Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 AP000860.1-201ENST00000605250 559 ntBASIC3.01□□□□□ -1.93
SNX25Q9H3E2 AC121334.2-201ENST00000605387 271 ntBASIC3.01□□□□□ -1.93
SNX25Q9H3E2 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.01□□□□□ -1.93
SNX25Q9H3E2 AC103710.1-201ENST00000610003 901 ntBASIC3.01□□□□□ -1.93
SNX25Q9H3E2 AL020991.1-201ENST00000612314 373 ntBASIC3.01□□□□□ -1.93
SNX25Q9H3E2 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.01□□□□□ -1.93
SNX25Q9H3E2 AC025048.6-202ENST00000627667 438 ntBASIC3.01□□□□□ -1.93
SNX25Q9H3E2 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.01□□□□□ -1.93
SNX25Q9H3E2 LRRC77P-213ENST00000637727 880 ntBASIC3.01□□□□□ -1.93
SNX25Q9H3E2 OR5H6-203ENST00000642105 978 ntBASIC3.01□□□□□ -1.93
SNX25Q9H3E2 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
SNX25Q9H3E2 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SNX25Q9H3E2 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.01□□□□□ -1.93
SNX25Q9H3E2 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SNX25Q9H3E2 TPTE2P4-201ENST00000258589 1605 ntBASIC3.01□□□□□ -1.93
SNX25Q9H3E2 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3□□□□□ -1.93
SNX25Q9H3E2 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3□□□□□ -1.93
SNX25Q9H3E2 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
SNX25Q9H3E2 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3□□□□□ -1.93
SNX25Q9H3E2 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SNX25Q9H3E2 U3.4-201ENST00000363352 213 ntBASIC3□□□□□ -1.93
SNX25Q9H3E2 RNU6-511P-201ENST00000363496 107 ntBASIC3□□□□□ -1.93
SNX25Q9H3E2 SNORA14A-201ENST00000364773 135 ntBASIC3□□□□□ -1.93
SNX25Q9H3E2 AL122016.1-201ENST00000403365 367 ntBASIC3□□□□□ -1.93
SNX25Q9H3E2 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3□□□□□ -1.93
SNX25Q9H3E2 FCF1P1-201ENST00000432690 571 ntBASIC3□□□□□ -1.93
SNX25Q9H3E2 RPL23AP20-201ENST00000447965 421 ntBASIC3□□□□□ -1.93
SNX25Q9H3E2 AC010099.1-201ENST00000455434 375 ntBASIC3□□□□□ -1.93
SNX25Q9H3E2 RNU6-420P-201ENST00000458780 107 ntBASIC3□□□□□ -1.93
SNX25Q9H3E2 AP004217.1-201ENST00000480579 346 ntBASIC3□□□□□ -1.93
SNX25Q9H3E2 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3□□□□□ -1.93
SNX25Q9H3E2 AC091826.1-201ENST00000514065 313 ntBASIC3□□□□□ -1.93
SNX25Q9H3E2 AP003467.2-201ENST00000520175 319 ntBASIC3□□□□□ -1.93
SNX25Q9H3E2 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3□□□□□ -1.93
SNX25Q9H3E2 TRAV28-201ENST00000557548 323 ntBASIC3□□□□□ -1.93
SNX25Q9H3E2 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3□□□□□ -1.93
SNX25Q9H3E2 MTCO3P24-201ENST00000572729 782 ntBASIC3□□□□□ -1.93
SNX25Q9H3E2 AC009977.1-201ENST00000586015 570 ntBASIC3□□□□□ -1.93
SNX25Q9H3E2 AC110760.3-201ENST00000598794 467 ntBASIC3□□□□□ -1.93
SNX25Q9H3E2 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3□□□□□ -1.93
SNX25Q9H3E2 AL359999.1-201ENST00000604513 294 ntBASIC3□□□□□ -1.93
SNX25Q9H3E2 AL033523.1-201ENST00000605153 153 ntBASIC3□□□□□ -1.93
SNX25Q9H3E2 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3□□□□□ -1.93
SNX25Q9H3E2 RNU6-87P-201ENST00000607561 108 ntBASIC3□□□□□ -1.93
SNX25Q9H3E2 AC239868.4-201ENST00000608318 671 ntBASIC3□□□□□ -1.93
SNX25Q9H3E2 AC090115.4-201ENST00000609970 188 ntBASIC3□□□□□ -1.93
SNX25Q9H3E2 AC010338.1-201ENST00000621823 717 ntBASIC3□□□□□ -1.93
SNX25Q9H3E2 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3□□□□□ -1.93
SNX25Q9H3E2 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3□□□□□ -1.93
SNX25Q9H3E2 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3□□□□□ -1.93
SNX25Q9H3E2 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3□□□□□ -1.93
SNX25Q9H3E2 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.99□□□□□ -1.93
SNX25Q9H3E2 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.99□□□□□ -1.93
SNX25Q9H3E2 AC092593.1-201ENST00000515413 1815 ntBASIC2.99□□□□□ -1.93
SNX25Q9H3E2 OR5J1P-201ENST00000313544 939 ntBASIC2.99□□□□□ -1.93
SNX25Q9H3E2 RPL9P7-201ENST00000330965 580 ntBASIC2.99□□□□□ -1.93
SNX25Q9H3E2 FCF1P10-201ENST00000407590 479 ntBASIC2.99□□□□□ -1.93
SNX25Q9H3E2 RNU2-33P-201ENST00000410344 192 ntBASIC2.99□□□□□ -1.93
SNX25Q9H3E2 Y_RNA.598-201ENST00000410480 95 ntBASIC2.99□□□□□ -1.93
SNX25Q9H3E2 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.99□□□□□ -1.93
SNX25Q9H3E2 ELOCP17-201ENST00000414751 326 ntBASIC2.99□□□□□ -1.93
SNX25Q9H3E2 AC019097.1-201ENST00000424783 735 ntBASIC2.99□□□□□ -1.93
SNX25Q9H3E2 AL512844.2-201ENST00000433990 593 ntBASIC2.99□□□□□ -1.93
SNX25Q9H3E2 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.99□□□□□ -1.93
SNX25Q9H3E2 AC105272.1-201ENST00000438604 198 ntBASIC2.99□□□□□ -1.93
SNX25Q9H3E2 MTND2P4-201ENST00000445034 1004 ntBASIC2.99□□□□□ -1.93
SNX25Q9H3E2 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.99□□□□□ -1.93
SNX25Q9H3E2 AL049873.1-201ENST00000480540 376 ntBASIC2.99□□□□□ -1.93
SNX25Q9H3E2 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.99□□□□□ -1.93
SNX25Q9H3E2 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.99□□□□□ -1.93
SNX25Q9H3E2 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.99□□□□□ -1.93
SNX25Q9H3E2 RNU6-927P-201ENST00000516199 100 ntBASIC2.99□□□□□ -1.93
SNX25Q9H3E2 SNORD59.2-201ENST00000516873 68 ntBASIC2.99□□□□□ -1.93
SNX25Q9H3E2 RNU6-928P-201ENST00000516876 104 ntBASIC2.99□□□□□ -1.93
SNX25Q9H3E2 RN7SKP258-201ENST00000517151 304 ntBASIC2.99□□□□□ -1.93
SNX25Q9H3E2 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.99□□□□□ -1.93
SNX25Q9H3E2 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.99□□□□□ -1.93
SNX25Q9H3E2 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.99□□□□□ -1.93
SNX25Q9H3E2 ARL2BPP2-201ENST00000550907 489 ntBASIC2.99□□□□□ -1.93
SNX25Q9H3E2 RPL21P5-201ENST00000554662 472 ntBASIC2.99□□□□□ -1.93
SNX25Q9H3E2 GTF3AP2-201ENST00000557014 266 ntBASIC2.99□□□□□ -1.93
SNX25Q9H3E2 HMGB1P14-201ENST00000557424 591 ntBASIC2.99□□□□□ -1.93
SNX25Q9H3E2 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.99□□□□□ -1.93
SNX25Q9H3E2 ZNF861P-201ENST00000588126 639 ntBASIC2.99□□□□□ -1.93
SNX25Q9H3E2 AC002545.1-201ENST00000592511 181 ntBASIC2.99□□□□□ -1.93
SNX25Q9H3E2 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.99□□□□□ -1.93
SNX25Q9H3E2 DPPA3P3-201ENST00000603842 430 ntBASIC2.99□□□□□ -1.93
SNX25Q9H3E2 AC008277.2-201ENST00000605196 797 ntBASIC2.99□□□□□ -1.93
SNX25Q9H3E2 OR2AS2P-201ENST00000606902 342 ntBASIC2.99□□□□□ -1.93
SNX25Q9H3E2 AC091304.9-201ENST00000612091 226 ntBASIC2.99□□□□□ -1.93
SNX25Q9H3E2 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.99□□□□□ -1.93
SNX25Q9H3E2 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
SNX25Q9H3E2 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.99□□□□□ -1.93
SNX25Q9H3E2 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SNX25Q9H3E2 AL161431.1-201ENST00000618966 4205 ntBASIC2.98□□□□□ -1.93
SNX25Q9H3E2 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SNX25Q9H3E2 AC092447.7-201ENST00000422212 1621 ntBASIC2.98□□□□□ -1.93
SNX25Q9H3E2 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.98□□□□□ -1.93
SNX25Q9H3E2 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SNX25Q9H3E2 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 160.1 ms