1Q9Y587 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.94□□□□□ -2.26
AP4S1Q9Y587 TAAR7P-201ENST00000436141 242 ntBASIC0.94□□□□□ -2.26
AP4S1Q9Y587 RPL32P28-201ENST00000443577 397 ntBASIC0.94□□□□□ -2.26
AP4S1Q9Y587 RPL39P29-201ENST00000447779 157 ntBASIC0.94□□□□□ -2.26
AP4S1Q9Y587 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.94□□□□□ -2.26
AP4S1Q9Y587 AC099513.1-201ENST00000490423 301 ntBASIC0.94□□□□□ -2.26
AP4S1Q9Y587 AC117522.2-201ENST00000510049 657 ntBASIC0.94□□□□□ -2.26
AP4S1Q9Y587 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms