Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 U2.21-201ENST00000637295 81 ntBASIC3.55□□□□□ -1.84
LRFN1Q9P244 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
LRFN1Q9P244 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.55□□□□□ -1.84
LRFN1Q9P244 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.55□□□□□ -1.84
LRFN1Q9P244 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
LRFN1Q9P244 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.55□□□□□ -1.84
LRFN1Q9P244 AC233263.6-201ENST00000631132 1963 ntBASIC3.54□□□□□ -1.84
LRFN1Q9P244 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
LRFN1Q9P244 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
LRFN1Q9P244 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.54□□□□□ -1.84
LRFN1Q9P244 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LRFN1Q9P244 SNORA4.3-201ENST00000365564 137 ntBASIC3.54□□□□□ -1.84
LRFN1Q9P244 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.54□□□□□ -1.84
LRFN1Q9P244 U1.1-201ENST00000384101 164 ntBASIC3.54□□□□□ -1.84
LRFN1Q9P244 RNU6-550P-201ENST00000391057 101 ntBASIC3.54□□□□□ -1.84
LRFN1Q9P244 CISD1P1-201ENST00000393907 327 ntBASIC3.54□□□□□ -1.84
LRFN1Q9P244 AL590002.1-201ENST00000406554 418 ntBASIC3.54□□□□□ -1.84
LRFN1Q9P244 RNU2-68P-201ENST00000410878 191 ntBASIC3.54□□□□□ -1.84
LRFN1Q9P244 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.54□□□□□ -1.84
LRFN1Q9P244 RPL30P2-201ENST00000414021 291 ntBASIC3.54□□□□□ -1.84
LRFN1Q9P244 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.54□□□□□ -1.84
LRFN1Q9P244 AL139247.1-201ENST00000422768 325 ntBASIC3.54□□□□□ -1.84
LRFN1Q9P244 AL591419.1-201ENST00000427423 339 ntBASIC3.54□□□□□ -1.84
LRFN1Q9P244 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.54□□□□□ -1.84
LRFN1Q9P244 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.54□□□□□ -1.84
LRFN1Q9P244 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.54□□□□□ -1.84
LRFN1Q9P244 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.54□□□□□ -1.84
LRFN1Q9P244 AC092436.1-201ENST00000506450 503 ntBASIC3.54□□□□□ -1.84
LRFN1Q9P244 AC011352.1-201ENST00000512300 793 ntBASIC3.54□□□□□ -1.84
LRFN1Q9P244 RNA5SP164-201ENST00000516533 110 ntBASIC3.54□□□□□ -1.84
LRFN1Q9P244 SNORD59.2-201ENST00000516873 68 ntBASIC3.54□□□□□ -1.84
LRFN1Q9P244 AC022695.1-201ENST00000522089 237 ntBASIC3.54□□□□□ -1.84
LRFN1Q9P244 AP005435.4-201ENST00000529514 284 ntBASIC3.54□□□□□ -1.84
LRFN1Q9P244 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
LRFN1Q9P244 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.54□□□□□ -1.84
LRFN1Q9P244 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.54□□□□□ -1.84
LRFN1Q9P244 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
LRFN1Q9P244 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.54□□□□□ -1.84
LRFN1Q9P244 SRGNP1-201ENST00000603392 451 ntBASIC3.54□□□□□ -1.84
LRFN1Q9P244 AC007621.1-201ENST00000604544 437 ntBASIC3.54□□□□□ -1.84
LRFN1Q9P244 AC008945.2-201ENST00000606056 604 ntBASIC3.54□□□□□ -1.84
LRFN1Q9P244 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
LRFN1Q9P244 AC093536.2-201ENST00000565257 1406 ntBASIC3.53□□□□□ -1.84
LRFN1Q9P244 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LRFN1Q9P244 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LRFN1Q9P244 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LRFN1Q9P244 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
LRFN1Q9P244 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
LRFN1Q9P244 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LRFN1Q9P244 RNA5SP119-201ENST00000362715 117 ntBASIC3.53□□□□□ -1.84
LRFN1Q9P244 SNORA14A-201ENST00000364773 135 ntBASIC3.53□□□□□ -1.84
LRFN1Q9P244 Y_RNA.372-201ENST00000365599 102 ntBASIC3.53□□□□□ -1.84
LRFN1Q9P244 RNU1-89P-201ENST00000384592 164 ntBASIC3.53□□□□□ -1.84
LRFN1Q9P244 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.53□□□□□ -1.84
LRFN1Q9P244 RNU2-29P-201ENST00000410423 189 ntBASIC3.53□□□□□ -1.84
LRFN1Q9P244 RNU4-46P-201ENST00000410818 138 ntBASIC3.53□□□□□ -1.84
LRFN1Q9P244 RNA5SP306-201ENST00000411087 107 ntBASIC3.53□□□□□ -1.84
LRFN1Q9P244 RHEBP3-201ENST00000411920 351 ntBASIC3.53□□□□□ -1.84
LRFN1Q9P244 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.53□□□□□ -1.84
LRFN1Q9P244 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.53□□□□□ -1.84
LRFN1Q9P244 OR6C66P-201ENST00000414917 930 ntBASIC3.53□□□□□ -1.84
LRFN1Q9P244 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.53□□□□□ -1.84
LRFN1Q9P244 RPL7P46-201ENST00000425129 740 ntBASIC3.53□□□□□ -1.84
LRFN1Q9P244 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.53□□□□□ -1.84
LRFN1Q9P244 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.53□□□□□ -1.84
LRFN1Q9P244 AL606489.2-201ENST00000433886 234 ntBASIC3.53□□□□□ -1.84
LRFN1Q9P244 RPL7P54-201ENST00000438336 674 ntBASIC3.53□□□□□ -1.84
LRFN1Q9P244 AC016691.1-201ENST00000441321 413 ntBASIC3.53□□□□□ -1.84
LRFN1Q9P244 MTND1P18-201ENST00000448191 573 ntBASIC3.53□□□□□ -1.84
LRFN1Q9P244 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.53□□□□□ -1.84
LRFN1Q9P244 RNU6-261P-201ENST00000459506 102 ntBASIC3.53□□□□□ -1.84
LRFN1Q9P244 RPL36AP51-201ENST00000487216 318 ntBASIC3.53□□□□□ -1.84
LRFN1Q9P244 EIF4EP3-201ENST00000498782 656 ntBASIC3.53□□□□□ -1.84
LRFN1Q9P244 AC025554.1-201ENST00000505641 188 ntBASIC3.53□□□□□ -1.84
LRFN1Q9P244 HMGN1P11-201ENST00000508668 303 ntBASIC3.53□□□□□ -1.84
LRFN1Q9P244 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.53□□□□□ -1.84
LRFN1Q9P244 RN7SKP219-201ENST00000516825 296 ntBASIC3.53□□□□□ -1.84
LRFN1Q9P244 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.53□□□□□ -1.84
LRFN1Q9P244 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.53□□□□□ -1.84
LRFN1Q9P244 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LRFN1Q9P244 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.53□□□□□ -1.84
LRFN1Q9P244 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.53□□□□□ -1.84
LRFN1Q9P244 AL512360.1-201ENST00000555346 234 ntBASIC3.53□□□□□ -1.84
LRFN1Q9P244 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.53□□□□□ -1.84
LRFN1Q9P244 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.53□□□□□ -1.84
LRFN1Q9P244 AC068135.2-201ENST00000569293 1028 ntBASIC3.53□□□□□ -1.84
LRFN1Q9P244 MIR1273C-201ENST00000578669 77 ntBASIC3.53□□□□□ -1.84
LRFN1Q9P244 AC012603.1-201ENST00000606424 528 ntBASIC3.53□□□□□ -1.84
LRFN1Q9P244 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.53□□□□□ -1.84
LRFN1Q9P244 AC006020.1-201ENST00000420179 1854 ntBASIC3.53□□□□□ -1.84
LRFN1Q9P244 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.52□□□□□ -1.85
LRFN1Q9P244 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
LRFN1Q9P244 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LRFN1Q9P244 AL161912.2-201ENST00000565707 3007 ntBASIC3.52□□□□□ -1.85
LRFN1Q9P244 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LRFN1Q9P244 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.52□□□□□ -1.85
LRFN1Q9P244 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LRFN1Q9P244 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.52□□□□□ -1.85
LRFN1Q9P244 MAPK10-373ENST00000641983 6772 ntBASIC3.52□□□□□ -1.85
LRFN1Q9P244 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 150 ms