Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 AL358232.1-201ENST00000448030 501 ntBASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 AL133547.1-201ENST00000448546 220 ntBASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 FABP5P13-201ENST00000452144 328 ntBASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 AC006539.3-201ENST00000454258 129 ntBASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 RPS4XP22-201ENST00000480755 780 ntBASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 AC107934.2-201ENST00000518653 310 ntBASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 AC104027.1-201ENST00000521887 300 ntBASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 AC012507.3-201ENST00000603556 477 ntBASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 AC010591.1-201ENST00000603941 649 ntBASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 AC022893.3-201ENST00000607665 437 ntBASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 AC012409.4-201ENST00000612923 249 ntBASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 AP001486.3-201ENST00000615334 372 ntBASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 AL359547.2-201ENST00000615810 418 ntBASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 AL138880.2-201ENST00000616214 239 ntBASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 AC006111.3-201ENST00000622137 383 ntBASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 API5P2-201ENST00000397055 1498 ntBASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 ZNF680P1-201ENST00000436625 1469 ntBASIC3.22□□□□□ -1.89
SLC6A13Q9NSD5 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
SLC6A13Q9NSD5 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 SNORA62.1-201ENST00000364287 154 ntBASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 RNU6-512P-201ENST00000364438 103 ntBASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 RNU6-1035P-201ENST00000384477 107 ntBASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 RNU6-1077P-201ENST00000410506 102 ntBASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 AF274854.1-201ENST00000413236 615 ntBASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 AC126124.2-201ENST00000413542 321 ntBASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 OR51A5P-201ENST00000415429 942 ntBASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 ATP5JP1-201ENST00000431631 322 ntBASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 OR2B8P-201ENST00000432841 938 ntBASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 HMGB3P11-201ENST00000440127 604 ntBASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 ATP5C1P1-201ENST00000441945 895 ntBASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 RPL23AP20-201ENST00000447965 421 ntBASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 FABP5P15-201ENST00000453566 214 ntBASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 HMGN1P18-201ENST00000457642 277 ntBASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 RNU7-182P-201ENST00000459009 62 ntBASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 AP002884.2-201ENST00000471647 395 ntBASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 PHBP14-201ENST00000512887 367 ntBASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 Y_RNA.689-201ENST00000516589 107 ntBASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 SCARNA20.6-201ENST00000517251 106 ntBASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 OR5AL2P-201ENST00000532185 920 ntBASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 HIGD1AP1-201ENST00000550979 275 ntBASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 AC005476.1-201ENST00000554427 397 ntBASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 AC006504.3-201ENST00000586818 523 ntBASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 AL021997.1-201ENST00000605757 193 ntBASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 AC008536.2-201ENST00000607284 349 ntBASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 AC130324.3-201ENST00000614165 542 ntBASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 AL121772.2-201ENST00000614331 297 ntBASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 MIR6075-201ENST00000620782 95 ntBASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SLC6A13Q9NSD5 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 AL359693.1-201ENST00000614959 2407 ntBASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 AC007496.3-201ENST00000624987 3443 ntBASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 RNA5SP124-201ENST00000362739 110 ntBASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 RNU6-140P-201ENST00000384566 108 ntBASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 AC080125.1-201ENST00000414888 684 ntBASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 AC093578.1-201ENST00000415219 368 ntBASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 ZNF885P-201ENST00000420174 1098 ntBASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 AL353193.1-201ENST00000421444 268 ntBASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 CYCSP4-201ENST00000429682 331 ntBASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 GPM6BP2-201ENST00000432046 144 ntBASIC3.2□□□□□ -1.9
SLC6A13Q9NSD5 GPM6BP1-201ENST00000446387 144 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms