Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.33□□□□□ -1.72
CD248Q9HCU0 AC015911.1-201ENST00000495111 156 ntBASIC4.33□□□□□ -1.72
CD248Q9HCU0 Y_RNA.654-201ENST00000497848 106 ntBASIC4.33□□□□□ -1.72
CD248Q9HCU0 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.33□□□□□ -1.72
CD248Q9HCU0 AC116562.3-201ENST00000506136 177 ntBASIC4.33□□□□□ -1.72
CD248Q9HCU0 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.33□□□□□ -1.72
CD248Q9HCU0 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.33□□□□□ -1.72
CD248Q9HCU0 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.33□□□□□ -1.72
CD248Q9HCU0 RNA5SP503-201ENST00000517047 117 ntBASIC4.33□□□□□ -1.72
CD248Q9HCU0 MTND4P7-201ENST00000523876 130 ntBASIC4.33□□□□□ -1.72
CD248Q9HCU0 AC068587.5-201ENST00000528506 175 ntBASIC4.33□□□□□ -1.72
CD248Q9HCU0 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.33□□□□□ -1.72
CD248Q9HCU0 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.33□□□□□ -1.72
CD248Q9HCU0 TVP23BP1-201ENST00000557500 617 ntBASIC4.33□□□□□ -1.72
CD248Q9HCU0 UBE2L4-201ENST00000587688 464 ntBASIC4.33□□□□□ -1.72
CD248Q9HCU0 SNRPGP15-201ENST00000600149 222 ntBASIC4.33□□□□□ -1.72
CD248Q9HCU0 AL670379.11-201ENST00000604059 253 ntBASIC4.33□□□□□ -1.72
CD248Q9HCU0 AL670379.10-201ENST00000604330 253 ntBASIC4.33□□□□□ -1.72
CD248Q9HCU0 AL670379.12-201ENST00000605291 253 ntBASIC4.33□□□□□ -1.72
CD248Q9HCU0 AL670379.9-201ENST00000605428 253 ntBASIC4.33□□□□□ -1.72
CD248Q9HCU0 MIR486-1-201ENST00000612171 68 ntBASIC4.33□□□□□ -1.72
CD248Q9HCU0 AC012409.4-201ENST00000612923 249 ntBASIC4.33□□□□□ -1.72
CD248Q9HCU0 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.33□□□□□ -1.72
CD248Q9HCU0 AC112484.5-201ENST00000624189 228 ntBASIC4.33□□□□□ -1.72
CD248Q9HCU0 AC112200.1-201ENST00000625015 234 ntBASIC4.33□□□□□ -1.72
CD248Q9HCU0 NAA50-211ENST00000630058 177 ntTSL 5 BASIC4.33□□□□□ -1.72
CD248Q9HCU0 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CD248Q9HCU0 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CD248Q9HCU0 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.33□□□□□ -1.72
CD248Q9HCU0 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CD248Q9HCU0 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.32□□□□□ -1.72
CD248Q9HCU0 AC011460.1-201ENST00000636268 1834 ntBASIC4.32□□□□□ -1.72
CD248Q9HCU0 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CD248Q9HCU0 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CD248Q9HCU0 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CD248Q9HCU0 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CD248Q9HCU0 RNU6-97P-201ENST00000363387 104 ntBASIC4.32□□□□□ -1.72
CD248Q9HCU0 RNU6-379P-201ENST00000363813 104 ntBASIC4.32□□□□□ -1.72
CD248Q9HCU0 RNU6-335P-201ENST00000364563 113 ntBASIC4.32□□□□□ -1.72
CD248Q9HCU0 Y_RNA.364-201ENST00000365532 101 ntBASIC4.32□□□□□ -1.72
CD248Q9HCU0 SET-203ENST00000372688 801 ntTSL 2 BASIC4.32□□□□□ -1.72
CD248Q9HCU0 RNU6-641P-201ENST00000384006 107 ntBASIC4.32□□□□□ -1.72
CD248Q9HCU0 RNU6-310P-201ENST00000384655 107 ntBASIC4.32□□□□□ -1.72
CD248Q9HCU0 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CD248Q9HCU0 U3.20-201ENST00000390909 217 ntBASIC4.32□□□□□ -1.72
CD248Q9HCU0 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.32□□□□□ -1.72
CD248Q9HCU0 RNU2-3P-201ENST00000410144 191 ntBASIC4.32□□□□□ -1.72
CD248Q9HCU0 RNU4-61P-201ENST00000411243 107 ntBASIC4.32□□□□□ -1.72
CD248Q9HCU0 BX323014.1-201ENST00000412876 237 ntBASIC4.32□□□□□ -1.72
CD248Q9HCU0 AC068533.1-201ENST00000418542 415 ntBASIC4.32□□□□□ -1.72
CD248Q9HCU0 COX6B1P7-201ENST00000430845 235 ntBASIC4.32□□□□□ -1.72
CD248Q9HCU0 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CD248Q9HCU0 AC005019.1-201ENST00000436455 431 ntBASIC4.32□□□□□ -1.72
CD248Q9HCU0 AC108734.1-201ENST00000439549 399 ntBASIC4.32□□□□□ -1.72
CD248Q9HCU0 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.32□□□□□ -1.72
CD248Q9HCU0 AL118520.1-201ENST00000450770 291 ntBASIC4.32□□□□□ -1.72
CD248Q9HCU0 SLC25A15P5-201ENST00000508033 253 ntBASIC4.32□□□□□ -1.72
CD248Q9HCU0 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.32□□□□□ -1.72
CD248Q9HCU0 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.32□□□□□ -1.72
CD248Q9HCU0 AC009812.2-201ENST00000517657 457 ntBASIC4.32□□□□□ -1.72
CD248Q9HCU0 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
CD248Q9HCU0 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.32□□□□□ -1.72
CD248Q9HCU0 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.32□□□□□ -1.72
CD248Q9HCU0 MIR4703-201ENST00000577728 79 ntBASIC4.32□□□□□ -1.72
CD248Q9HCU0 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.32□□□□□ -1.72
CD248Q9HCU0 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.32□□□□□ -1.72
CD248Q9HCU0 AL160290.3-201ENST00000604869 165 ntBASIC4.32□□□□□ -1.72
CD248Q9HCU0 AL365434.2-201ENST00000607979 234 ntBASIC4.32□□□□□ -1.72
CD248Q9HCU0 AC004696.1-201ENST00000614345 607 ntBASIC4.32□□□□□ -1.72
CD248Q9HCU0 AC007485.1-201ENST00000616755 206 ntBASIC4.32□□□□□ -1.72
CD248Q9HCU0 AC008013.2-202ENST00000637965 364 ntBASIC4.32□□□□□ -1.72
CD248Q9HCU0 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CD248Q9HCU0 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.32□□□□□ -1.72
CD248Q9HCU0 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.32□□□□□ -1.72
CD248Q9HCU0 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CD248Q9HCU0 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.32□□□□□ -1.72
CD248Q9HCU0 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.32□□□□□ -1.72
CD248Q9HCU0 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CD248Q9HCU0 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CD248Q9HCU0 AC121333.1-201ENST00000567488 2709 ntBASIC4.31□□□□□ -1.72
CD248Q9HCU0 AC244517.1-201ENST00000606030 2086 ntBASIC4.31□□□□□ -1.72
CD248Q9HCU0 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.31□□□□□ -1.72
CD248Q9HCU0 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.31□□□□□ -1.72
CD248Q9HCU0 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
CD248Q9HCU0 Y_RNA.167-201ENST00000363735 109 ntBASIC4.31□□□□□ -1.72
CD248Q9HCU0 RNA5SP175-201ENST00000364275 119 ntBASIC4.31□□□□□ -1.72
CD248Q9HCU0 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CD248Q9HCU0 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CD248Q9HCU0 DEFB109C-201ENST00000382575 264 ntBASIC4.31□□□□□ -1.72
CD248Q9HCU0 DEFB109B-201ENST00000382656 264 ntBASIC4.31□□□□□ -1.72
CD248Q9HCU0 RNU6-601P-201ENST00000384540 107 ntBASIC4.31□□□□□ -1.72
CD248Q9HCU0 Y_RNA.574-201ENST00000384766 95 ntBASIC4.31□□□□□ -1.72
CD248Q9HCU0 AL024474.1-201ENST00000404655 591 ntBASIC4.31□□□□□ -1.72
CD248Q9HCU0 SKA2P1-201ENST00000425592 390 ntBASIC4.31□□□□□ -1.72
CD248Q9HCU0 AL590233.1-201ENST00000430017 456 ntBASIC4.31□□□□□ -1.72
CD248Q9HCU0 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.31□□□□□ -1.72
CD248Q9HCU0 HMGB1P12-201ENST00000438594 598 ntBASIC4.31□□□□□ -1.72
CD248Q9HCU0 AL356535.1-201ENST00000440335 398 ntBASIC4.31□□□□□ -1.72
CD248Q9HCU0 RPL23AP81-201ENST00000455252 467 ntBASIC4.31□□□□□ -1.72
CD248Q9HCU0 snoU13.8-201ENST00000458890 104 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 174.9 ms