Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 RN7SKP280-201ENST00000364196 304 ntBASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 SNORA70.4-201ENST00000365509 134 ntBASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 SNORA36C-201ENST00000384289 132 ntBASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 SNORD70.1-201ENST00000391007 85 ntBASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 EIF4E2P1-201ENST00000393781 255 ntBASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 AL138878.1-201ENST00000405131 347 ntBASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 Z98941.1-201ENST00000407764 100 ntBASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 MIR1302-11-201ENST00000408051 138 ntBASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 MIR1302-9-201ENST00000408365 138 ntBASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 MIR1302-10-201ENST00000408734 138 ntBASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 RNU6ATAC-201ENST00000408749 126 ntBASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 RHEBP3-201ENST00000411920 351 ntBASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 AC079780.1-201ENST00000428259 207 ntBASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 AC104058.1-201ENST00000448028 297 ntBASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 AL118496.2-201ENST00000448300 230 ntBASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 MLLT10P2-201ENST00000506434 249 ntBASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 SNORA31.3-201ENST00000516029 96 ntBASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 SNORA31.20-201ENST00000517111 133 ntBASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 AP004371.1-201ENST00000525240 214 ntBASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 AP000889.1-201ENST00000530968 660 ntBASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 AC025884.1-201ENST00000556034 378 ntBASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 AC012182.1-201ENST00000570133 895 ntBASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 AC025627.2-201ENST00000576220 160 ntBASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 FAM60BP-201ENST00000578364 658 ntBASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 MIR3942-201ENST00000585264 109 ntBASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 BDH2P1-201ENST00000602288 736 ntBASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 DPPA3P3-201ENST00000603842 430 ntBASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 AL591034.3-201ENST00000605511 685 ntBASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 MIR1302-2-201ENST00000607096 138 ntBASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 DUSP12P1-201ENST00000612874 516 ntBASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 MIR7151-201ENST00000617477 60 ntBASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 AC103705.1-201ENST00000619013 241 ntBASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 AC244205.2-202ENST00000635781 342 ntBASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 RNU6-254P-201ENST00000363377 107 ntBASIC3.71□□□□□ -1.82
AMBRA1Q9C0C7 RNU6-288P-201ENST00000363690 104 ntBASIC3.71□□□□□ -1.82
AMBRA1Q9C0C7 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.71□□□□□ -1.82
AMBRA1Q9C0C7 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.71□□□□□ -1.82
AMBRA1Q9C0C7 RNU6-190P-201ENST00000384154 102 ntBASIC3.71□□□□□ -1.82
AMBRA1Q9C0C7 RNU6-393P-201ENST00000384475 107 ntBASIC3.71□□□□□ -1.82
AMBRA1Q9C0C7 CISD1P1-201ENST00000393907 327 ntBASIC3.71□□□□□ -1.82
AMBRA1Q9C0C7 SNORA11.2-201ENST00000408318 127 ntBASIC3.71□□□□□ -1.82
AMBRA1Q9C0C7 MIR1251-201ENST00000408552 70 ntBASIC3.71□□□□□ -1.82
AMBRA1Q9C0C7 RNA5SP317-201ENST00000410176 116 ntBASIC3.71□□□□□ -1.82
AMBRA1Q9C0C7 RNA5SP311-201ENST00000411290 116 ntBASIC3.71□□□□□ -1.82
AMBRA1Q9C0C7 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.71□□□□□ -1.82
AMBRA1Q9C0C7 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.71□□□□□ -1.82
AMBRA1Q9C0C7 AC018644.1-201ENST00000429934 551 ntBASIC3.71□□□□□ -1.82
AMBRA1Q9C0C7 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.71□□□□□ -1.82
AMBRA1Q9C0C7 HSPE1P6-201ENST00000479457 291 ntBASIC3.71□□□□□ -1.82
AMBRA1Q9C0C7 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
AMBRA1Q9C0C7 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.71□□□□□ -1.82
AMBRA1Q9C0C7 RNU6-189P-201ENST00000516120 101 ntBASIC3.71□□□□□ -1.82
AMBRA1Q9C0C7 RNA5SP315-201ENST00000516340 116 ntBASIC3.71□□□□□ -1.82
AMBRA1Q9C0C7 Y_RNA.682-201ENST00000516457 100 ntBASIC3.71□□□□□ -1.82
AMBRA1Q9C0C7 RNU6-1088P-201ENST00000516850 104 ntBASIC3.71□□□□□ -1.82
AMBRA1Q9C0C7 RNA5SP312-201ENST00000517068 116 ntBASIC3.71□□□□□ -1.82
AMBRA1Q9C0C7 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.71□□□□□ -1.82
AMBRA1Q9C0C7 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.71□□□□□ -1.82
AMBRA1Q9C0C7 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.71□□□□□ -1.82
AMBRA1Q9C0C7 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.71□□□□□ -1.82
AMBRA1Q9C0C7 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.71□□□□□ -1.82
AMBRA1Q9C0C7 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.71□□□□□ -1.82
AMBRA1Q9C0C7 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.71□□□□□ -1.82
AMBRA1Q9C0C7 AL133255.1-201ENST00000606374 441 ntBASIC3.71□□□□□ -1.82
AMBRA1Q9C0C7 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.71□□□□□ -1.82
AMBRA1Q9C0C7 AL591424.2-201ENST00000617023 128 ntBASIC3.71□□□□□ -1.82
AMBRA1Q9C0C7 MTND5P42-201ENST00000637720 498 ntBASIC3.71□□□□□ -1.82
AMBRA1Q9C0C7 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
AMBRA1Q9C0C7 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.71□□□□□ -1.82
AMBRA1Q9C0C7 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
AMBRA1Q9C0C7 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
AMBRA1Q9C0C7 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
AMBRA1Q9C0C7 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 RNU6-1252P-201ENST00000363054 104 ntBASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 RNU6-173P-201ENST00000364215 104 ntBASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 Y_RNA.339-201ENST00000365325 102 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms