Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC092954.2-201ENST00000609103 430 ntBASIC3.06□□□□□ -1.92
SIX2Q9NPC8 AC068944.2-201ENST00000610373 403 ntBASIC3.06□□□□□ -1.92
SIX2Q9NPC8 AL603758.1-201ENST00000618654 241 ntBASIC3.06□□□□□ -1.92
SIX2Q9NPC8 AL359880.1-201ENST00000621879 266 ntBASIC3.06□□□□□ -1.92
SIX2Q9NPC8 AC004925.1-201ENST00000624256 2706 ntBASIC3.06□□□□□ -1.92
SIX2Q9NPC8 AL136313.1-201ENST00000624804 202 ntBASIC3.06□□□□□ -1.92
SIX2Q9NPC8 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.06□□□□□ -1.92
SIX2Q9NPC8 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SIX2Q9NPC8 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SIX2Q9NPC8 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.05□□□□□ -1.92
SIX2Q9NPC8 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.05□□□□□ -1.92
SIX2Q9NPC8 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SIX2Q9NPC8 AL157700.1-201ENST00000561973 1432 ntBASIC3.05□□□□□ -1.92
SIX2Q9NPC8 Y_RNA.1-201ENST00000352915 104 ntBASIC3.05□□□□□ -1.92
SIX2Q9NPC8 RNU6-223P-201ENST00000362830 107 ntBASIC3.05□□□□□ -1.92
SIX2Q9NPC8 RNU6-511P-201ENST00000363496 107 ntBASIC3.05□□□□□ -1.92
SIX2Q9NPC8 RNY1P12-201ENST00000364251 105 ntBASIC3.05□□□□□ -1.92
SIX2Q9NPC8 Y_RNA.554-201ENST00000384672 102 ntBASIC3.05□□□□□ -1.92
SIX2Q9NPC8 CALM2P3-201ENST00000400429 449 ntBASIC3.05□□□□□ -1.92
SIX2Q9NPC8 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.05□□□□□ -1.92
SIX2Q9NPC8 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.05□□□□□ -1.92
SIX2Q9NPC8 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.05□□□□□ -1.92
SIX2Q9NPC8 MTCO2P19-201ENST00000427513 598 ntBASIC3.05□□□□□ -1.92
SIX2Q9NPC8 AC002486.1-201ENST00000435098 391 ntBASIC3.05□□□□□ -1.92
SIX2Q9NPC8 UBE2V1P8-201ENST00000437166 265 ntBASIC3.05□□□□□ -1.92
SIX2Q9NPC8 AC004866.2-201ENST00000438285 481 ntBASIC3.05□□□□□ -1.92
SIX2Q9NPC8 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.05□□□□□ -1.92
SIX2Q9NPC8 GAPDHP27-201ENST00000447427 1020 ntBASIC3.05□□□□□ -1.92
SIX2Q9NPC8 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.05□□□□□ -1.92
SIX2Q9NPC8 RPS24P6-201ENST00000452670 400 ntBASIC3.05□□□□□ -1.92
SIX2Q9NPC8 HMGB3P30-201ENST00000457863 606 ntBASIC3.05□□□□□ -1.92
SIX2Q9NPC8 RPS15AP36-201ENST00000492022 382 ntBASIC3.05□□□□□ -1.92
SIX2Q9NPC8 AC078918.1-201ENST00000498515 228 ntBASIC3.05□□□□□ -1.92
SIX2Q9NPC8 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.05□□□□□ -1.92
SIX2Q9NPC8 FTH1P9-201ENST00000513251 355 ntBASIC3.05□□□□□ -1.92
SIX2Q9NPC8 AC114797.1-201ENST00000514003 728 ntBASIC3.05□□□□□ -1.92
SIX2Q9NPC8 AC090572.1-201ENST00000519251 160 ntBASIC3.05□□□□□ -1.92
SIX2Q9NPC8 AP001893.2-201ENST00000526949 202 ntBASIC3.05□□□□□ -1.92
SIX2Q9NPC8 AP002404.1-201ENST00000532005 451 ntBASIC3.05□□□□□ -1.92
SIX2Q9NPC8 SNORD84-203ENST00000584275 78 ntBASIC3.05□□□□□ -1.92
SIX2Q9NPC8 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.05□□□□□ -1.92
SIX2Q9NPC8 AL391646.1-201ENST00000603860 190 ntBASIC3.05□□□□□ -1.92
SIX2Q9NPC8 AL022099.1-201ENST00000604551 712 ntBASIC3.05□□□□□ -1.92
SIX2Q9NPC8 TUG1_2.1-201ENST00000614234 87 ntBASIC3.05□□□□□ -1.92
SIX2Q9NPC8 AC090517.2-201ENST00000614966 680 ntBASIC3.05□□□□□ -1.92
SIX2Q9NPC8 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
SIX2Q9NPC8 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.05□□□□□ -1.92
SIX2Q9NPC8 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.05□□□□□ -1.92
SIX2Q9NPC8 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.05□□□□□ -1.92
SIX2Q9NPC8 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
SIX2Q9NPC8 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
SIX2Q9NPC8 DDX10P1-201ENST00000448545 1933 ntBASIC3.05□□□□□ -1.92
SIX2Q9NPC8 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SIX2Q9NPC8 CR848007.1-201ENST00000442354 1699 ntBASIC3.04□□□□□ -1.92
SIX2Q9NPC8 TAB3P1-202ENST00000452645 1634 ntBASIC3.04□□□□□ -1.92
SIX2Q9NPC8 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.04□□□□□ -1.92
SIX2Q9NPC8 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SIX2Q9NPC8 Y_RNA.159-201ENST00000363674 87 ntBASIC3.04□□□□□ -1.92
SIX2Q9NPC8 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
SIX2Q9NPC8 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
SIX2Q9NPC8 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.04□□□□□ -1.92
SIX2Q9NPC8 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.04□□□□□ -1.92
SIX2Q9NPC8 BMS1P22-201ENST00000414726 313 ntBASIC3.04□□□□□ -1.92
SIX2Q9NPC8 UBE2FP1-201ENST00000416536 447 ntBASIC3.04□□□□□ -1.92
SIX2Q9NPC8 PPP1R11P2-201ENST00000423543 382 ntBASIC3.04□□□□□ -1.92
SIX2Q9NPC8 AC003071.1-201ENST00000451219 789 ntBASIC3.04□□□□□ -1.92
SIX2Q9NPC8 AC013267.1-201ENST00000458227 267 ntBASIC3.04□□□□□ -1.92
SIX2Q9NPC8 snoU13.24-201ENST00000458998 104 ntBASIC3.04□□□□□ -1.92
SIX2Q9NPC8 AL049714.1-201ENST00000466686 347 ntBASIC3.04□□□□□ -1.92
SIX2Q9NPC8 AC023194.1-201ENST00000493084 308 ntBASIC3.04□□□□□ -1.92
SIX2Q9NPC8 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SIX2Q9NPC8 AC019235.1-201ENST00000503847 207 ntBASIC3.04□□□□□ -1.92
SIX2Q9NPC8 AC091826.1-201ENST00000514065 313 ntBASIC3.04□□□□□ -1.92
SIX2Q9NPC8 SCGB1D5P-201ENST00000515134 247 ntBASIC3.04□□□□□ -1.92
SIX2Q9NPC8 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.04□□□□□ -1.92
SIX2Q9NPC8 AC011979.2-201ENST00000527568 352 ntBASIC3.04□□□□□ -1.92
SIX2Q9NPC8 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.04□□□□□ -1.92
SIX2Q9NPC8 SUB1P2-201ENST00000556401 297 ntBASIC3.04□□□□□ -1.92
SIX2Q9NPC8 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.04□□□□□ -1.92
SIX2Q9NPC8 AC012182.1-201ENST00000570133 895 ntBASIC3.04□□□□□ -1.92
SIX2Q9NPC8 AC105224.1-201ENST00000587055 421 ntBASIC3.04□□□□□ -1.92
SIX2Q9NPC8 AC099778.2-201ENST00000610904 211 ntBASIC3.04□□□□□ -1.92
SIX2Q9NPC8 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
SIX2Q9NPC8 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
SIX2Q9NPC8 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.04□□□□□ -1.92
SIX2Q9NPC8 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SIX2Q9NPC8 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
SIX2Q9NPC8 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.03□□□□□ -1.92
SIX2Q9NPC8 SNORD56.2-201ENST00000363242 71 ntBASIC3.03□□□□□ -1.92
SIX2Q9NPC8 SNORA7.2-201ENST00000364446 145 ntBASIC3.03□□□□□ -1.92
SIX2Q9NPC8 RNU6-108P-201ENST00000365558 107 ntBASIC3.03□□□□□ -1.92
SIX2Q9NPC8 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SIX2Q9NPC8 AL138885.1-201ENST00000405921 675 ntBASIC3.03□□□□□ -1.92
SIX2Q9NPC8 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.03□□□□□ -1.92
SIX2Q9NPC8 MTCYBP5-201ENST00000423752 1135 ntBASIC3.03□□□□□ -1.92
SIX2Q9NPC8 USP9YP18-201ENST00000425912 695 ntBASIC3.03□□□□□ -1.92
SIX2Q9NPC8 MTCO1P39-201ENST00000426148 480 ntBASIC3.03□□□□□ -1.92
SIX2Q9NPC8 DPPA2P1-201ENST00000428060 556 ntBASIC3.03□□□□□ -1.92
SIX2Q9NPC8 TIMM9P3-201ENST00000428659 274 ntBASIC3.03□□□□□ -1.92
SIX2Q9NPC8 GPR143P-201ENST00000434155 205 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms