Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 AC073544.1-201ENST00000600110 1595 ntBASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.8□□□□□ -1.8
DNMT3BQ9UBC3 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 RNU6-552P-201ENST00000362869 119 ntBASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 RNU6-1287P-201ENST00000362914 107 ntBASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 Y_RNA.157-201ENST00000363638 102 ntBASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 SNORD115-7-201ENST00000365306 82 ntBASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 RNU6-1060P-201ENST00000384664 107 ntBASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 OR6C66P-201ENST00000414917 930 ntBASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 RPL21P111-201ENST00000418453 477 ntBASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 HMGB1P27-201ENST00000431429 603 ntBASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 FABP5P13-201ENST00000452144 328 ntBASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 RPL21P10-201ENST00000463521 490 ntBASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 RPL31P13-201ENST00000484151 370 ntBASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 RPL32P34-201ENST00000486380 400 ntBASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 AC092436.1-201ENST00000506450 503 ntBASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 AC098799.2-201ENST00000509466 868 ntBASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 RNU4-29P-201ENST00000515943 174 ntBASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 RANP3-201ENST00000530970 276 ntBASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 OR5B19P-201ENST00000531766 928 ntBASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 MED28P6-201ENST00000558776 231 ntBASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 AC005951.2-201ENST00000576282 495 ntBASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 MIR3921-201ENST00000577308 85 ntBASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 AC006270.2-201ENST00000578523 652 ntBASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 AC104763.2-201ENST00000604179 382 ntBASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 AC006077.1-201ENST00000604746 343 ntBASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 AL353621.2-201ENST00000605340 133 ntBASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 AP002826.1-201ENST00000608835 315 ntBASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 AC006504.8-201ENST00000621046 635 ntBASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
DNMT3BQ9UBC3 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 OR4G1P-203ENST00000641984 1631 ntBASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 AL139276.1-201ENST00000311910 1001 ntBASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 RNU1-33P-201ENST00000364249 162 ntBASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 Y_RNA.576-201ENST00000384781 102 ntBASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 RNU6-903P-201ENST00000391270 109 ntBASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 HMGN2P8-201ENST00000391458 268 ntBASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 AL606923.1-201ENST00000406616 190 ntBASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 RNU6-193P-201ENST00000410977 107 ntBASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 RN7SKP140-201ENST00000411196 284 ntBASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 AC012498.1-201ENST00000424037 437 ntBASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 AL513185.2-201ENST00000425543 193 ntBASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 SNRPFP3-201ENST00000457792 225 ntBASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 AL162395.1-201ENST00000457882 422 ntBASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 RNU6-953P-201ENST00000459154 107 ntBASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 RN7SL601P-201ENST00000471221 293 ntBASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 AP000926.1-201ENST00000479573 241 ntBASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 AC025518.1-201ENST00000479856 347 ntBASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 MTCYBP18-201ENST00000501056 747 ntBASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 AC104806.1-201ENST00000508720 308 ntBASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 AL359273.1-201ENST00000510918 627 ntBASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 SNORA31.8-201ENST00000516327 108 ntBASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 RNU6-677P-201ENST00000516914 101 ntBASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 RNU6-1231P-201ENST00000517185 103 ntBASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 SUB1P1-201ENST00000524415 382 ntBASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 CENPUP1-201ENST00000526649 1202 ntBASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 AP005435.4-201ENST00000529514 284 ntBASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 AP004242.1-201ENST00000533701 349 ntBASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.78□□□□□ -1.8
DNMT3BQ9UBC3 AC067852.3-201ENST00000589177 561 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms