Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 RPL31P60-201ENST00000478450 367 ntBASIC4.2□□□□□ -1.74
USP25Q9UHP3 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.2□□□□□ -1.74
USP25Q9UHP3 RNA5SP401-201ENST00000515920 127 ntBASIC4.2□□□□□ -1.74
USP25Q9UHP3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.2□□□□□ -1.74
USP25Q9UHP3 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
USP25Q9UHP3 AC011979.2-201ENST00000527568 352 ntBASIC4.2□□□□□ -1.74
USP25Q9UHP3 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.2□□□□□ -1.74
USP25Q9UHP3 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.2□□□□□ -1.74
USP25Q9UHP3 AC093012.1-202ENST00000549403 582 ntBASIC4.2□□□□□ -1.74
USP25Q9UHP3 TGIF1P1-201ENST00000558095 802 ntBASIC4.2□□□□□ -1.74
USP25Q9UHP3 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.2□□□□□ -1.74
USP25Q9UHP3 RPS3AP23-202ENST00000574601 686 ntBASIC4.2□□□□□ -1.74
USP25Q9UHP3 AC044792.1-201ENST00000593294 196 ntBASIC4.2□□□□□ -1.74
USP25Q9UHP3 VN1R85P-201ENST00000601587 426 ntBASIC4.2□□□□□ -1.74
USP25Q9UHP3 AL606490.9-201ENST00000603331 271 ntBASIC4.2□□□□□ -1.74
USP25Q9UHP3 AC013553.2-201ENST00000604244 589 ntBASIC4.2□□□□□ -1.74
USP25Q9UHP3 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC4.2□□□□□ -1.74
USP25Q9UHP3 AC004696.1-201ENST00000614345 607 ntBASIC4.2□□□□□ -1.74
USP25Q9UHP3 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
USP25Q9UHP3 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.2□□□□□ -1.74
USP25Q9UHP3 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.2□□□□□ -1.74
USP25Q9UHP3 AC112487.2-201ENST00000637950 304 ntBASIC4.2□□□□□ -1.74
USP25Q9UHP3 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
USP25Q9UHP3 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.2□□□□□ -1.74
USP25Q9UHP3 AC090740.1-201ENST00000623193 2262 ntBASIC4.2□□□□□ -1.74
USP25Q9UHP3 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
USP25Q9UHP3 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.19□□□□□ -1.74
USP25Q9UHP3 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.19□□□□□ -1.74
USP25Q9UHP3 AC002546.1-201ENST00000588041 2504 ntBASIC4.19□□□□□ -1.74
USP25Q9UHP3 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.19□□□□□ -1.74
USP25Q9UHP3 SPRR2C-201ENST00000290702 219 ntBASIC4.19□□□□□ -1.74
USP25Q9UHP3 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
USP25Q9UHP3 Y_RNA.22-201ENST00000362492 102 ntBASIC4.19□□□□□ -1.74
USP25Q9UHP3 RNU6-1284P-201ENST00000363701 100 ntBASIC4.19□□□□□ -1.74
USP25Q9UHP3 U3.11-201ENST00000364476 212 ntBASIC4.19□□□□□ -1.74
USP25Q9UHP3 Y_RNA.367-201ENST00000365544 101 ntBASIC4.19□□□□□ -1.74
USP25Q9UHP3 RNU4-48P-201ENST00000365559 182 ntBASIC4.19□□□□□ -1.74
USP25Q9UHP3 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
USP25Q9UHP3 Y_RNA.529-201ENST00000384586 119 ntBASIC4.19□□□□□ -1.74
USP25Q9UHP3 MIR493-201ENST00000385254 89 ntBASIC4.19□□□□□ -1.74
USP25Q9UHP3 PPIAP31-201ENST00000405422 495 ntBASIC4.19□□□□□ -1.74
USP25Q9UHP3 AL591034.1-201ENST00000407447 340 ntBASIC4.19□□□□□ -1.74
USP25Q9UHP3 MTHFD2P2-201ENST00000407725 247 ntBASIC4.19□□□□□ -1.74
USP25Q9UHP3 U3.42-201ENST00000408746 214 ntBASIC4.19□□□□□ -1.74
USP25Q9UHP3 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.19□□□□□ -1.74
USP25Q9UHP3 RNU6-55P-201ENST00000411092 107 ntBASIC4.19□□□□□ -1.74
USP25Q9UHP3 RNU6-954P-201ENST00000411355 107 ntBASIC4.19□□□□□ -1.74
USP25Q9UHP3 PDCL2P1-201ENST00000419302 352 ntBASIC4.19□□□□□ -1.74
USP25Q9UHP3 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.19□□□□□ -1.74
USP25Q9UHP3 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.19□□□□□ -1.74
USP25Q9UHP3 NDUFB4P7-201ENST00000423198 363 ntBASIC4.19□□□□□ -1.74
USP25Q9UHP3 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.19□□□□□ -1.74
USP25Q9UHP3 MTCO3P46-201ENST00000425787 232 ntBASIC4.19□□□□□ -1.74
USP25Q9UHP3 AL590383.1-201ENST00000428602 75 ntBASIC4.19□□□□□ -1.74
USP25Q9UHP3 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.19□□□□□ -1.74
USP25Q9UHP3 AL117339.2-201ENST00000430475 180 ntBASIC4.19□□□□□ -1.74
USP25Q9UHP3 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.19□□□□□ -1.74
USP25Q9UHP3 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.19□□□□□ -1.74
USP25Q9UHP3 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.19□□□□□ -1.74
USP25Q9UHP3 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.19□□□□□ -1.74
USP25Q9UHP3 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.19□□□□□ -1.74
USP25Q9UHP3 GMFBP1-201ENST00000467831 427 ntBASIC4.19□□□□□ -1.74
USP25Q9UHP3 SCARNA15.2-201ENST00000516409 127 ntBASIC4.19□□□□□ -1.74
USP25Q9UHP3 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.19□□□□□ -1.74
USP25Q9UHP3 AC022695.1-201ENST00000522089 237 ntBASIC4.19□□□□□ -1.74
USP25Q9UHP3 OR5AL2P-201ENST00000532185 920 ntBASIC4.19□□□□□ -1.74
USP25Q9UHP3 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.19□□□□□ -1.74
USP25Q9UHP3 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.19□□□□□ -1.74
USP25Q9UHP3 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.19□□□□□ -1.74
USP25Q9UHP3 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.19□□□□□ -1.74
USP25Q9UHP3 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
USP25Q9UHP3 MIR4293-201ENST00000584305 78 ntBASIC4.19□□□□□ -1.74
USP25Q9UHP3 AC093227.2-201ENST00000589357 285 ntBASIC4.19□□□□□ -1.74
USP25Q9UHP3 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.19□□□□□ -1.74
USP25Q9UHP3 XIST_intron.1-201ENST00000619444 68 ntBASIC4.19□□□□□ -1.74
USP25Q9UHP3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
USP25Q9UHP3 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
USP25Q9UHP3 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
USP25Q9UHP3 AC091152.2-201ENST00000591628 2569 ntBASIC4.18□□□□□ -1.74
USP25Q9UHP3 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
USP25Q9UHP3 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
USP25Q9UHP3 OR4G2P-202ENST00000641004 1759 ntBASIC4.18□□□□□ -1.74
USP25Q9UHP3 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
USP25Q9UHP3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.18□□□□□ -1.74
USP25Q9UHP3 HSPE1P11-201ENST00000339579 310 ntBASIC4.18□□□□□ -1.74
USP25Q9UHP3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
USP25Q9UHP3 RNU6-511P-201ENST00000363496 107 ntBASIC4.18□□□□□ -1.74
USP25Q9UHP3 Y_RNA.356-201ENST00000365475 113 ntBASIC4.18□□□□□ -1.74
USP25Q9UHP3 AP002088.1-201ENST00000382740 395 ntBASIC4.18□□□□□ -1.74
USP25Q9UHP3 MIR558-201ENST00000384920 94 ntBASIC4.18□□□□□ -1.74
USP25Q9UHP3 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
USP25Q9UHP3 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
USP25Q9UHP3 UBE2D3P2-201ENST00000424409 445 ntBASIC4.18□□□□□ -1.74
USP25Q9UHP3 MED13P1-201ENST00000428342 171 ntBASIC4.18□□□□□ -1.74
USP25Q9UHP3 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.18□□□□□ -1.74
USP25Q9UHP3 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.18□□□□□ -1.74
USP25Q9UHP3 RPS27AP1-201ENST00000475545 471 ntBASIC4.18□□□□□ -1.74
USP25Q9UHP3 AL163973.1-201ENST00000484753 577 ntBASIC4.18□□□□□ -1.74
USP25Q9UHP3 RN7SL323P-201ENST00000494712 295 ntBASIC4.18□□□□□ -1.74
USP25Q9UHP3 AC110768.1-201ENST00000509222 400 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms