Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.61□□□□□ -1.99
APOBEC3BQ9UH17 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.61□□□□□ -1.99
APOBEC3BQ9UH17 AC109464.2-201ENST00000510242 943 ntBASIC2.61□□□□□ -1.99
APOBEC3BQ9UH17 AC025881.1-201ENST00000518851 512 ntBASIC2.61□□□□□ -1.99
APOBEC3BQ9UH17 MTND4LP18-201ENST00000526864 291 ntBASIC2.61□□□□□ -1.99
APOBEC3BQ9UH17 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
APOBEC3BQ9UH17 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.61□□□□□ -1.99
APOBEC3BQ9UH17 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
APOBEC3BQ9UH17 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.61□□□□□ -1.99
APOBEC3BQ9UH17 MIR548AB-201ENST00000584917 84 ntBASIC2.61□□□□□ -1.99
APOBEC3BQ9UH17 AC106900.2-201ENST00000604994 317 ntBASIC2.61□□□□□ -1.99
APOBEC3BQ9UH17 AL161734.1-201ENST00000609720 557 ntBASIC2.61□□□□□ -1.99
APOBEC3BQ9UH17 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
APOBEC3BQ9UH17 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.61□□□□□ -1.99
APOBEC3BQ9UH17 AC091965.5-201ENST00000624785 342 ntBASIC2.61□□□□□ -1.99
APOBEC3BQ9UH17 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.61□□□□□ -1.99
APOBEC3BQ9UH17 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
APOBEC3BQ9UH17 RNU5E-8P-201ENST00000363502 116 ntBASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 RNU6-637P-201ENST00000384050 107 ntBASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 SNORD116-2-201ENST00000384274 95 ntBASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 SNORD116-6-201ENST00000384711 96 ntBASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 AL512633.1-201ENST00000399931 655 ntBASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 RPS20P2-201ENST00000402520 389 ntBASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 MIR1302-8-201ENST00000408342 128 ntBASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 TMEM167AP1-201ENST00000423409 219 ntBASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 AC118469.1-201ENST00000442943 488 ntBASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 AL121871.1-201ENST00000443413 436 ntBASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 RPL32P28-201ENST00000443577 397 ntBASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 MTND2P22-201ENST00000444325 1033 ntBASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 AP1S2P1-201ENST00000457344 379 ntBASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 AC022483.1-201ENST00000514020 567 ntBASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 RNA5SP148-201ENST00000516527 94 ntBASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 Y_RNA.688-201ENST00000516565 95 ntBASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 SNORA31.22-201ENST00000517204 135 ntBASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 AP000857.1-201ENST00000532151 543 ntBASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 MIR4635-201ENST00000583759 79 ntBASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 TPMTP1-201ENST00000592307 737 ntBASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 AC004067.1-201ENST00000608733 700 ntBASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 AL355472.4-201ENST00000610233 626 ntBASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 AC243829.7-201ENST00000633081 225 ntBASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 ASNSP3-201ENST00000451989 1306 ntBASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
APOBEC3BQ9UH17 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
APOBEC3BQ9UH17 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
APOBEC3BQ9UH17 SNORD62.1-201ENST00000362541 86 ntBASIC2.59□□□□□ -1.99
APOBEC3BQ9UH17 Y_RNA.46-201ENST00000362695 102 ntBASIC2.59□□□□□ -1.99
APOBEC3BQ9UH17 RNU4-21P-201ENST00000362802 126 ntBASIC2.59□□□□□ -1.99
APOBEC3BQ9UH17 RNU6-533P-201ENST00000384144 107 ntBASIC2.59□□□□□ -1.99
APOBEC3BQ9UH17 AL590004.2-201ENST00000404787 371 ntBASIC2.59□□□□□ -1.99
APOBEC3BQ9UH17 RNA5SP508-201ENST00000411327 119 ntBASIC2.59□□□□□ -1.99
APOBEC3BQ9UH17 RNU6-516P-201ENST00000411381 104 ntBASIC2.59□□□□□ -1.99
APOBEC3BQ9UH17 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.59□□□□□ -1.99
APOBEC3BQ9UH17 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.59□□□□□ -1.99
APOBEC3BQ9UH17 BMI1P1-201ENST00000445879 941 ntBASIC2.59□□□□□ -1.99
APOBEC3BQ9UH17 MTATP6P26-201ENST00000445926 662 ntBASIC2.59□□□□□ -1.99
APOBEC3BQ9UH17 COX6CP12-201ENST00000446748 202 ntBASIC2.59□□□□□ -1.99
APOBEC3BQ9UH17 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.59□□□□□ -1.99
APOBEC3BQ9UH17 AP000797.1-201ENST00000478870 387 ntBASIC2.59□□□□□ -1.99
APOBEC3BQ9UH17 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.59□□□□□ -1.99
APOBEC3BQ9UH17 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.59□□□□□ -1.99
APOBEC3BQ9UH17 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.59□□□□□ -1.99
APOBEC3BQ9UH17 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.59□□□□□ -1.99
APOBEC3BQ9UH17 RN7SKP40-201ENST00000517211 242 ntBASIC2.59□□□□□ -1.99
APOBEC3BQ9UH17 AP000907.2-201ENST00000530827 353 ntBASIC2.59□□□□□ -1.99
APOBEC3BQ9UH17 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.59□□□□□ -1.99
APOBEC3BQ9UH17 ZNF519P3-201ENST00000557158 1032 ntBASIC2.59□□□□□ -1.99
APOBEC3BQ9UH17 MIR5697-201ENST00000578045 78 ntBASIC2.59□□□□□ -1.99
APOBEC3BQ9UH17 AC110760.3-201ENST00000598794 467 ntBASIC2.59□□□□□ -1.99
APOBEC3BQ9UH17 AC012065.4-201ENST00000602445 679 ntBASIC2.59□□□□□ -1.99
APOBEC3BQ9UH17 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.59□□□□□ -1.99
APOBEC3BQ9UH17 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.59□□□□□ -1.99
APOBEC3BQ9UH17 AL391813.2-201ENST00000609113 322 ntBASIC2.59□□□□□ -1.99
APOBEC3BQ9UH17 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.59□□□□□ -1.99
APOBEC3BQ9UH17 AC104010.1-201ENST00000616889 150 ntBASIC2.59□□□□□ -1.99
APOBEC3BQ9UH17 SNHG22-203ENST00000617833 660 ntBASIC2.59□□□□□ -1.99
APOBEC3BQ9UH17 AL603758.1-201ENST00000618654 241 ntBASIC2.59□□□□□ -1.99
APOBEC3BQ9UH17 MIR6130-201ENST00000619419 109 ntBASIC2.59□□□□□ -1.99
APOBEC3BQ9UH17 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.59□□□□□ -2
APOBEC3BQ9UH17 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.59□□□□□ -2
APOBEC3BQ9UH17 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
APOBEC3BQ9UH17 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
APOBEC3BQ9UH17 RNU1-39P-201ENST00000383897 165 ntBASIC2.58□□□□□ -2
APOBEC3BQ9UH17 RNU6-76P-201ENST00000384060 104 ntBASIC2.58□□□□□ -2
APOBEC3BQ9UH17 MIR19A-201ENST00000384878 82 ntBASIC2.58□□□□□ -2
APOBEC3BQ9UH17 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms