Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 RPL23AP3-201ENST00000453844 468 ntBASIC1.25□□□□□ -2.21
SCN11AQ9UI33 AC040174.2-201ENST00000602701 465 ntBASIC1.25□□□□□ -2.21
SCN11AQ9UI33 AC139769.3-201ENST00000618383 175 ntBASIC1.25□□□□□ -2.21
SCN11AQ9UI33 AL137003.2-201ENST00000606924 2538 ntBASIC1.25□□□□□ -2.21
SCN11AQ9UI33 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.25□□□□□ -2.21
SCN11AQ9UI33 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
SCN11AQ9UI33 RNA5SP457-201ENST00000363657 124 ntBASIC1.24□□□□□ -2.21
SCN11AQ9UI33 RNU6-19P-201ENST00000384718 107 ntBASIC1.24□□□□□ -2.21
SCN11AQ9UI33 RNU11-5P-201ENST00000391216 129 ntBASIC1.24□□□□□ -2.21
SCN11AQ9UI33 RNA5SP450-201ENST00000411206 102 ntBASIC1.24□□□□□ -2.21
SCN11AQ9UI33 AL356320.2-201ENST00000417263 507 ntBASIC1.24□□□□□ -2.21
SCN11AQ9UI33 OR51AB1P-201ENST00000429046 620 ntBASIC1.24□□□□□ -2.21
SCN11AQ9UI33 AC004383.1-201ENST00000438135 289 ntBASIC1.24□□□□□ -2.21
SCN11AQ9UI33 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.24□□□□□ -2.21
SCN11AQ9UI33 TPMTP4-201ENST00000450749 678 ntBASIC1.24□□□□□ -2.21
SCN11AQ9UI33 SYPL1P1-201ENST00000473622 768 ntBASIC1.24□□□□□ -2.21
SCN11AQ9UI33 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC1.24□□□□□ -2.21
SCN11AQ9UI33 AC008269.2-201ENST00000561915 1105 ntBASIC1.24□□□□□ -2.21
SCN11AQ9UI33 DPRXP5-201ENST00000604662 539 ntBASIC1.24□□□□□ -2.21
SCN11AQ9UI33 AC096586.2-201ENST00000610260 441 ntBASIC1.24□□□□□ -2.21
SCN11AQ9UI33 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
SCN11AQ9UI33 AC010889.1-201ENST00000566193 2666 ntBASIC1.24□□□□□ -2.21
SCN11AQ9UI33 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
SCN11AQ9UI33 MIR193B-201ENST00000384907 83 ntBASIC1.24□□□□□ -2.21
SCN11AQ9UI33 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC1.24□□□□□ -2.21
SCN11AQ9UI33 RNU6-928P-201ENST00000516876 104 ntBASIC1.24□□□□□ -2.21
SCN11AQ9UI33 HSPE1P4-201ENST00000550617 308 ntBASIC1.24□□□□□ -2.21
SCN11AQ9UI33 MIR1273G-201ENST00000577677 100 ntBASIC1.24□□□□□ -2.21
SCN11AQ9UI33 MIR3973-201ENST00000579824 107 ntBASIC1.24□□□□□ -2.21
SCN11AQ9UI33 OR1M4P-201ENST00000589199 287 ntBASIC1.24□□□□□ -2.21
SCN11AQ9UI33 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.24□□□□□ -2.21
SCN11AQ9UI33 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.23□□□□□ -2.21
SCN11AQ9UI33 AC025263.3-201ENST00000622965 1396 ntBASIC1.23□□□□□ -2.21
SCN11AQ9UI33 RBBP8P1-201ENST00000449447 1844 ntBASIC1.23□□□□□ -2.21
SCN11AQ9UI33 Y_RNA.115-201ENST00000363272 98 ntBASIC1.23□□□□□ -2.21
SCN11AQ9UI33 AC098592.2-201ENST00000413158 265 ntBASIC1.23□□□□□ -2.21
SCN11AQ9UI33 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.23□□□□□ -2.21
SCN11AQ9UI33 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.23□□□□□ -2.21
SCN11AQ9UI33 RPL30P4-201ENST00000429309 333 ntBASIC1.23□□□□□ -2.21
SCN11AQ9UI33 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
SCN11AQ9UI33 AL691517.1-201ENST00000440833 1235 ntBASIC1.23□□□□□ -2.21
SCN11AQ9UI33 PABPC1P3-201ENST00000469174 459 ntBASIC1.23□□□□□ -2.21
SCN11AQ9UI33 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.23□□□□□ -2.21
SCN11AQ9UI33 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.23□□□□□ -2.21
SCN11AQ9UI33 NDUFB4P2-201ENST00000509515 391 ntBASIC1.23□□□□□ -2.21
SCN11AQ9UI33 RN7SKP179-201ENST00000516126 217 ntBASIC1.23□□□□□ -2.21
SCN11AQ9UI33 RNA5SP330-201ENST00000517096 96 ntBASIC1.23□□□□□ -2.21
SCN11AQ9UI33 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.23□□□□□ -2.21
SCN11AQ9UI33 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.23□□□□□ -2.21
SCN11AQ9UI33 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.23□□□□□ -2.21
SCN11AQ9UI33 SNORD14A-201ENST00000606526 91 ntBASIC1.23□□□□□ -2.21
SCN11AQ9UI33 AC091304.6-201ENST00000619761 202 ntBASIC1.23□□□□□ -2.21
SCN11AQ9UI33 AL356432.1-201ENST00000405809 419 ntBASIC1.22□□□□□ -2.21
SCN11AQ9UI33 VN1R36P-201ENST00000414936 291 ntBASIC1.22□□□□□ -2.21
SCN11AQ9UI33 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.22□□□□□ -2.21
SCN11AQ9UI33 SDAD1P3-201ENST00000427380 333 ntBASIC1.22□□□□□ -2.21
SCN11AQ9UI33 AL591212.2-201ENST00000433923 257 ntBASIC1.22□□□□□ -2.21
SCN11AQ9UI33 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.22□□□□□ -2.21
SCN11AQ9UI33 NEFMP1-201ENST00000443423 1006 ntBASIC1.22□□□□□ -2.21
SCN11AQ9UI33 AC004022.1-201ENST00000447766 1066 ntBASIC1.22□□□□□ -2.21
SCN11AQ9UI33 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.22□□□□□ -2.21
SCN11AQ9UI33 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.22□□□□□ -2.21
SCN11AQ9UI33 MTCYBP23-201ENST00000558717 1102 ntBASIC1.22□□□□□ -2.21
SCN11AQ9UI33 AL355812.1-201ENST00000603215 216 ntBASIC1.22□□□□□ -2.21
SCN11AQ9UI33 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.22□□□□□ -2.21
SCN11AQ9UI33 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC1.21□□□□□ -2.22
SCN11AQ9UI33 AC092648.1-201ENST00000425870 423 ntBASIC1.21□□□□□ -2.22
SCN11AQ9UI33 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.21□□□□□ -2.22
SCN11AQ9UI33 SNORD97-201ENST00000459187 142 ntBASIC1.21□□□□□ -2.22
SCN11AQ9UI33 TRBV8-1-201ENST00000481590 279 ntBASIC1.21□□□□□ -2.22
SCN11AQ9UI33 RNU7-193P-201ENST00000516723 65 ntBASIC1.21□□□□□ -2.22
SCN11AQ9UI33 CBX3P8-201ENST00000532412 525 ntBASIC1.21□□□□□ -2.22
SCN11AQ9UI33 CBX3P7-201ENST00000532876 502 ntBASIC1.21□□□□□ -2.22
SCN11AQ9UI33 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.21□□□□□ -2.22
SCN11AQ9UI33 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.21□□□□□ -2.22
SCN11AQ9UI33 AC211469.2-201ENST00000605461 205 ntBASIC1.21□□□□□ -2.22
SCN11AQ9UI33 AC095031.1-201ENST00000623685 672 ntBASIC1.21□□□□□ -2.22
SCN11AQ9UI33 AC022513.1-201ENST00000624512 117 ntBASIC1.21□□□□□ -2.22
SCN11AQ9UI33 AL442644.1-201ENST00000454390 3105 ntBASIC1.21□□□□□ -2.22
SCN11AQ9UI33 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.21□□□□□ -2.22
SCN11AQ9UI33 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.21□□□□□ -2.22
SCN11AQ9UI33 MIR126-201ENST00000362291 85 ntBASIC1.21□□□□□ -2.22
SCN11AQ9UI33 SNORD114-23-201ENST00000363536 72 ntBASIC1.21□□□□□ -2.22
SCN11AQ9UI33 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.21□□□□□ -2.22
SCN11AQ9UI33 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.21□□□□□ -2.22
SCN11AQ9UI33 RNU7-27P-201ENST00000459281 62 ntBASIC1.21□□□□□ -2.22
SCN11AQ9UI33 NAP1L1P3-201ENST00000462291 880 ntBASIC1.21□□□□□ -2.22
SCN11AQ9UI33 AP001960.1-201ENST00000506494 658 ntBASIC1.21□□□□□ -2.22
SCN11AQ9UI33 MRPS33P3-201ENST00000513456 322 ntBASIC1.21□□□□□ -2.22
SCN11AQ9UI33 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.21□□□□□ -2.22
SCN11AQ9UI33 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.21□□□□□ -2.22
SCN11AQ9UI33 FAM71BP1-201ENST00000604431 523 ntBASIC1.21□□□□□ -2.22
SCN11AQ9UI33 AC003001.2-201ENST00000616294 831 ntBASIC1.21□□□□□ -2.22
SCN11AQ9UI33 UCA1.1-201ENST00000620952 75 ntBASIC1.21□□□□□ -2.22
SCN11AQ9UI33 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
SCN11AQ9UI33 AC008669.1-201ENST00000565823 2178 ntBASIC1.2□□□□□ -2.22
SCN11AQ9UI33 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
SCN11AQ9UI33 Y_RNA.68-201ENST00000362881 102 ntBASIC1.2□□□□□ -2.22
SCN11AQ9UI33 AL513475.1-201ENST00000406602 315 ntBASIC1.2□□□□□ -2.22
SCN11AQ9UI33 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms