Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.74□□□□□ -1.97
DDX47Q9H0S4 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
DDX47Q9H0S4 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.73□□□□□ -1.97
DDX47Q9H0S4 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
DDX47Q9H0S4 MTND5P29-201ENST00000458676 1807 ntBASIC2.73□□□□□ -1.97
DDX47Q9H0S4 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
DDX47Q9H0S4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.73□□□□□ -1.97
DDX47Q9H0S4 MIR6073-201ENST00000352083 89 ntBASIC2.73□□□□□ -1.97
DDX47Q9H0S4 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
DDX47Q9H0S4 RPS27AP14-201ENST00000422868 454 ntBASIC2.73□□□□□ -1.97
DDX47Q9H0S4 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.73□□□□□ -1.97
DDX47Q9H0S4 RPL35AP12-201ENST00000425362 338 ntBASIC2.73□□□□□ -1.97
DDX47Q9H0S4 SKA2P1-201ENST00000425592 390 ntBASIC2.73□□□□□ -1.97
DDX47Q9H0S4 RPS15AP5-201ENST00000436276 388 ntBASIC2.73□□□□□ -1.97
DDX47Q9H0S4 AL008629.1-201ENST00000438615 184 ntBASIC2.73□□□□□ -1.97
DDX47Q9H0S4 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.73□□□□□ -1.97
DDX47Q9H0S4 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
DDX47Q9H0S4 SEM1P1-201ENST00000506694 209 ntBASIC2.73□□□□□ -1.97
DDX47Q9H0S4 SNORA31.3-201ENST00000516029 96 ntBASIC2.73□□□□□ -1.97
DDX47Q9H0S4 AC026241.1-201ENST00000517873 2142 ntBASIC2.73□□□□□ -1.97
DDX47Q9H0S4 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.73□□□□□ -1.97
DDX47Q9H0S4 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.73□□□□□ -1.97
DDX47Q9H0S4 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.73□□□□□ -1.97
DDX47Q9H0S4 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.73□□□□□ -1.97
DDX47Q9H0S4 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.73□□□□□ -1.97
DDX47Q9H0S4 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.73□□□□□ -1.97
DDX47Q9H0S4 AC060766.3-201ENST00000591442 263 ntBASIC2.73□□□□□ -1.97
DDX47Q9H0S4 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.73□□□□□ -1.97
DDX47Q9H0S4 AC090970.3-201ENST00000612566 866 ntBASIC2.73□□□□□ -1.97
DDX47Q9H0S4 U2.21-201ENST00000637295 81 ntBASIC2.73□□□□□ -1.97
DDX47Q9H0S4 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.73□□□□□ -1.97
DDX47Q9H0S4 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
DDX47Q9H0S4 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
DDX47Q9H0S4 SNORD56.5-201ENST00000364281 72 ntBASIC2.72□□□□□ -1.97
DDX47Q9H0S4 RNU1-109P-201ENST00000383960 147 ntBASIC2.72□□□□□ -1.97
DDX47Q9H0S4 SNORA48.2-201ENST00000390926 124 ntBASIC2.72□□□□□ -1.97
DDX47Q9H0S4 NDUFS5P1-201ENST00000405668 289 ntBASIC2.72□□□□□ -1.97
DDX47Q9H0S4 RNU2-49P-201ENST00000410666 184 ntBASIC2.72□□□□□ -1.97
DDX47Q9H0S4 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.72□□□□□ -1.97
DDX47Q9H0S4 AC104454.1-201ENST00000421341 1401 ntBASIC2.72□□□□□ -1.97
DDX47Q9H0S4 MTCO2P17-201ENST00000424336 677 ntBASIC2.72□□□□□ -1.97
DDX47Q9H0S4 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.72□□□□□ -1.97
DDX47Q9H0S4 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.72□□□□□ -1.97
DDX47Q9H0S4 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.72□□□□□ -1.97
DDX47Q9H0S4 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.72□□□□□ -1.97
DDX47Q9H0S4 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.72□□□□□ -1.97
DDX47Q9H0S4 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
DDX47Q9H0S4 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.72□□□□□ -1.97
DDX47Q9H0S4 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.72□□□□□ -1.97
DDX47Q9H0S4 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.72□□□□□ -1.97
DDX47Q9H0S4 RPS27AP10-201ENST00000496103 208 ntBASIC2.72□□□□□ -1.97
DDX47Q9H0S4 AC116347.2-201ENST00000514912 523 ntBASIC2.72□□□□□ -1.97
DDX47Q9H0S4 RNU6-678P-201ENST00000516832 109 ntBASIC2.72□□□□□ -1.97
DDX47Q9H0S4 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.72□□□□□ -1.97
DDX47Q9H0S4 CKS1BP7-201ENST00000522230 235 ntBASIC2.72□□□□□ -1.97
DDX47Q9H0S4 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.72□□□□□ -1.97
DDX47Q9H0S4 AC123904.2-201ENST00000548059 300 ntBASIC2.72□□□□□ -1.97
DDX47Q9H0S4 AC002400.1-201ENST00000569310 726 ntBASIC2.72□□□□□ -1.97
DDX47Q9H0S4 MIR4760-201ENST00000585040 80 ntBASIC2.72□□□□□ -1.97
DDX47Q9H0S4 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.72□□□□□ -1.97
DDX47Q9H0S4 KC877982.1-201ENST00000602313 470 ntBASIC2.72□□□□□ -1.97
DDX47Q9H0S4 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.72□□□□□ -1.97
DDX47Q9H0S4 AC092192.1-201ENST00000633154 1018 ntBASIC2.72□□□□□ -1.97
DDX47Q9H0S4 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
DDX47Q9H0S4 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
DDX47Q9H0S4 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
DDX47Q9H0S4 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.72□□□□□ -1.97
DDX47Q9H0S4 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.71□□□□□ -1.97
DDX47Q9H0S4 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.71□□□□□ -1.98
DDX47Q9H0S4 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.71□□□□□ -1.98
DDX47Q9H0S4 RNU6-1180P-201ENST00000364935 107 ntBASIC2.71□□□□□ -1.98
DDX47Q9H0S4 SET-203ENST00000372688 801 ntTSL 2 BASIC2.71□□□□□ -1.98
DDX47Q9H0S4 RNU6-809P-201ENST00000384461 107 ntBASIC2.71□□□□□ -1.98
DDX47Q9H0S4 MIR627-201ENST00000384979 97 ntBASIC2.71□□□□□ -1.98
DDX47Q9H0S4 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.71□□□□□ -1.98
DDX47Q9H0S4 UBA52P6-201ENST00000399822 382 ntBASIC2.71□□□□□ -1.98
DDX47Q9H0S4 AL356057.3-201ENST00000402607 340 ntBASIC2.71□□□□□ -1.98
DDX47Q9H0S4 AL513475.1-201ENST00000406602 315 ntBASIC2.71□□□□□ -1.98
DDX47Q9H0S4 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.71□□□□□ -1.98
DDX47Q9H0S4 AC096664.2-201ENST00000411843 406 ntBASIC2.71□□□□□ -1.98
DDX47Q9H0S4 AL096701.2-201ENST00000416920 238 ntBASIC2.71□□□□□ -1.98
DDX47Q9H0S4 ZNF90P2-204ENST00000419323 1075 ntBASIC2.71□□□□□ -1.98
DDX47Q9H0S4 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.71□□□□□ -1.98
DDX47Q9H0S4 BPY2DP-201ENST00000422208 265 ntBASIC2.71□□□□□ -1.98
DDX47Q9H0S4 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.71□□□□□ -1.98
DDX47Q9H0S4 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.71□□□□□ -1.98
DDX47Q9H0S4 RPL37P21-201ENST00000435890 276 ntBASIC2.71□□□□□ -1.98
DDX47Q9H0S4 CR769767.1-201ENST00000436337 346 ntBASIC2.71□□□□□ -1.98
DDX47Q9H0S4 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.71□□□□□ -1.98
DDX47Q9H0S4 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.71□□□□□ -1.98
DDX47Q9H0S4 RPS24P13-201ENST00000442520 397 ntBASIC2.71□□□□□ -1.98
DDX47Q9H0S4 AL591719.1-201ENST00000444669 744 ntBASIC2.71□□□□□ -1.98
DDX47Q9H0S4 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.71□□□□□ -1.98
DDX47Q9H0S4 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.71□□□□□ -1.98
DDX47Q9H0S4 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.71□□□□□ -1.98
DDX47Q9H0S4 AC107626.1-201ENST00000471084 183 ntBASIC2.71□□□□□ -1.98
DDX47Q9H0S4 AC126182.1-201ENST00000478134 357 ntBASIC2.71□□□□□ -1.98
DDX47Q9H0S4 RPL23AP70-201ENST00000483361 460 ntBASIC2.71□□□□□ -1.98
DDX47Q9H0S4 LINC00888-204ENST00000487386 421 ntBASIC2.71□□□□□ -1.98
DDX47Q9H0S4 HIGD1AP13-201ENST00000509878 289 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms