Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 MIR4715-201ENST00000584117 79 ntBASIC3.97□□□□□ -1.77
SEC61A2Q9H9S3 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.97□□□□□ -1.77
SEC61A2Q9H9S3 AC078899.3-201ENST00000599065 212 ntBASIC3.97□□□□□ -1.77
SEC61A2Q9H9S3 MIR6130-201ENST00000619419 109 ntBASIC3.97□□□□□ -1.77
SEC61A2Q9H9S3 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SEC61A2Q9H9S3 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
SEC61A2Q9H9S3 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
SEC61A2Q9H9S3 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SEC61A2Q9H9S3 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC3.97□□□□□ -1.77
SEC61A2Q9H9S3 CPHL1P-201ENST00000461341 3407 ntBASIC3.96□□□□□ -1.77
SEC61A2Q9H9S3 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.96□□□□□ -1.77
SEC61A2Q9H9S3 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.96□□□□□ -1.77
SEC61A2Q9H9S3 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 Y_RNA.126-201ENST00000363382 111 ntBASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 RNU1-32P-201ENST00000363937 159 ntBASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 RNY3P11-201ENST00000364153 102 ntBASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 RNA5SP151-201ENST00000365632 117 ntBASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 SNORA41-201ENST00000384675 132 ntBASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 MIR129-1-201ENST00000384972 72 ntBASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 BX842559.1-201ENST00000419615 532 ntBASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 HMGB1P9-201ENST00000429856 646 ntBASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 AL353997.1-201ENST00000432936 108 ntBASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 AC099799.1-201ENST00000439809 192 ntBASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 SUMO1P3-201ENST00000439961 304 ntBASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 AL353748.1-201ENST00000440753 474 ntBASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 OSTCP8-201ENST00000445117 448 ntBASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 CHEK2P4-201ENST00000450340 246 ntBASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 AC009220.1-201ENST00000451614 275 ntBASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 AC112492.4-201ENST00000456549 352 ntBASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 RNU7-138P-201ENST00000459479 64 ntBASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 RPL21P126-201ENST00000470049 478 ntBASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 VWA8P1-201ENST00000510889 176 ntBASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 RN7SKP82-201ENST00000516786 223 ntBASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 AC126177.3-201ENST00000551839 688 ntBASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 OR4H12P-201ENST00000556269 907 ntBASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 AC174048.1-201ENST00000603389 144 ntBASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 AL139395.1-201ENST00000603662 160 ntBASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 AL355297.3-201ENST00000604082 446 ntBASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 RNU6-85P-201ENST00000605989 107 ntBASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 MIR8062-201ENST00000621515 85 ntBASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
SEC61A2Q9H9S3 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 RAD17P1-201ENST00000418130 2042 ntBASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 RNU6-874P-201ENST00000362390 105 ntBASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 Y_RNA.222-201ENST00000364264 102 ntBASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 SNORD14.1-201ENST00000365609 90 ntBASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 U3.22-201ENST00000391120 215 ntBASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 AC097374.1-203ENST00000400783 485 ntBASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 AL603908.1-201ENST00000406098 201 ntBASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 BX276092.3-201ENST00000424182 230 ntBASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 AL645568.3-201ENST00000433683 316 ntBASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 ELOCP18-201ENST00000434209 337 ntBASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 AC090774.1-201ENST00000435925 246 ntBASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 TPT1P13-201ENST00000449760 499 ntBASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 AL031274.1-201ENST00000450334 232 ntBASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 RPS24P6-201ENST00000452670 400 ntBASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 snoU13.1-201ENST00000459157 104 ntBASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 RPL21P41-201ENST00000459863 264 ntBASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 AC022447.4-201ENST00000504053 364 ntBASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 RNU6-475P-201ENST00000516073 104 ntBASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 RNU6-1095P-201ENST00000516148 108 ntBASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 RNU6-840P-201ENST00000517275 65 ntBASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 AC090151.1-201ENST00000520784 730 ntBASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 ERHP1-201ENST00000523006 310 ntBASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 AC009643.1-201ENST00000532030 391 ntBASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.95□□□□□ -1.78
SEC61A2Q9H9S3 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms