Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
LRIT1Q9P2V4 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.82□□□□□ -1.8
LRIT1Q9P2V4 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 AC121333.1-201ENST00000567488 2709 ntBASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 API5P2-201ENST00000397055 1498 ntBASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 RNA5SP124-201ENST00000362739 110 ntBASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 RNU6-960P-201ENST00000364056 120 ntBASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 SNORA22B-201ENST00000383876 138 ntBASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 MIR513A2-201ENST00000385249 127 ntBASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 RNU6-550P-201ENST00000391057 101 ntBASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 RNU6-754P-201ENST00000391166 107 ntBASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 RN7SKP158-201ENST00000410453 326 ntBASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 RNU6-370P-201ENST00000411008 104 ntBASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 AL160275.2-201ENST00000412010 394 ntBASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 RPL7AP73-201ENST00000413490 353 ntBASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 MTCO2P27-201ENST00000420740 428 ntBASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 PMCHL1-202ENST00000423102 261 ntBASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 SKA2P1-201ENST00000425592 390 ntBASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 AC069285.2-201ENST00000440210 275 ntBASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 AC004801.2-202ENST00000463559 283 ntBASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 AC006517.1-201ENST00000480485 328 ntBASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 AC090096.1-201ENST00000489168 390 ntBASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 RPL23AP55-201ENST00000498163 452 ntBASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 HMGB1P22-201ENST00000505315 124 ntBASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 AC017037.1-201ENST00000508460 471 ntBASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 AC108078.2-201ENST00000510750 236 ntBASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 RNU6-566P-201ENST00000516790 107 ntBASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 RNU6-352P-201ENST00000516908 107 ntBASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 SNORA31.20-201ENST00000517111 133 ntBASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 AL121603.1-201ENST00000553815 142 ntBASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 OR11H5P-201ENST00000554039 926 ntBASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 AC008521.1-201ENST00000587471 187 ntBASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 AC008739.3-201ENST00000603262 127 ntBASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 AC092747.3-201ENST00000603769 301 ntBASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 AC005344.1-201ENST00000613391 459 ntBASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRIT1Q9P2V4 AL365440.1-201ENST00000436135 2167 ntBASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 AC004925.1-201ENST00000624256 2706 ntBASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 AC007685.1-201ENST00000329806 452 ntBASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 Y_RNA.395-201ENST00000383945 109 ntBASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 RNU6-637P-201ENST00000384050 107 ntBASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 Y_RNA.445-201ENST00000384168 102 ntBASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 AL109755.1-201ENST00000401791 649 ntBASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 SNORA3C-201ENST00000408792 125 ntBASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 RNU6-712P-201ENST00000410558 100 ntBASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 POLHP1-201ENST00000411806 470 ntBASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 RPL30P2-201ENST00000414021 291 ntBASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 UBE2FP1-201ENST00000416536 447 ntBASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 RPS15AP27-201ENST00000449183 343 ntBASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 RPS24P6-201ENST00000452670 400 ntBASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 AC010285.1-201ENST00000470580 392 ntBASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 AC025554.1-201ENST00000505641 188 ntBASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 RNU6-1073P-201ENST00000517182 106 ntBASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 AP000763.2-201ENST00000540641 163 ntBASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.8□□□□□ -1.8
LRIT1Q9P2V4 AL121576.1-201ENST00000556055 276 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms