Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 RPS15AP10-201ENST00000432472 382 ntBASIC5.38□□□□□ -1.55
RTCBQ9Y3I0 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.38□□□□□ -1.55
RTCBQ9Y3I0 RPL9P32-201ENST00000464118 620 ntBASIC5.38□□□□□ -1.55
RTCBQ9Y3I0 RPL31P60-201ENST00000478450 367 ntBASIC5.38□□□□□ -1.55
RTCBQ9Y3I0 AP000926.1-201ENST00000479573 241 ntBASIC5.38□□□□□ -1.55
RTCBQ9Y3I0 RN7SKP60-201ENST00000516985 239 ntBASIC5.38□□□□□ -1.55
RTCBQ9Y3I0 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RTCBQ9Y3I0 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC5.38□□□□□ -1.55
RTCBQ9Y3I0 AC067852.3-201ENST00000589177 561 ntBASIC5.38□□□□□ -1.55
RTCBQ9Y3I0 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.38□□□□□ -1.55
RTCBQ9Y3I0 AC012119.1-201ENST00000603184 222 ntBASIC5.38□□□□□ -1.55
RTCBQ9Y3I0 AC016727.2-201ENST00000603988 621 ntBASIC5.38□□□□□ -1.55
RTCBQ9Y3I0 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.38□□□□□ -1.55
RTCBQ9Y3I0 AL596275.2-204ENST00000641628 552 ntBASIC5.38□□□□□ -1.55
RTCBQ9Y3I0 AL596275.2-206ENST00000641957 626 ntBASIC5.38□□□□□ -1.55
RTCBQ9Y3I0 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
RTCBQ9Y3I0 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
RTCBQ9Y3I0 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
RTCBQ9Y3I0 PABPC1P7-201ENST00000413177 1513 ntBASIC5.38□□□□□ -1.55
RTCBQ9Y3I0 AC016588.2-201ENST00000632484 3021 ntBASIC5.37□□□□□ -1.55
RTCBQ9Y3I0 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
RTCBQ9Y3I0 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RTCBQ9Y3I0 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RTCBQ9Y3I0 AC107027.3-201ENST00000565095 3473 ntBASIC5.37□□□□□ -1.55
RTCBQ9Y3I0 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.37□□□□□ -1.55
RTCBQ9Y3I0 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RTCBQ9Y3I0 AL592291.1-201ENST00000403830 352 ntBASIC5.37□□□□□ -1.55
RTCBQ9Y3I0 CYCSP10-201ENST00000417973 294 ntBASIC5.37□□□□□ -1.55
RTCBQ9Y3I0 AC008065.1-201ENST00000428525 348 ntBASIC5.37□□□□□ -1.55
RTCBQ9Y3I0 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.37□□□□□ -1.55
RTCBQ9Y3I0 RPL23AP46-201ENST00000438548 490 ntBASIC5.37□□□□□ -1.55
RTCBQ9Y3I0 AL589765.3-201ENST00000446084 462 ntBASIC5.37□□□□□ -1.55
RTCBQ9Y3I0 AC008571.1-201ENST00000467232 300 ntBASIC5.37□□□□□ -1.55
RTCBQ9Y3I0 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC5.37□□□□□ -1.55
RTCBQ9Y3I0 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC5.37□□□□□ -1.55
RTCBQ9Y3I0 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.37□□□□□ -1.55
RTCBQ9Y3I0 AC007619.2-201ENST00000605743 379 ntBASIC5.37□□□□□ -1.55
RTCBQ9Y3I0 HMGN2P28-201ENST00000606102 262 ntBASIC5.37□□□□□ -1.55
RTCBQ9Y3I0 AC007546.2-201ENST00000623996 360 ntBASIC5.37□□□□□ -1.55
RTCBQ9Y3I0 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.37□□□□□ -1.55
RTCBQ9Y3I0 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.37□□□□□ -1.55
RTCBQ9Y3I0 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
RTCBQ9Y3I0 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.37□□□□□ -1.55
RTCBQ9Y3I0 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.37□□□□□ -1.55
RTCBQ9Y3I0 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RTCBQ9Y3I0 AL161912.2-201ENST00000565707 3007 ntBASIC5.37□□□□□ -1.55
RTCBQ9Y3I0 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RTCBQ9Y3I0 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.36□□□□□ -1.55
RTCBQ9Y3I0 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RTCBQ9Y3I0 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.36□□□□□ -1.55
RTCBQ9Y3I0 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.36□□□□□ -1.55
RTCBQ9Y3I0 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.36□□□□□ -1.55
RTCBQ9Y3I0 AC138393.1-203ENST00000327086 343 ntBASIC5.36□□□□□ -1.55
RTCBQ9Y3I0 Y_RNA.314-201ENST00000365114 102 ntBASIC5.36□□□□□ -1.55
RTCBQ9Y3I0 SNORA23-201ENST00000365128 182 ntBASIC5.36□□□□□ -1.55
RTCBQ9Y3I0 RNA5SP151-201ENST00000365632 117 ntBASIC5.36□□□□□ -1.55
RTCBQ9Y3I0 Y_RNA.480-201ENST00000384364 102 ntBASIC5.36□□□□□ -1.55
RTCBQ9Y3I0 RNU4-61P-201ENST00000411243 107 ntBASIC5.36□□□□□ -1.55
RTCBQ9Y3I0 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC5.36□□□□□ -1.55
RTCBQ9Y3I0 ARL5AP4-201ENST00000430731 512 ntBASIC5.36□□□□□ -1.55
RTCBQ9Y3I0 RPL21P2-201ENST00000440049 481 ntBASIC5.36□□□□□ -1.55
RTCBQ9Y3I0 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.36□□□□□ -1.55
RTCBQ9Y3I0 PRSS3P4-201ENST00000453323 162 ntBASIC5.36□□□□□ -1.55
RTCBQ9Y3I0 RNU7-187P-201ENST00000458985 68 ntBASIC5.36□□□□□ -1.55
RTCBQ9Y3I0 RNU7-138P-201ENST00000459479 64 ntBASIC5.36□□□□□ -1.55
RTCBQ9Y3I0 RPL37P6-201ENST00000460682 294 ntBASIC5.36□□□□□ -1.55
RTCBQ9Y3I0 HIGD1AP3-201ENST00000515857 278 ntBASIC5.36□□□□□ -1.55
RTCBQ9Y3I0 RNA5SP446-201ENST00000515955 82 ntBASIC5.36□□□□□ -1.55
RTCBQ9Y3I0 AC007991.1-201ENST00000522680 631 ntBASIC5.36□□□□□ -1.55
RTCBQ9Y3I0 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.36□□□□□ -1.55
RTCBQ9Y3I0 AC109446.1-201ENST00000566172 220 ntBASIC5.36□□□□□ -1.55
RTCBQ9Y3I0 SNORA51-201ENST00000606420 132 ntBASIC5.36□□□□□ -1.55
RTCBQ9Y3I0 AC002044.1-201ENST00000606707 158 ntBASIC5.36□□□□□ -1.55
RTCBQ9Y3I0 AL138825.1-201ENST00000618587 192 ntBASIC5.36□□□□□ -1.55
RTCBQ9Y3I0 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
RTCBQ9Y3I0 MIR4496-201ENST00000635896 61 ntBASIC5.36□□□□□ -1.55
RTCBQ9Y3I0 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.36□□□□□ -1.55
RTCBQ9Y3I0 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
RTCBQ9Y3I0 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
RTCBQ9Y3I0 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.36□□□□□ -1.55
RTCBQ9Y3I0 AC093591.2-201ENST00000565254 3843 ntBASIC5.36□□□□□ -1.55
RTCBQ9Y3I0 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
RTCBQ9Y3I0 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
RTCBQ9Y3I0 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
RTCBQ9Y3I0 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RTCBQ9Y3I0 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.35□□□□□ -1.55
RTCBQ9Y3I0 PCAT14-202ENST00000627127 3935 ntBASIC5.35□□□□□ -1.55
RTCBQ9Y3I0 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RTCBQ9Y3I0 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.35□□□□□ -1.55
RTCBQ9Y3I0 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RTCBQ9Y3I0 SAGE2P-201ENST00000420011 2126 ntBASIC5.35□□□□□ -1.55
RTCBQ9Y3I0 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.35□□□□□ -1.55
RTCBQ9Y3I0 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RTCBQ9Y3I0 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.35□□□□□ -1.55
RTCBQ9Y3I0 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RTCBQ9Y3I0 RNA5SP124-201ENST00000362739 110 ntBASIC5.35□□□□□ -1.55
RTCBQ9Y3I0 RNU6-209P-201ENST00000384118 107 ntBASIC5.35□□□□□ -1.55
RTCBQ9Y3I0 MIR517A-201ENST00000385001 87 ntBASIC5.35□□□□□ -1.55
RTCBQ9Y3I0 PGBD4P6-201ENST00000421501 610 ntBASIC5.35□□□□□ -1.55
RTCBQ9Y3I0 AL160275.3-201ENST00000423876 471 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms