Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 MIR583-201ENST00000384846 75 ntBASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 SNORA40.18-201ENST00000391200 128 ntBASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 RPL23AP39-201ENST00000415533 405 ntBASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 TAF13P2-201ENST00000416876 286 ntBASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 MTATP6P27-201ENST00000416987 621 ntBASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 XKRYP1-201ENST00000423438 492 ntBASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 RPS3AP44-201ENST00000425466 790 ntBASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 XKRYP2-201ENST00000432915 492 ntBASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 AL645568.3-201ENST00000433683 316 ntBASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 RPL7P54-201ENST00000438336 674 ntBASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 AC068587.2-201ENST00000478386 781 ntBASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 HMGB1P36-201ENST00000487709 576 ntBASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 RNU1-41P-201ENST00000516161 162 ntBASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 RNU1-48P-201ENST00000516400 162 ntBASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 RNU6-528P-201ENST00000516926 100 ntBASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 AC005951.2-201ENST00000576282 495 ntBASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 AL109918.3-201ENST00000603072 338 ntBASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 AP003973.1-201ENST00000604639 691 ntBASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 AC068276.1-201ENST00000605793 379 ntBASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 AP000238.1-201ENST00000608759 426 ntBASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 AC009318.2-201ENST00000610917 651 ntBASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 AL603758.1-201ENST00000618654 241 ntBASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 PISRT1-201ENST00000626175 531 ntBASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.66□□□□□ -2.14
VPS29Q9UBQ0 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
VPS29Q9UBQ0 RNA5SP126-201ENST00000365092 109 ntBASIC1.66□□□□□ -2.14
VPS29Q9UBQ0 RNU6-481P-201ENST00000384194 107 ntBASIC1.66□□□□□ -2.14
VPS29Q9UBQ0 AL512604.1-201ENST00000404812 257 ntBASIC1.66□□□□□ -2.14
VPS29Q9UBQ0 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.66□□□□□ -2.14
VPS29Q9UBQ0 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.66□□□□□ -2.14
VPS29Q9UBQ0 BX276092.3-201ENST00000424182 230 ntBASIC1.66□□□□□ -2.14
VPS29Q9UBQ0 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.66□□□□□ -2.14
VPS29Q9UBQ0 RPL35AP22-201ENST00000436855 335 ntBASIC1.66□□□□□ -2.14
VPS29Q9UBQ0 AL691517.1-201ENST00000440833 1235 ntBASIC1.66□□□□□ -2.14
VPS29Q9UBQ0 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.66□□□□□ -2.14
VPS29Q9UBQ0 MTND3P4-201ENST00000453537 303 ntBASIC1.66□□□□□ -2.14
VPS29Q9UBQ0 MTCO1P42-201ENST00000457379 726 ntBASIC1.66□□□□□ -2.14
VPS29Q9UBQ0 AC026410.2-201ENST00000460281 156 ntBASIC1.66□□□□□ -2.14
VPS29Q9UBQ0 RPS20P20-201ENST00000460498 340 ntBASIC1.66□□□□□ -2.14
VPS29Q9UBQ0 UBL5P3-201ENST00000475112 231 ntBASIC1.66□□□□□ -2.14
VPS29Q9UBQ0 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
VPS29Q9UBQ0 AC008526.1-201ENST00000509149 338 ntBASIC1.66□□□□□ -2.14
VPS29Q9UBQ0 SNORA76.2-201ENST00000517095 137 ntBASIC1.66□□□□□ -2.14
VPS29Q9UBQ0 RNU6-840P-201ENST00000517275 65 ntBASIC1.66□□□□□ -2.14
VPS29Q9UBQ0 AC104581.2-201ENST00000572227 430 ntBASIC1.66□□□□□ -2.14
VPS29Q9UBQ0 KATNBL1P5-201ENST00000605015 517 ntBASIC1.66□□□□□ -2.14
VPS29Q9UBQ0 AC093673.2-201ENST00000609674 331 ntBASIC1.66□□□□□ -2.14
VPS29Q9UBQ0 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.66□□□□□ -2.14
VPS29Q9UBQ0 AC013476.2-201ENST00000614456 459 ntBASIC1.66□□□□□ -2.14
VPS29Q9UBQ0 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.66□□□□□ -2.14
VPS29Q9UBQ0 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
VPS29Q9UBQ0 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
VPS29Q9UBQ0 AC110491.1-201ENST00000562191 2010 ntBASIC1.66□□□□□ -2.14
VPS29Q9UBQ0 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.65□□□□□ -2.14
VPS29Q9UBQ0 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
VPS29Q9UBQ0 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
VPS29Q9UBQ0 RNU5E-8P-201ENST00000363502 116 ntBASIC1.65□□□□□ -2.15
VPS29Q9UBQ0 U6atac.2-201ENST00000408644 118 ntBASIC1.65□□□□□ -2.15
VPS29Q9UBQ0 AL355994.1-201ENST00000424379 260 ntBASIC1.65□□□□□ -2.15
VPS29Q9UBQ0 AIMP1P2-201ENST00000425294 312 ntBASIC1.65□□□□□ -2.15
VPS29Q9UBQ0 AC098831.1-201ENST00000440661 216 ntBASIC1.65□□□□□ -2.15
VPS29Q9UBQ0 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.65□□□□□ -2.15
VPS29Q9UBQ0 AL500527.1-201ENST00000448532 255 ntBASIC1.65□□□□□ -2.15
VPS29Q9UBQ0 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.65□□□□□ -2.15
VPS29Q9UBQ0 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC1.65□□□□□ -2.15
VPS29Q9UBQ0 RPL23AP42-201ENST00000471152 471 ntBASIC1.65□□□□□ -2.15
VPS29Q9UBQ0 RPS27AP10-201ENST00000496103 208 ntBASIC1.65□□□□□ -2.15
VPS29Q9UBQ0 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
VPS29Q9UBQ0 AF213884.2-201ENST00000510417 903 ntBASIC1.65□□□□□ -2.15
VPS29Q9UBQ0 RPL23AP94-201ENST00000512518 302 ntBASIC1.65□□□□□ -2.15
VPS29Q9UBQ0 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.65□□□□□ -2.15
VPS29Q9UBQ0 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.65□□□□□ -2.15
VPS29Q9UBQ0 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.65□□□□□ -2.15
VPS29Q9UBQ0 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
VPS29Q9UBQ0 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.65□□□□□ -2.15
VPS29Q9UBQ0 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.65□□□□□ -2.15
VPS29Q9UBQ0 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
VPS29Q9UBQ0 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.65□□□□□ -2.15
VPS29Q9UBQ0 AL596245.1-201ENST00000618994 362 ntBASIC1.65□□□□□ -2.15
VPS29Q9UBQ0 AL158801.5-201ENST00000623123 465 ntBASIC1.65□□□□□ -2.15
VPS29Q9UBQ0 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
VPS29Q9UBQ0 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.64□□□□□ -2.15
VPS29Q9UBQ0 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.64□□□□□ -2.15
VPS29Q9UBQ0 RNU6-1066P-201ENST00000363573 105 ntBASIC1.64□□□□□ -2.15
VPS29Q9UBQ0 U8.14-201ENST00000390843 143 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms