Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 RPL37P6-201ENST00000460682 294 ntBASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 RPL21P10-201ENST00000463521 490 ntBASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 NDUFB4P2-201ENST00000509515 391 ntBASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 RNU2-46P-201ENST00000517038 113 ntBASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 AC138761.3-201ENST00000579993 334 ntBASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 HMGN2P15-201ENST00000585707 270 ntBASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 CLIC4P2-201ENST00000601934 717 ntBASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 OR2AS2P-201ENST00000606902 342 ntBASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 AC107294.1-201ENST00000609524 467 ntBASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 uc_338.25-201ENST00000613756 156 ntBASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 AL137003.2-201ENST00000606924 2538 ntBASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 AL359693.1-201ENST00000614959 2407 ntBASIC3.13□□□□□ -1.91
CPSF2Q9P2I0 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
CPSF2Q9P2I0 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CPSF2Q9P2I0 SNORD56.2-201ENST00000363242 71 ntBASIC3.13□□□□□ -1.91
CPSF2Q9P2I0 U8.3-201ENST00000363321 132 ntBASIC3.13□□□□□ -1.91
CPSF2Q9P2I0 RNU6-188P-201ENST00000364207 107 ntBASIC3.13□□□□□ -1.91
CPSF2Q9P2I0 SNORA40.3-201ENST00000390964 122 ntBASIC3.13□□□□□ -1.91
CPSF2Q9P2I0 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.13□□□□□ -1.91
CPSF2Q9P2I0 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.13□□□□□ -1.91
CPSF2Q9P2I0 USP9YP15-201ENST00000442391 422 ntBASIC3.13□□□□□ -1.91
CPSF2Q9P2I0 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CPSF2Q9P2I0 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.13□□□□□ -1.91
CPSF2Q9P2I0 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.13□□□□□ -1.91
CPSF2Q9P2I0 RNU7-51P-201ENST00000516560 62 ntBASIC3.13□□□□□ -1.91
CPSF2Q9P2I0 RNA5SP165-201ENST00000517142 115 ntBASIC3.13□□□□□ -1.91
CPSF2Q9P2I0 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.13□□□□□ -1.91
CPSF2Q9P2I0 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.13□□□□□ -1.91
CPSF2Q9P2I0 AL359212.1-201ENST00000556608 614 ntBASIC3.13□□□□□ -1.91
CPSF2Q9P2I0 RPL21P12-201ENST00000559810 515 ntBASIC3.13□□□□□ -1.91
CPSF2Q9P2I0 MIR2682-201ENST00000580305 110 ntBASIC3.13□□□□□ -1.91
CPSF2Q9P2I0 AC110760.3-201ENST00000598794 467 ntBASIC3.13□□□□□ -1.91
CPSF2Q9P2I0 BNIP3P33-201ENST00000598912 569 ntBASIC3.13□□□□□ -1.91
CPSF2Q9P2I0 AL137843.1-201ENST00000605078 385 ntBASIC3.13□□□□□ -1.91
CPSF2Q9P2I0 MTND4LP5-201ENST00000605152 292 ntBASIC3.13□□□□□ -1.91
CPSF2Q9P2I0 AC073657.2-201ENST00000605661 303 ntBASIC3.13□□□□□ -1.91
CPSF2Q9P2I0 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.13□□□□□ -1.91
CPSF2Q9P2I0 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.13□□□□□ -1.91
CPSF2Q9P2I0 AC004852.3-201ENST00000614131 326 ntBASIC3.13□□□□□ -1.91
CPSF2Q9P2I0 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.13□□□□□ -1.91
CPSF2Q9P2I0 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CPSF2Q9P2I0 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CPSF2Q9P2I0 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CPSF2Q9P2I0 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.12□□□□□ -1.91
CPSF2Q9P2I0 RNU6-39P-201ENST00000384344 107 ntBASIC3.12□□□□□ -1.91
CPSF2Q9P2I0 RNU6-297P-201ENST00000384636 107 ntBASIC3.12□□□□□ -1.91
CPSF2Q9P2I0 AL139095.1-201ENST00000404326 391 ntBASIC3.12□□□□□ -1.91
CPSF2Q9P2I0 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.12□□□□□ -1.91
CPSF2Q9P2I0 ELOCP4-201ENST00000420090 333 ntBASIC3.12□□□□□ -1.91
CPSF2Q9P2I0 AC137499.1-201ENST00000427602 88 ntBASIC3.12□□□□□ -1.91
CPSF2Q9P2I0 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.12□□□□□ -1.91
CPSF2Q9P2I0 GPM6BP2-201ENST00000432046 144 ntBASIC3.12□□□□□ -1.91
CPSF2Q9P2I0 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.12□□□□□ -1.91
CPSF2Q9P2I0 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.12□□□□□ -1.91
CPSF2Q9P2I0 GPM6BP1-201ENST00000446387 144 ntBASIC3.12□□□□□ -1.91
CPSF2Q9P2I0 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.12□□□□□ -1.91
CPSF2Q9P2I0 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.12□□□□□ -1.91
CPSF2Q9P2I0 RPL36AP51-201ENST00000487216 318 ntBASIC3.12□□□□□ -1.91
CPSF2Q9P2I0 RPS29P20-201ENST00000489592 171 ntBASIC3.12□□□□□ -1.91
CPSF2Q9P2I0 SUMO2P6-201ENST00000505273 288 ntBASIC3.12□□□□□ -1.91
CPSF2Q9P2I0 AC114786.4-201ENST00000508771 728 ntBASIC3.12□□□□□ -1.91
CPSF2Q9P2I0 AC108043.1-201ENST00000512696 574 ntBASIC3.12□□□□□ -1.91
CPSF2Q9P2I0 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.12□□□□□ -1.91
CPSF2Q9P2I0 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.12□□□□□ -1.91
CPSF2Q9P2I0 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.12□□□□□ -1.91
CPSF2Q9P2I0 AC011611.1-201ENST00000552179 197 ntBASIC3.12□□□□□ -1.91
CPSF2Q9P2I0 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.12□□□□□ -1.91
CPSF2Q9P2I0 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.12□□□□□ -1.91
CPSF2Q9P2I0 AP002360.4-201ENST00000606980 481 ntBASIC3.12□□□□□ -1.91
CPSF2Q9P2I0 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.12□□□□□ -1.91
CPSF2Q9P2I0 AC068880.5-201ENST00000624331 290 ntBASIC3.12□□□□□ -1.91
CPSF2Q9P2I0 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CPSF2Q9P2I0 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CPSF2Q9P2I0 AC008669.1-201ENST00000565823 2178 ntBASIC3.12□□□□□ -1.91
CPSF2Q9P2I0 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.12□□□□□ -1.91
CPSF2Q9P2I0 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CPSF2Q9P2I0 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CPSF2Q9P2I0 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CPSF2Q9P2I0 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.11□□□□□ -1.91
CPSF2Q9P2I0 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CPSF2Q9P2I0 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.11□□□□□ -1.91
CPSF2Q9P2I0 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CPSF2Q9P2I0 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CPSF2Q9P2I0 Y_RNA.126-201ENST00000363382 111 ntBASIC3.11□□□□□ -1.91
CPSF2Q9P2I0 RNU6-288P-201ENST00000363690 104 ntBASIC3.11□□□□□ -1.91
CPSF2Q9P2I0 RNU6-960P-201ENST00000364056 120 ntBASIC3.11□□□□□ -1.91
CPSF2Q9P2I0 RNY4P34-201ENST00000364779 95 ntBASIC3.11□□□□□ -1.91
CPSF2Q9P2I0 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms