Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC002545.1-201ENST00000592511 181 ntBASIC3.88□□□□□ -1.79
COL20A1Q9P218 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.88□□□□□ -1.79
COL20A1Q9P218 AC007687.1-201ENST00000602704 304 ntBASIC3.88□□□□□ -1.79
COL20A1Q9P218 YWHAEP7-203ENST00000622054 312 ntBASIC3.88□□□□□ -1.79
COL20A1Q9P218 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.88□□□□□ -1.79
COL20A1Q9P218 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.88□□□□□ -1.79
COL20A1Q9P218 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.88□□□□□ -1.79
COL20A1Q9P218 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.88□□□□□ -1.79
COL20A1Q9P218 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL20A1Q9P218 AC032011.1-201ENST00000611703 1549 ntBASIC3.88□□□□□ -1.79
COL20A1Q9P218 AC008568.2-201ENST00000623862 2313 ntBASIC3.88□□□□□ -1.79
COL20A1Q9P218 AC006020.1-201ENST00000420179 1854 ntBASIC3.88□□□□□ -1.79
COL20A1Q9P218 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.87□□□□□ -1.79
COL20A1Q9P218 RNU6-534P-201ENST00000364877 106 ntBASIC3.87□□□□□ -1.79
COL20A1Q9P218 RNU6-1283P-201ENST00000365314 105 ntBASIC3.87□□□□□ -1.79
COL20A1Q9P218 RNU2-29P-201ENST00000410423 189 ntBASIC3.87□□□□□ -1.79
COL20A1Q9P218 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.87□□□□□ -1.79
COL20A1Q9P218 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.87□□□□□ -1.79
COL20A1Q9P218 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.87□□□□□ -1.79
COL20A1Q9P218 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.87□□□□□ -1.79
COL20A1Q9P218 HMGB1P12-201ENST00000438594 598 ntBASIC3.87□□□□□ -1.79
COL20A1Q9P218 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.87□□□□□ -1.79
COL20A1Q9P218 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.87□□□□□ -1.79
COL20A1Q9P218 FABP5P13-201ENST00000452144 328 ntBASIC3.87□□□□□ -1.79
COL20A1Q9P218 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.87□□□□□ -1.79
COL20A1Q9P218 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.87□□□□□ -1.79
COL20A1Q9P218 RPS4XP13-201ENST00000483219 789 ntBASIC3.87□□□□□ -1.79
COL20A1Q9P218 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.87□□□□□ -1.79
COL20A1Q9P218 FCF1P8-201ENST00000510322 597 ntBASIC3.87□□□□□ -1.79
COL20A1Q9P218 FTH1P9-201ENST00000513251 355 ntBASIC3.87□□□□□ -1.79
COL20A1Q9P218 SNORA31.3-201ENST00000516029 96 ntBASIC3.87□□□□□ -1.79
COL20A1Q9P218 RN7SKP60-201ENST00000516985 239 ntBASIC3.87□□□□□ -1.79
COL20A1Q9P218 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.87□□□□□ -1.79
COL20A1Q9P218 ATP5F1P5-201ENST00000526403 760 ntBASIC3.87□□□□□ -1.79
COL20A1Q9P218 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.87□□□□□ -1.79
COL20A1Q9P218 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.87□□□□□ -1.79
COL20A1Q9P218 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.87□□□□□ -1.79
COL20A1Q9P218 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.87□□□□□ -1.79
COL20A1Q9P218 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.87□□□□□ -1.79
COL20A1Q9P218 CBX3P5-201ENST00000552017 521 ntBASIC3.87□□□□□ -1.79
COL20A1Q9P218 MTCO3P24-201ENST00000572729 782 ntBASIC3.87□□□□□ -1.79
COL20A1Q9P218 AC024619.4-201ENST00000580924 316 ntBASIC3.87□□□□□ -1.79
COL20A1Q9P218 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.87□□□□□ -1.79
COL20A1Q9P218 AC048347.1-201ENST00000624621 427 ntBASIC3.87□□□□□ -1.79
COL20A1Q9P218 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.87□□□□□ -1.79
COL20A1Q9P218 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.87□□□□□ -1.79
COL20A1Q9P218 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
COL20A1Q9P218 AL672296.1-201ENST00000427780 2158 ntBASIC3.87□□□□□ -1.79
COL20A1Q9P218 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
COL20A1Q9P218 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
COL20A1Q9P218 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
COL20A1Q9P218 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
COL20A1Q9P218 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.87□□□□□ -1.79
COL20A1Q9P218 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
COL20A1Q9P218 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
COL20A1Q9P218 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
COL20A1Q9P218 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
COL20A1Q9P218 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
COL20A1Q9P218 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
COL20A1Q9P218 RNU6-61P-201ENST00000365528 109 ntBASIC3.86□□□□□ -1.79
COL20A1Q9P218 Y_RNA.381-201ENST00000365666 102 ntBASIC3.86□□□□□ -1.79
COL20A1Q9P218 DEFB109C-201ENST00000382575 264 ntBASIC3.86□□□□□ -1.79
COL20A1Q9P218 DEFB109B-201ENST00000382656 264 ntBASIC3.86□□□□□ -1.79
COL20A1Q9P218 RNU6-190P-201ENST00000384154 102 ntBASIC3.86□□□□□ -1.79
COL20A1Q9P218 MIR3074-201ENST00000384885 81 ntBASIC3.86□□□□□ -1.79
COL20A1Q9P218 MIR23A-201ENST00000385245 73 ntBASIC3.86□□□□□ -1.79
COL20A1Q9P218 RNU6-908P-201ENST00000410160 94 ntBASIC3.86□□□□□ -1.79
COL20A1Q9P218 Z99755.1-201ENST00000414048 380 ntBASIC3.86□□□□□ -1.79
COL20A1Q9P218 AC063979.1-201ENST00000415539 377 ntBASIC3.86□□□□□ -1.79
COL20A1Q9P218 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.86□□□□□ -1.79
COL20A1Q9P218 MTND4LP11-201ENST00000422184 280 ntBASIC3.86□□□□□ -1.79
COL20A1Q9P218 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.86□□□□□ -1.79
COL20A1Q9P218 MTCO3P18-201ENST00000440206 761 ntBASIC3.86□□□□□ -1.79
COL20A1Q9P218 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.86□□□□□ -1.79
COL20A1Q9P218 WASF1P1-201ENST00000447560 1131 ntBASIC3.86□□□□□ -1.79
COL20A1Q9P218 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.86□□□□□ -1.79
COL20A1Q9P218 RPS29P15-201ENST00000458329 171 ntBASIC3.86□□□□□ -1.79
COL20A1Q9P218 AC087588.1-201ENST00000462203 316 ntBASIC3.86□□□□□ -1.79
COL20A1Q9P218 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.86□□□□□ -1.79
COL20A1Q9P218 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.86□□□□□ -1.79
COL20A1Q9P218 FCF1P3-201ENST00000496394 590 ntBASIC3.86□□□□□ -1.79
COL20A1Q9P218 RNU6-835P-201ENST00000516974 104 ntBASIC3.86□□□□□ -1.79
COL20A1Q9P218 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.86□□□□□ -1.79
COL20A1Q9P218 AC134698.4-201ENST00000523451 826 ntBASIC3.86□□□□□ -1.79
COL20A1Q9P218 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.86□□□□□ -1.79
COL20A1Q9P218 RANP3-201ENST00000530970 276 ntBASIC3.86□□□□□ -1.79
COL20A1Q9P218 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.86□□□□□ -1.79
COL20A1Q9P218 ADI1P3-201ENST00000549509 470 ntBASIC3.86□□□□□ -1.79
COL20A1Q9P218 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.86□□□□□ -1.79
COL20A1Q9P218 MIR4276-201ENST00000584832 70 ntBASIC3.86□□□□□ -1.79
COL20A1Q9P218 AC008752.3-201ENST00000588113 712 ntBASIC3.86□□□□□ -1.79
COL20A1Q9P218 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.86□□□□□ -1.79
COL20A1Q9P218 DPPA3P3-201ENST00000603842 430 ntBASIC3.86□□□□□ -1.79
COL20A1Q9P218 DISC2.1-201ENST00000612827 205 ntBASIC3.86□□□□□ -1.79
COL20A1Q9P218 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
COL20A1Q9P218 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.86□□□□□ -1.79
COL20A1Q9P218 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
COL20A1Q9P218 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
COL20A1Q9P218 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
COL20A1Q9P218 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms