Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 NCAPGP2-201ENST00000557911 754 ntBASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 MIR5195-201ENST00000583555 115 ntBASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 MIR4719-201ENST00000585233 84 ntBASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 AC018638.8-201ENST00000588755 281 ntBASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 AC011712.1-201ENST00000588959 234 ntBASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 AC006116.10-201ENST00000591836 581 ntBASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 AC099778.2-201ENST00000610904 211 ntBASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 SNHG22-203ENST00000617833 660 ntBASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 uc_338.11-201ENST00000619132 160 ntBASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 AC079684.1-201ENST00000621405 437 ntBASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 RIOK3P1-201ENST00000418778 1528 ntBASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 AL365440.1-201ENST00000436135 2167 ntBASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
SSX2IPQ9Y2D8 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SSX2IPQ9Y2D8 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.92□□□□□ -1.78
SSX2IPQ9Y2D8 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SSX2IPQ9Y2D8 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SSX2IPQ9Y2D8 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SSX2IPQ9Y2D8 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.92□□□□□ -1.78
SSX2IPQ9Y2D8 RNU6-960P-201ENST00000364056 120 ntBASIC3.92□□□□□ -1.78
SSX2IPQ9Y2D8 MT-TD-201ENST00000387419 68 ntBASIC3.92□□□□□ -1.78
SSX2IPQ9Y2D8 HLFP1-201ENST00000402375 499 ntBASIC3.92□□□□□ -1.78
SSX2IPQ9Y2D8 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.92□□□□□ -1.78
SSX2IPQ9Y2D8 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.92□□□□□ -1.78
SSX2IPQ9Y2D8 RPL36AP53-201ENST00000432891 316 ntBASIC3.92□□□□□ -1.78
SSX2IPQ9Y2D8 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.92□□□□□ -1.78
SSX2IPQ9Y2D8 MTCO3P45-201ENST00000443036 613 ntBASIC3.92□□□□□ -1.78
SSX2IPQ9Y2D8 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.92□□□□□ -1.78
SSX2IPQ9Y2D8 AC073415.1-201ENST00000449240 153 ntBASIC3.92□□□□□ -1.78
SSX2IPQ9Y2D8 ELOCP23-201ENST00000452014 332 ntBASIC3.92□□□□□ -1.78
SSX2IPQ9Y2D8 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.92□□□□□ -1.78
SSX2IPQ9Y2D8 SCARNA13-201ENST00000516672 275 ntBASIC3.92□□□□□ -1.78
SSX2IPQ9Y2D8 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.92□□□□□ -1.78
SSX2IPQ9Y2D8 AC103843.2-201ENST00000530523 682 ntBASIC3.92□□□□□ -1.78
SSX2IPQ9Y2D8 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.92□□□□□ -1.78
SSX2IPQ9Y2D8 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.92□□□□□ -1.78
SSX2IPQ9Y2D8 AC090877.1-201ENST00000561418 344 ntBASIC3.92□□□□□ -1.78
SSX2IPQ9Y2D8 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.92□□□□□ -1.78
SSX2IPQ9Y2D8 MIR4775-201ENST00000581168 75 ntBASIC3.92□□□□□ -1.78
SSX2IPQ9Y2D8 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.92□□□□□ -1.78
SSX2IPQ9Y2D8 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.92□□□□□ -1.78
SSX2IPQ9Y2D8 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.92□□□□□ -1.78
SSX2IPQ9Y2D8 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.92□□□□□ -1.78
SSX2IPQ9Y2D8 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.92□□□□□ -1.78
SSX2IPQ9Y2D8 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.92□□□□□ -1.78
SSX2IPQ9Y2D8 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.92□□□□□ -1.78
SSX2IPQ9Y2D8 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
SSX2IPQ9Y2D8 AC005183.1-201ENST00000603687 1979 ntBASIC3.92□□□□□ -1.78
SSX2IPQ9Y2D8 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
SSX2IPQ9Y2D8 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.92□□□□□ -1.78
SSX2IPQ9Y2D8 CEP170P1-201ENST00000502249 4587 ntBASIC3.92□□□□□ -1.78
SSX2IPQ9Y2D8 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 MTND4P29-201ENST00000503122 1372 ntBASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 RNU6-179P-201ENST00000363350 107 ntBASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 RNU6-767P-201ENST00000384132 107 ntBASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 HSPE1P26-201ENST00000405341 275 ntBASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 RNU2-43P-201ENST00000410306 190 ntBASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 BX842559.1-201ENST00000419615 532 ntBASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 AL158156.1-201ENST00000422509 473 ntBASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 CBWD4P-201ENST00000445695 655 ntBASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 UBE2V1P7-201ENST00000446395 340 ntBASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 AC008481.1-201ENST00000463278 396 ntBASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 MRPS17P3-201ENST00000465453 385 ntBASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 RPL23AP14-201ENST00000468281 468 ntBASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 AC078918.1-201ENST00000498515 228 ntBASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 AC026784.1-201ENST00000507986 352 ntBASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 RN7SKP13-201ENST00000515933 244 ntBASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 RNU6-1092P-201ENST00000516955 87 ntBASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 SUMO2P20-201ENST00000520803 283 ntBASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 AC005261.5-201ENST00000596280 355 ntBASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 C8orf59P2-201ENST00000603441 271 ntBASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 AL670379.6-201ENST00000603753 252 ntBASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 AL670379.11-201ENST00000604059 253 ntBASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 AC008162.1-201ENST00000604718 254 ntBASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 AL670379.1-201ENST00000604752 252 ntBASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 AL670379.5-201ENST00000605253 252 ntBASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 AL670379.12-201ENST00000605291 253 ntBASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 AL160281.1-201ENST00000605307 311 ntBASIC3.91□□□□□ -1.78
SSX2IPQ9Y2D8 AL670379.8-201ENST00000605353 252 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms