Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 MTND5P30-201ENST00000452896 1731 ntBASIC1.21□□□□□ -2.22
COMMD3Q9UBI1 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
COMMD3Q9UBI1 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
COMMD3Q9UBI1 MIR126-201ENST00000362291 85 ntBASIC1.21□□□□□ -2.22
COMMD3Q9UBI1 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
COMMD3Q9UBI1 Y_RNA.500-201ENST00000384466 111 ntBASIC1.21□□□□□ -2.22
COMMD3Q9UBI1 MIR504-201ENST00000385065 83 ntBASIC1.21□□□□□ -2.22
COMMD3Q9UBI1 MIR514A1-201ENST00000385133 98 ntBASIC1.21□□□□□ -2.22
COMMD3Q9UBI1 MIR758-201ENST00000390227 88 ntBASIC1.21□□□□□ -2.22
COMMD3Q9UBI1 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
COMMD3Q9UBI1 RNU2-47P-201ENST00000410649 186 ntBASIC1.21□□□□□ -2.22
COMMD3Q9UBI1 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.21□□□□□ -2.22
COMMD3Q9UBI1 AL358453.1-201ENST00000422522 250 ntBASIC1.21□□□□□ -2.22
COMMD3Q9UBI1 AL513185.2-201ENST00000425543 193 ntBASIC1.21□□□□□ -2.22
COMMD3Q9UBI1 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.21□□□□□ -2.22
COMMD3Q9UBI1 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.21□□□□□ -2.22
COMMD3Q9UBI1 AL121601.2-201ENST00000438019 707 ntBASIC1.21□□□□□ -2.22
COMMD3Q9UBI1 THAP5P1-201ENST00000439089 262 ntBASIC1.21□□□□□ -2.22
COMMD3Q9UBI1 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.21□□□□□ -2.22
COMMD3Q9UBI1 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.21□□□□□ -2.22
COMMD3Q9UBI1 MTCO1P48-201ENST00000448024 1096 ntBASIC1.21□□□□□ -2.22
COMMD3Q9UBI1 AC008834.1-201ENST00000511612 175 ntBASIC1.21□□□□□ -2.22
COMMD3Q9UBI1 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.21□□□□□ -2.22
COMMD3Q9UBI1 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.21□□□□□ -2.22
COMMD3Q9UBI1 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
COMMD3Q9UBI1 AL671309.1-201ENST00000603750 544 ntBASIC1.21□□□□□ -2.22
COMMD3Q9UBI1 BNIP3P19-201ENST00000605397 577 ntBASIC1.21□□□□□ -2.22
COMMD3Q9UBI1 AC006338.1-201ENST00000618453 749 ntBASIC1.21□□□□□ -2.22
COMMD3Q9UBI1 MIR6130-201ENST00000619419 109 ntBASIC1.21□□□□□ -2.22
COMMD3Q9UBI1 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.21□□□□□ -2.22
COMMD3Q9UBI1 LINC02211-204ENST00000642024 1070 ntBASIC1.21□□□□□ -2.22
COMMD3Q9UBI1 AC010889.1-201ENST00000566193 2666 ntBASIC1.21□□□□□ -2.22
COMMD3Q9UBI1 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.21□□□□□ -2.22
COMMD3Q9UBI1 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
COMMD3Q9UBI1 U8.1-201ENST00000362843 134 ntBASIC1.2□□□□□ -2.22
COMMD3Q9UBI1 RNU1-72P-201ENST00000362976 153 ntBASIC1.2□□□□□ -2.22
COMMD3Q9UBI1 Y_RNA.111-201ENST00000363248 100 ntBASIC1.2□□□□□ -2.22
COMMD3Q9UBI1 U3.13-201ENST00000364804 214 ntBASIC1.2□□□□□ -2.22
COMMD3Q9UBI1 SNORA51.6-201ENST00000384151 125 ntBASIC1.2□□□□□ -2.22
COMMD3Q9UBI1 SNORA8-201ENST00000384574 139 ntBASIC1.2□□□□□ -2.22
COMMD3Q9UBI1 RNU6-748P-201ENST00000384648 107 ntBASIC1.2□□□□□ -2.22
COMMD3Q9UBI1 AL627390.1-201ENST00000396055 340 ntBASIC1.2□□□□□ -2.22
COMMD3Q9UBI1 AL356421.1-201ENST00000403255 413 ntBASIC1.2□□□□□ -2.22
COMMD3Q9UBI1 AL589655.1-201ENST00000405398 482 ntBASIC1.2□□□□□ -2.22
COMMD3Q9UBI1 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.2□□□□□ -2.22
COMMD3Q9UBI1 BX276092.3-201ENST00000424182 230 ntBASIC1.2□□□□□ -2.22
COMMD3Q9UBI1 SDAD1P3-201ENST00000427380 333 ntBASIC1.2□□□□□ -2.22
COMMD3Q9UBI1 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.2□□□□□ -2.22
COMMD3Q9UBI1 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC1.2□□□□□ -2.22
COMMD3Q9UBI1 AP000949.1-201ENST00000438328 629 ntBASIC1.2□□□□□ -2.22
COMMD3Q9UBI1 RPL26P9-201ENST00000457466 433 ntBASIC1.2□□□□□ -2.22
COMMD3Q9UBI1 AC093801.2-201ENST00000503966 1050 ntBASIC1.2□□□□□ -2.22
COMMD3Q9UBI1 AC119751.5-201ENST00000514077 770 ntBASIC1.2□□□□□ -2.22
COMMD3Q9UBI1 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.2□□□□□ -2.22
COMMD3Q9UBI1 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC1.2□□□□□ -2.22
COMMD3Q9UBI1 GNAI2P1-201ENST00000541815 315 ntBASIC1.2□□□□□ -2.22
COMMD3Q9UBI1 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.2□□□□□ -2.22
COMMD3Q9UBI1 AC091544.4-201ENST00000555268 342 ntBASIC1.2□□□□□ -2.22
COMMD3Q9UBI1 AC093510.2-201ENST00000562820 896 ntBASIC1.2□□□□□ -2.22
COMMD3Q9UBI1 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.2□□□□□ -2.22
COMMD3Q9UBI1 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.2□□□□□ -2.22
COMMD3Q9UBI1 AL391813.1-201ENST00000603098 260 ntBASIC1.2□□□□□ -2.22
COMMD3Q9UBI1 SEPT7P9-203ENST00000604116 343 ntBASIC1.2□□□□□ -2.22
COMMD3Q9UBI1 MTND4LP5-201ENST00000605152 292 ntBASIC1.2□□□□□ -2.22
COMMD3Q9UBI1 MTCO1P18-201ENST00000455518 1419 ntBASIC1.2□□□□□ -2.22
COMMD3Q9UBI1 AL161722.3-201ENST00000605789 2983 ntBASIC1.2□□□□□ -2.22
COMMD3Q9UBI1 RNU6-741P-201ENST00000383889 107 ntBASIC1.19□□□□□ -2.22
COMMD3Q9UBI1 RNU6-76P-201ENST00000384060 104 ntBASIC1.19□□□□□ -2.22
COMMD3Q9UBI1 MIR150-201ENST00000385048 84 ntBASIC1.19□□□□□ -2.22
COMMD3Q9UBI1 MIR888-201ENST00000401186 77 ntBASIC1.19□□□□□ -2.22
COMMD3Q9UBI1 NDUFS5P1-201ENST00000405668 289 ntBASIC1.19□□□□□ -2.22
COMMD3Q9UBI1 AL356131.1-201ENST00000405826 414 ntBASIC1.19□□□□□ -2.22
COMMD3Q9UBI1 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
COMMD3Q9UBI1 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.19□□□□□ -2.22
COMMD3Q9UBI1 AC007742.1-201ENST00000425789 329 ntBASIC1.19□□□□□ -2.22
COMMD3Q9UBI1 RPL31P54-201ENST00000429803 370 ntBASIC1.19□□□□□ -2.22
COMMD3Q9UBI1 MED14P1-201ENST00000430517 648 ntBASIC1.19□□□□□ -2.22
COMMD3Q9UBI1 AC015922.2-201ENST00000435593 184 ntBASIC1.19□□□□□ -2.22
COMMD3Q9UBI1 ELOCP26-201ENST00000436067 329 ntBASIC1.19□□□□□ -2.22
COMMD3Q9UBI1 RAD1P2-201ENST00000446414 663 ntBASIC1.19□□□□□ -2.22
COMMD3Q9UBI1 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.19□□□□□ -2.22
COMMD3Q9UBI1 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.19□□□□□ -2.22
COMMD3Q9UBI1 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.19□□□□□ -2.22
COMMD3Q9UBI1 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
COMMD3Q9UBI1 AC084033.1-201ENST00000550830 633 ntBASIC1.19□□□□□ -2.22
COMMD3Q9UBI1 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.19□□□□□ -2.22
COMMD3Q9UBI1 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.19□□□□□ -2.22
COMMD3Q9UBI1 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC1.19□□□□□ -2.22
COMMD3Q9UBI1 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.19□□□□□ -2.22
COMMD3Q9UBI1 AC068338.1-201ENST00000565567 176 ntBASIC1.19□□□□□ -2.22
COMMD3Q9UBI1 MIR4255-201ENST00000579351 72 ntBASIC1.19□□□□□ -2.22
COMMD3Q9UBI1 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.19□□□□□ -2.22
COMMD3Q9UBI1 TUG1_1.1-201ENST00000610654 145 ntBASIC1.19□□□□□ -2.22
COMMD3Q9UBI1 AC024581.2-201ENST00000619986 252 ntBASIC1.19□□□□□ -2.22
COMMD3Q9UBI1 MIR7843-201ENST00000622274 79 ntBASIC1.19□□□□□ -2.22
COMMD3Q9UBI1 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.19□□□□□ -2.22
COMMD3Q9UBI1 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.18□□□□□ -2.22
COMMD3Q9UBI1 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
COMMD3Q9UBI1 RNU6-252P-201ENST00000363232 107 ntBASIC1.18□□□□□ -2.22
COMMD3Q9UBI1 SNORA70B-201ENST00000384210 135 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms